RNA–Protein interactions for RNA: ENST00000578961.5

GRB2-208, Transcript of growth factor receptor bound protein 2, human

TSL 3 BASIC

Gene GRB2, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRB2-208	ENST00000578961	FAM98C	Q17RN3	349 aa	Known RBP	13.8	□□□□□ -0.2
GRB2-208	ENST00000578961	AMOT	Q4VCS5	1084 aa		13.8	□□□□□ -0.2
GRB2-208	ENST00000578961	SULT6B1	Q6IMI4	303 aa		13.8	□□□□□ -0.2
GRB2-208	ENST00000578961	RSPH6A	Q9H0K4	717 aa		13.8	□□□□□ -0.2
GRB2-208	ENST00000578961	NHS	Q6T4R5	1651 aa		13.79	□□□□□ -0.2
GRB2-208	ENST00000578961	EP400	Q96L91	3159 aa		13.79	□□□□□ -0.2
GRB2-208	ENST00000578961	U2SURP	O15042	1029 aa	Known RBP	13.78	□□□□□ -0.2
GRB2-208	ENST00000578961	DDB1	Q16531	1140 aa		13.78	□□□□□ -0.2
GRB2-208	ENST00000578961	SEPT12	Q8IYM1	358 aa		13.78	□□□□□ -0.2
GRB2-208	ENST00000578961	PNISR	Q8TF01	805 aa	Known RBP	13.78	□□□□□ -0.2
GRB2-208	ENST00000578961	MRS2	Q9HD23	443 aa		13.78	□□□□□ -0.2
GRB2-208	ENST00000578961	USP35	Q9P2H5	1018 aa		13.78	□□□□□ -0.2
GRB2-208	ENST00000578961	PCDH11X	Q9BZA7	1347 aa		13.78	□□□□□ -0.2
GRB2-208	ENST00000578961	PCDH11Y	Q9BZA8	1340 aa		13.78	□□□□□ -0.2
GRB2-208	ENST00000578961	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.77	□□□□□ -0.21
GRB2-208	ENST00000578961	SIPA1L3	O60292	1781 aa	Predicted RBP	13.77	□□□□□ -0.21
GRB2-208	ENST00000578961	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.77	□□□□□ -0.21
GRB2-208	ENST00000578961	ITGB4	P16144	1822 aa		13.77	□□□□□ -0.21
GRB2-208	ENST00000578961	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
GRB2-208	ENST00000578961	WDR43	Q15061	677 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
GRB2-208	ENST00000578961	RGPD4	Q7Z3J3	1758 aa		13.77	□□□□□ -0.21
GRB2-208	ENST00000578961	AEBP1	Q8IUX7	1158 aa		13.77	□□□□□ -0.21
GRB2-208	ENST00000578961	USHBP1	Q8N6Y0	703 aa		13.77	□□□□□ -0.21
GRB2-208	ENST00000578961	DOT1L	Q8TEK3	1739 aa		13.77	□□□□□ -0.21
GRB2-208	ENST00000578961	SPG7	Q9UQ90	795 aa		13.77	□□□□□ -0.21
GRB2-208	ENST00000578961	TOGARAM1	Q9Y4F4	1720 aa		13.77	□□□□□ -0.21
GRB2-208	ENST00000578961	EXOC5	O00471	708 aa		13.76	□□□□□ -0.21
GRB2-208	ENST00000578961	ZCRB1	Q8TBF4	217 aa	Known RBP	13.76	□□□□□ -0.21
GRB2-208	ENST00000578961	CCDC184	Q52MB2	194 aa		13.75	□□□□□ -0.21
GRB2-208	ENST00000578961	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.75	□□□□□ -0.21
GRB2-208	ENST00000578961	PLEKHF1	Q96S99	279 aa		13.75	□□□□□ -0.21
GRB2-208	ENST00000578961	MRC1	P22897	1456 aa		13.74	□□□□□ -0.21
GRB2-208	ENST00000578961	TNS1	Q9HBL0	1735 aa	Known RBP	13.74	□□□□□ -0.21
GRB2-208	ENST00000578961	HMOX1	P09601	288 aa		13.74	□□□□□ -0.21
GRB2-208	ENST00000578961	NKX1-1	Q15270	411 aa	Predicted RBP	13.74	□□□□□ -0.21
GRB2-208	ENST00000578961	NCBP3	Q53F19	620 aa	Known RBP	13.74	□□□□□ -0.21
GRB2-208	ENST00000578961	KRT27	Q7Z3Y8	459 aa		13.74	□□□□□ -0.21
GRB2-208	ENST00000578961	GAS2L2	Q8NHY3	880 aa		13.74	□□□□□ -0.21
GRB2-208	ENST00000578961	PRKAR2B	P31323	418 aa		13.73	□□□□□ -0.21
GRB2-208	ENST00000578961	PDE3B	Q13370	1112 aa		13.73	□□□□□ -0.21
GRB2-208	ENST00000578961	MIER1	Q8N108	512 aa		13.73	□□□□□ -0.21
GRB2-208	ENST00000578961	NEFM	P07197	916 aa		13.72	□□□□□ -0.21
GRB2-208	ENST00000578961	HSP90AB1	P08238	724 aa	Known RBP	13.72	□□□□□ -0.21
GRB2-208	ENST00000578961	IFNL2	Q8IZJ0	200 aa		13.72	□□□□□ -0.21
GRB2-208	ENST00000578961	ADAMTS8	Q9UP79	889 aa		13.72	□□□□□ -0.21
GRB2-208	ENST00000578961	HTATSF1	O43719	755 aa	Known RBP	13.71	□□□□□ -0.21
GRB2-208	ENST00000578961	PHKG2	P15735	406 aa		13.71	□□□□□ -0.21
GRB2-208	ENST00000578961	MARCH10	Q8NA82	808 aa	Predicted RBP	13.71	□□□□□ -0.21
GRB2-208	ENST00000578961	RUNDC1	Q96C34	613 aa		13.71	□□□□□ -0.21
GRB2-208	ENST00000578961	ZNF831	Q5JPB2	1677 aa		13.71	□□□□□ -0.21
GRB2-208	ENST00000578961	PAPPA	Q13219	1627 aa		13.71	□□□□□ -0.22
GRB2-208	ENST00000578961	BTAF1	O14981	1849 aa		13.71	□□□□□ -0.22
GRB2-208	ENST00000578961	MAP3K5	Q99683	1374 aa		13.71	□□□□□ -0.22
GRB2-208	ENST00000578961	MAPK8IP3	Q9UPT6	1336 aa		13.7	□□□□□ -0.22
GRB2-208	ENST00000578961	KAT6B	Q8WYB5	2073 aa		13.7	□□□□□ -0.22
GRB2-208	ENST00000578961		A0A0G2JS52	829 aa		13.7	□□□□□ -0.22
GRB2-208	ENST00000578961	CYP27B1	O15528	508 aa		13.7	□□□□□ -0.22
GRB2-208	ENST00000578961	MYT1	Q01538	1121 aa		13.7	□□□□□ -0.22
GRB2-208	ENST00000578961	AKAP4	Q5JQC9	854 aa		13.7	□□□□□ -0.22
GRB2-208	ENST00000578961	FAM196A	Q6ZSG2	479 aa		13.7	□□□□□ -0.22
GRB2-208	ENST00000578961	NGEF	Q8N5V2	710 aa		13.7	□□□□□ -0.22
GRB2-208	ENST00000578961	CIC	Q96RK0	1608 aa	Predicted RBP	13.7	□□□□□ -0.22
GRB2-208	ENST00000578961	MTHFSD	Q2M296	383 aa	Known RBP	13.69	□□□□□ -0.22
GRB2-208	ENST00000578961	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.69	□□□□□ -0.22
GRB2-208	ENST00000578961	PHACTR3	Q96KR7	559 aa		13.69	□□□□□ -0.22
GRB2-208	ENST00000578961	KDM6A	O15550	1401 aa	Predicted RBP	13.69	□□□□□ -0.22
GRB2-208	ENST00000578961	LY75	O60449	1722 aa		13.69	□□□□□ -0.22
GRB2-208	ENST00000578961	CEMIP	Q8WUJ3	1361 aa		13.69	□□□□□ -0.22
GRB2-208	ENST00000578961	UBR2	Q8IWV8	1755 aa		13.68	□□□□□ -0.22
GRB2-208	ENST00000578961	NFE2L2	Q16236	605 aa		13.68	□□□□□ -0.22
GRB2-208	ENST00000578961	C1orf141	Q5JVX7	400 aa		13.68	□□□□□ -0.22
GRB2-208	ENST00000578961	DCAF5	Q96JK2	942 aa		13.68	□□□□□ -0.22
GRB2-208	ENST00000578961	KDM3B	Q7LBC6	1761 aa		13.67	□□□□□ -0.22
GRB2-208	ENST00000578961	GNAT3	A8MTJ3	354 aa		13.66	□□□□□ -0.22
GRB2-208	ENST00000578961	ERVV-2	B6SEH9	535 aa		13.66	□□□□□ -0.22
GRB2-208	ENST00000578961	LMOD3	Q0VAK6	560 aa		13.66	□□□□□ -0.22
GRB2-208	ENST00000578961	TMPO	P42166	694 aa	Known RBP	13.65	□□□□□ -0.22
GRB2-208	ENST00000578961	CCDC27	Q2M243	656 aa		13.65	□□□□□ -0.22
GRB2-208	ENST00000578961	CCDC125	Q86Z20	511 aa		13.65	□□□□□ -0.22
GRB2-208	ENST00000578961	DDX54	Q8TDD1	881 aa	Known RBP	13.65	□□□□□ -0.22
GRB2-208	ENST00000578961	RREB1	Q92766	1687 aa		13.64	□□□□□ -0.23
GRB2-208	ENST00000578961	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.63	□□□□□ -0.23
GRB2-208	ENST00000578961	RNMT	O43148	476 aa	Known RBP	13.62	□□□□□ -0.23
GRB2-208	ENST00000578961	TAF1L	Q8IZX4	1826 aa		13.62	□□□□□ -0.23
GRB2-208	ENST00000578961	CCDC146	Q8IYE0	955 aa		13.61	□□□□□ -0.23
GRB2-208	ENST00000578961	FAM9B	Q8IZU0	186 aa		13.61	□□□□□ -0.23
GRB2-208	ENST00000578961	RTF1	Q92541	710 aa	Known RBP	13.61	□□□□□ -0.23
GRB2-208	ENST00000578961	BABAM1	Q9NWV8	329 aa		13.61	□□□□□ -0.23
GRB2-208	ENST00000578961	APAF1	O14727	1248 aa		13.6	□□□□□ -0.23
GRB2-208	ENST00000578961	RIPK4	P57078	832 aa		13.6	□□□□□ -0.23
GRB2-208	ENST00000578961	ILDR2	Q71H61	639 aa		13.6	□□□□□ -0.23
GRB2-208	ENST00000578961	IL17RE	Q8NFR9	667 aa		13.6	□□□□□ -0.23
GRB2-208	ENST00000578961	SLC52A2	Q9HAB3	445 aa		13.6	□□□□□ -0.23
GRB2-208	ENST00000578961	COL5A3	P25940	1745 aa	Predicted RBP	13.59	□□□□□ -0.23
GRB2-208	ENST00000578961	LAMB4	A4D0S4	1761 aa		13.59	□□□□□ -0.23
GRB2-208	ENST00000578961	CALD1	Q05682	793 aa	Known RBP	13.59	□□□□□ -0.23
GRB2-208	ENST00000578961	MPRIP	Q6WCQ1	1025 aa		13.59	□□□□□ -0.23
GRB2-208	ENST00000578961	TRIM35	Q9UPQ4	493 aa		13.59	□□□□□ -0.23
GRB2-208	ENST00000578961	PLSCR1	O15162	318 aa		13.58	□□□□□ -0.24
GRB2-208	ENST00000578961	HMGB2	P26583	209 aa	Known RBP	13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms