RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, humanhuman

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-208ENST00000578706 CSB-PGBD3P0DP91 1061 aa9.18□□□□□ -0.94
UBB-208ENST00000578706 ZEB1P37275 1124 aaPredicted RBP9.18□□□□□ -0.94
UBB-208ENST00000578706 BRCA1P38398 1863 aaKnown RBP9.18□□□□□ -0.94
UBB-208ENST00000578706 FSTL1Q12841 308 aa9.18□□□□□ -0.94
UBB-208ENST00000578706 N4BP2Q86UW6 1770 aaPredicted RBP9.18□□□□□ -0.94
UBB-208ENST00000578706 KIAA1210Q9ULL0 1709 aa9.17□□□□□ -0.94
UBB-208ENST00000578706 MSH5O43196 834 aa9.17□□□□□ -0.94
UBB-208ENST00000578706 FAM161AQ3B820 660 aa9.17□□□□□ -0.94
UBB-208ENST00000578706 AMIGO3Q86WK7 504 aa9.17□□□□□ -0.94
UBB-208ENST00000578706 MPHOSPH9Q99550 1183 aa9.17□□□□□ -0.94
UBB-208ENST00000578706 UBR3Q6ZT12 1888 aa9.17□□□□□ -0.94
UBB-208ENST00000578706 TNRC6CQ9HCJ0 1690 aaKnown RBP9.16□□□□□ -0.94
UBB-208ENST00000578706 KCPQ6ZWJ8 1503 aa9.16□□□□□ -0.94
UBB-208ENST00000578706 PXDNLA1KZ92 1463 aa9.16□□□□□ -0.94
UBB-208ENST00000578706 C10orf71Q711Q0 1435 aa9.16□□□□□ -0.94
UBB-208ENST00000578706 ERBB3P21860 1342 aa9.16□□□□□ -0.94
UBB-208ENST00000578706 LTN1O94822 1766 aa9.15□□□□□ -0.94
UBB-208ENST00000578706 IL2RBP14784 551 aa9.15□□□□□ -0.94
UBB-208ENST00000578706 CCNL1Q9UK58 526 aaPredicted RBP9.15□□□□□ -0.94
UBB-208ENST00000578706 ANKRD36BQ8N2N9 1353 aa9.14□□□□□ -0.95
UBB-208ENST00000578706 SOX12O15370 315 aa9.14□□□□□ -0.95
UBB-208ENST00000578706 SMIM5Q71RC9 77 aa9.14□□□□□ -0.95
UBB-208ENST00000578706 TNRC18O15417 2968 aaPredicted RBP9.14□□□□□ -0.95
UBB-208ENST00000578706 C4BP0C0L5 1744 aa9.14□□□□□ -0.95
UBB-208ENST00000578706 ARFGEF1Q9Y6D6 1849 aa9.13□□□□□ -0.95
UBB-208ENST00000578706 PRIM1P49642 420 aaKnown RBP9.13□□□□□ -0.95
UBB-208ENST00000578706 CABP2Q9NPB3 220 aa9.12□□□□□ -0.95
UBB-208ENST00000578706 NLRP2Q9NX02 1062 aa9.12□□□□□ -0.95
UBB-208ENST00000578706 FAM208AQ9UK61 1670 aaKnown RBP9.12□□□□□ -0.95
UBB-208ENST00000578706 SBF1O95248 1867 aa9.12□□□□□ -0.95
UBB-208ENST00000578706 FOXN1O15353 648 aa9.11□□□□□ -0.95
UBB-208ENST00000578706 C16orf71Q8IYS4 520 aaPredicted RBP9.11□□□□□ -0.95
UBB-208ENST00000578706 KCNH5Q8NCM2 988 aa9.11□□□□□ -0.95
UBB-208ENST00000578706 DDX54Q8TDD1 881 aaKnown RBP9.11□□□□□ -0.95
UBB-208ENST00000578706 SYTL4Q96C24 671 aaPredicted RBP9.11□□□□□ -0.95
UBB-208ENST00000578706 CABP1Q9NZU7 370 aa9.11□□□□□ -0.95
UBB-208ENST00000578706 PLEKHG2Q9H7P9 1386 aa9.11□□□□□ -0.95
UBB-208ENST00000578706 ADRA2BP18089 450 aa9.1□□□□□ -0.95
UBB-208ENST00000578706 C9orf131Q5VYM1 1079 aa9.1□□□□□ -0.95
UBB-208ENST00000578706 SMC1BQ8NDV3 1235 aa9.1□□□□□ -0.95
UBB-208ENST00000578706 RRAGCQ9HB90 399 aa9.1□□□□□ -0.95
UBB-208ENST00000578706 KDM2AQ9Y2K7 1162 aa9.1□□□□□ -0.95
UBB-208ENST00000578706 RGPD2P0DJD1 1756 aa9.09□□□□□ -0.95
UBB-208ENST00000578706 TTC21BQ7Z4L5 1316 aa9.09□□□□□ -0.95
UBB-208ENST00000578706 SRPK2P78362 688 aaKnown RBP9.09□□□□□ -0.95
UBB-208ENST00000578706 ARHGAP27Q6ZUM4 889 aa9.09□□□□□ -0.95
UBB-208ENST00000578706 BCS1LQ9Y276 419 aa9.09□□□□□ -0.95
UBB-208ENST00000578706 MAP2P11137 1827 aaKnown RBP9.08□□□□□ -0.96
UBB-208ENST00000578706 PDE4DIPQ5VU43 2346 aa9.08□□□□□ -0.96
UBB-208ENST00000578706 DCAF11Q8TEB1 546 aa9.08□□□□□ -0.96
UBB-208ENST00000578706 PRDM10Q9NQV6 1147 aa9.08□□□□□ -0.96
UBB-208ENST00000578706 USP47Q96K76 1375 aa9.08□□□□□ -0.96
UBB-208ENST00000578706 MON2Q7Z3U7 1717 aa9.08□□□□□ -0.96
UBB-208ENST00000578706 MEGF6O75095 1541 aa9.07□□□□□ -0.96
UBB-208ENST00000578706 A0A0G2JLW4 131 aa9.07□□□□□ -0.96
UBB-208ENST00000578706 FLAD1Q8NFF5 587 aa9.07□□□□□ -0.96
UBB-208ENST00000578706 ANKRD24Q8TF21 1146 aa9.07□□□□□ -0.96
UBB-208ENST00000578706 ABHD8Q96I13 439 aa9.07□□□□□ -0.96
UBB-208ENST00000578706 KDM2BQ8NHM5 1336 aa9.06□□□□□ -0.96
UBB-208ENST00000578706 VIRMAQ69YN4 1812 aaKnown RBP9.06□□□□□ -0.96
UBB-208ENST00000578706 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.06□□□□□ -0.96
UBB-208ENST00000578706 STAC3Q96MF2 364 aa9.06□□□□□ -0.96
UBB-208ENST00000578706 ITGB4P16144 1822 aa9.05□□□□□ -0.96
UBB-208ENST00000578706 PALLDQ8WX93 1383 aa9.05□□□□□ -0.96
UBB-208ENST00000578706 PHF14O94880 888 aa9.05□□□□□ -0.96
UBB-208ENST00000578706 DPEP1P16444 411 aa9.05□□□□□ -0.96
UBB-208ENST00000578706 KCNA3P22001 575 aa9.05□□□□□ -0.96
UBB-208ENST00000578706 RGS19P49795 217 aa9.05□□□□□ -0.96
UBB-208ENST00000578706 MLLT1Q03111 559 aaPredicted RBP9.05□□□□□ -0.96
UBB-208ENST00000578706 C4AP0C0L4 1744 aa9.05□□□□□ -0.96
UBB-208ENST00000578706 TTC21AQ8NDW8 1320 aa9.05□□□□□ -0.96
UBB-208ENST00000578706 USP31Q70CQ4 1352 aa9.04□□□□□ -0.96
UBB-208ENST00000578706 MKRN1Q9UHC7 482 aaKnown RBP9.04□□□□□ -0.96
UBB-208ENST00000578706 TIAM2Q8IVF5 1701 aa9.04□□□□□ -0.96
UBB-208ENST00000578706 NSD3Q9BZ95 1437 aa9.04□□□□□ -0.96
UBB-208ENST00000578706 FCHSD2O94868 740 aa9.03□□□□□ -0.96
UBB-208ENST00000578706 MMP10P09238 476 aa9.03□□□□□ -0.96
UBB-208ENST00000578706 TGFB2P61812 414 aa9.03□□□□□ -0.96
UBB-208ENST00000578706 NBPF1Q3BBV0 1214 aa9.03□□□□□ -0.96
UBB-208ENST00000578706 RNF181Q9P0P0 153 aa9.03□□□□□ -0.96
UBB-208ENST00000578706 KDM6AO15550 1401 aaPredicted RBP9.03□□□□□ -0.96
UBB-208ENST00000578706 CENPJQ9HC77 1338 aaPredicted RBP9.03□□□□□ -0.96
UBB-208ENST00000578706 LBX1P52954 281 aa9.02□□□□□ -0.97
UBB-208ENST00000578706 DCAF5Q96JK2 942 aa9.02□□□□□ -0.97
UBB-208ENST00000578706 AK7Q96M32 723 aa9.02□□□□□ -0.97
UBB-208ENST00000578706 CNTNAP1P78357 1384 aa9.01□□□□□ -0.97
UBB-208ENST00000578706 POTECB2RU33 542 aa9.01□□□□□ -0.97
UBB-208ENST00000578706 SSFA2P28290 1259 aa9.01□□□□□ -0.97
UBB-208ENST00000578706 CTCFP49711 727 aaPredicted RBP9.01□□□□□ -0.97
UBB-208ENST00000578706 CCDC88AQ3V6T2 1871 aa9.01□□□□□ -0.97
UBB-208ENST00000578706 LINC00116Q8NCU8 138 aa9.01□□□□□ -0.97
UBB-208ENST00000578706 NME9Q86XW9 330 aa9□□□□□ -0.97
UBB-208ENST00000578706 ZCRB1Q8TBF4 217 aaKnown RBP9□□□□□ -0.97
UBB-208ENST00000578706 CREBZFQ9NS37 354 aa9□□□□□ -0.97
UBB-208ENST00000578706 CD163L1Q9NR16 1453 aa9□□□□□ -0.97
UBB-208ENST00000578706 KTN1Q86UP2 1357 aaKnown RBP8.99□□□□□ -0.97
UBB-208ENST00000578706 SBNO2Q9Y2G9 1366 aa8.99□□□□□ -0.97
UBB-208ENST00000578706 HSPA8P11142 646 aaKnown RBP8.99□□□□□ -0.97
UBB-208ENST00000578706 VEGFAP15692 232 aaPredicted RBP8.99□□□□□ -0.97
UBB-208ENST00000578706 KCNA4P22459 653 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms