RNA–Protein interactions for RNA: ENST00000578910.1

CCDC57-212, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-212ENST00000578910 PRIM1P49642 420 aaKnown RBP20.05■□□□□ 0.8
CCDC57-212ENST00000578910 SMG6Q86US8 1419 aaKnown RBP20.04■□□□□ 0.8
CCDC57-212ENST00000578910 MEGF6O75095 1541 aa20.03■□□□□ 0.8
CCDC57-212ENST00000578910 LRP5O75197 1615 aa20.03■□□□□ 0.8
CCDC57-212ENST00000578910 SYTL4Q96C24 671 aaPredicted RBP20.03■□□□□ 0.8
CCDC57-212ENST00000578910 PDGFDQ9GZP0 370 aaPredicted RBP20.03■□□□□ 0.8
CCDC57-212ENST00000578910 RGPD3A6NKT7 1758 aaPredicted RBP20.03■□□□□ 0.8
CCDC57-212ENST00000578910 RGPD4Q7Z3J3 1758 aa20.03■□□□□ 0.8
CCDC57-212ENST00000578910 SLC15A2Q16348 729 aa20.02■□□□□ 0.8
CCDC57-212ENST00000578910 MAP2P11137 1827 aaKnown RBP20.02■□□□□ 0.79
CCDC57-212ENST00000578910 NHSQ6T4R5 1651 aa20.01■□□□□ 0.79
CCDC57-212ENST00000578910 EYA1Q99502 592 aa20.01■□□□□ 0.79
CCDC57-212ENST00000578910 LRRC4BQ9NT99 713 aa20.01■□□□□ 0.79
CCDC57-212ENST00000578910 STK32BQ9NY57 414 aa20.01■□□□□ 0.79
CCDC57-212ENST00000578910 SPON1Q9HCB6 807 aa20■□□□□ 0.79
CCDC57-212ENST00000578910 KNSTRNQ9Y448 316 aa19.98■□□□□ 0.79
CCDC57-212ENST00000578910 EIF4A2Q14240 407 aaKnown RBP19.97■□□□□ 0.79
CCDC57-212ENST00000578910 MORC1Q86VD1 984 aa19.97■□□□□ 0.79
CCDC57-212ENST00000578910 KIF7Q2M1P5 1343 aa19.97■□□□□ 0.79
CCDC57-212ENST00000578910 BTAF1O14981 1849 aa19.97■□□□□ 0.79
CCDC57-212ENST00000578910 CYP27B1O15528 508 aa19.96■□□□□ 0.79
CCDC57-212ENST00000578910 KCNQ4P56696 695 aa19.96■□□□□ 0.79
CCDC57-212ENST00000578910 ATF5Q9Y2D1 282 aaPredicted RBP19.95■□□□□ 0.78
CCDC57-212ENST00000578910 SHANK3Q9BYB0 1731 aa19.95■□□□□ 0.78
CCDC57-212ENST00000578910 ZBTB7AO95365 584 aa19.94■□□□□ 0.78
CCDC57-212ENST00000578910 SLC27A3Q5K4L6 730 aa19.94■□□□□ 0.78
CCDC57-212ENST00000578910 PCDH11XQ9BZA7 1347 aa19.94■□□□□ 0.78
CCDC57-212ENST00000578910 PCDH11YQ9BZA8 1340 aa19.94■□□□□ 0.78
CCDC57-212ENST00000578910 ZNF827Q17R98 1081 aa19.93■□□□□ 0.78
CCDC57-212ENST00000578910 SPG7Q9UQ90 795 aa19.93■□□□□ 0.78
CCDC57-212ENST00000578910 NSD2O96028 1365 aa19.93■□□□□ 0.78
CCDC57-212ENST00000578910 PPP1R1BQ9UD71 204 aaPredicted RBP19.92■□□□□ 0.78
CCDC57-212ENST00000578910 PER1O15534 1290 aaPredicted RBP19.91■□□□□ 0.78
CCDC57-212ENST00000578910 AMER1Q5JTC6 1135 aaPredicted RBP19.91■□□□□ 0.78
CCDC57-212ENST00000578910 AKT1S1Q96B36 256 aa19.91■□□□□ 0.78
CCDC57-212ENST00000578910 NCAPD2Q15021 1401 aa19.91■□□□□ 0.78
CCDC57-212ENST00000578910 ANKRD26Q9UPS8 1709 aa19.9■□□□□ 0.78
CCDC57-212ENST00000578910 NKX1-1Q15270 411 aaPredicted RBP19.9■□□□□ 0.78
CCDC57-212ENST00000578910 MPRIPQ6WCQ1 1025 aa19.9■□□□□ 0.78
CCDC57-212ENST00000578910 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.9■□□□□ 0.784e-7■□□□□ 8.8
CCDC57-212ENST00000578910 PTGER2P43116 358 aa19.89■□□□□ 0.77
CCDC57-212ENST00000578910 DOT1LQ8TEK3 1739 aa19.88■□□□□ 0.77
CCDC57-212ENST00000578910 CCNL1Q9UK58 526 aaPredicted RBP19.88■□□□□ 0.77
CCDC57-212ENST00000578910 CASZ1Q86V15 1759 aa19.88■□□□□ 0.77
CCDC57-212ENST00000578910 MTFR1LQ9H019 292 aa19.87■□□□□ 0.77
CCDC57-212ENST00000578910 IGSF1Q8N6C5 1336 aa19.86■□□□□ 0.77
CCDC57-212ENST00000578910 IFNL2Q8IZJ0 200 aa19.86■□□□□ 0.77
CCDC57-212ENST00000578910 PIGBQ92521 554 aa19.86■□□□□ 0.77
CCDC57-212ENST00000578910 PHKG2P15735 406 aa19.85■□□□□ 0.77
CCDC57-212ENST00000578910 TFCP2L1Q9NZI6 479 aa19.85■□□□□ 0.77
CCDC57-212ENST00000578910 PAPPAQ13219 1627 aa19.84■□□□□ 0.77
CCDC57-212ENST00000578910 CC2D1BQ5T0F9 858 aaKnown RBP19.84■□□□□ 0.77
CCDC57-212ENST00000578910 MTHFSP49914 203 aa19.83■□□□□ 0.77
CCDC57-212ENST00000578910 SGIP1Q9BQI5 828 aa19.83■□□□□ 0.77
CCDC57-212ENST00000578910 PNPLA7Q6ZV29 1317 aa19.82■□□□□ 0.76
CCDC57-212ENST00000578910 IL13P35225 146 aa19.82■□□□□ 0.76
CCDC57-212ENST00000578910 PLEKHO1Q53GL0 409 aaPredicted RBP19.82■□□□□ 0.76
CCDC57-212ENST00000578910 AEBP1Q8IUX7 1158 aa19.82■□□□□ 0.76
CCDC57-212ENST00000578910 LY75O60449 1722 aa19.82■□□□□ 0.76
CCDC57-212ENST00000578910 PKD1L3Q7Z443 1732 aa19.82■□□□□ 0.76
CCDC57-212ENST00000578910 CNGB1Q14028 1251 aaPredicted RBP19.81■□□□□ 0.76
CCDC57-212ENST00000578910 SLC16A10Q8TF71 515 aa19.81■□□□□ 0.76
CCDC57-212ENST00000578910 SMARCC1Q92922 1105 aaPredicted RBP19.81■□□□□ 0.76
CCDC57-212ENST00000578910 PALLDQ8WX93 1383 aa19.81■□□□□ 0.76
CCDC57-212ENST00000578910 SULT6B1Q6IMI4 303 aa19.8■□□□□ 0.76
CCDC57-212ENST00000578910 TMOD3Q9NYL9 352 aa19.79■□□□□ 0.76
CCDC57-212ENST00000578910 AMOTQ4VCS5 1084 aa19.78■□□□□ 0.76
CCDC57-212ENST00000578910 COL23A1Q86Y22 540 aaPredicted RBP19.78■□□□□ 0.76
CCDC57-212ENST00000578910 ARXQ96QS3 562 aa19.78■□□□□ 0.76
CCDC57-212ENST00000578910 FHDC1Q9C0D6 1143 aaPredicted RBP19.78■□□□□ 0.76
CCDC57-212ENST00000578910 ASAP1Q9ULH1 1129 aa19.78■□□□□ 0.76
CCDC57-212ENST00000578910 ITGB4P16144 1822 aa19.78■□□□□ 0.76
CCDC57-212ENST00000578910 TOGARAM1Q9Y4F4 1720 aa19.77■□□□□ 0.76
CCDC57-212ENST00000578910 SYT17Q9BSW7 474 aa19.77■□□□□ 0.76
CCDC57-212ENST00000578910 MSH5O43196 834 aa19.76■□□□□ 0.75
CCDC57-212ENST00000578910 ZNF530Q6P9A1 599 aaPredicted RBP19.76■□□□□ 0.75
CCDC57-212ENST00000578910 ATG3Q9NT62 314 aa19.76■□□□□ 0.75
CCDC57-212ENST00000578910 PLEKHG2Q9H7P9 1386 aa19.75■□□□□ 0.75
CCDC57-212ENST00000578910 ERVV-2B6SEH9 535 aa19.75■□□□□ 0.75
CCDC57-212ENST00000578910 HSP90AB1P08238 724 aaKnown RBP19.75■□□□□ 0.75
CCDC57-212ENST00000578910 HMGB2P26583 209 aaKnown RBP19.75■□□□□ 0.75
CCDC57-212ENST00000578910 LOC102724428A0A0B4J2F2 783 aa19.74■□□□□ 0.75
CCDC57-212ENST00000578910 SIK1P57059 783 aa19.74■□□□□ 0.75
CCDC57-212ENST00000578910 DCAF5Q96JK2 942 aa19.74■□□□□ 0.75
CCDC57-212ENST00000578910 DCAF8L1A6NGE4 600 aa19.73■□□□□ 0.75
CCDC57-212ENST00000578910 NPC1L1Q9UHC9 1359 aa19.72■□□□□ 0.75
CCDC57-212ENST00000578910 DIAPH1O60610 1272 aaKnown RBP19.72■□□□□ 0.75
CCDC57-212ENST00000578910 HMOX1P09601 288 aa19.72■□□□□ 0.75
CCDC57-212ENST00000578910 ATP6V1AP38606 617 aa19.72■□□□□ 0.75
CCDC57-212ENST00000578910 SMIM5Q71RC9 77 aa19.72■□□□□ 0.75
CCDC57-212ENST00000578910 POLD1P28340 1107 aa19.71■□□□□ 0.75
CCDC57-212ENST00000578910 CABP4P57796 275 aa19.71■□□□□ 0.75
CCDC57-212ENST00000578910 ITPK1Q13572 414 aa19.71■□□□□ 0.75
CCDC57-212ENST00000578910 C1orf141Q5JVX7 400 aa19.71■□□□□ 0.75
CCDC57-212ENST00000578910 QSER1Q2KHR3 1735 aa19.71■□□□□ 0.75
CCDC57-212ENST00000578910 KDRP35968 1356 aa19.7■□□□□ 0.74
CCDC57-212ENST00000578910 TUBGCP6Q96RT7 1819 aa19.7■□□□□ 0.74
CCDC57-212ENST00000578910 AMIGO3Q86WK7 504 aa19.7■□□□□ 0.74
CCDC57-212ENST00000578910 LINC00116Q8NCU8 138 aa19.7■□□□□ 0.74
CCDC57-212ENST00000578910 FLAD1Q8NFF5 587 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms