RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 LBX1P52954 281 aa10.55□□□□□ -0.72
CDK5RAP3-209ENST00000578663 TOM1L2Q6ZVM7 507 aa10.55□□□□□ -0.72
CDK5RAP3-209ENST00000578663 CPSF1Q10570 1443 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-209ENST00000578663 USP6P35125 1406 aa10.54□□□□□ -0.72
CDK5RAP3-209ENST00000578663 PPIP5K1Q6PFW1 1433 aa10.54□□□□□ -0.72
CDK5RAP3-209ENST00000578663 ACSBG1Q96GR2 724 aa10.54□□□□□ -0.72
CDK5RAP3-209ENST00000578663 CARD10Q9BWT7 1032 aa10.54□□□□□ -0.72
CDK5RAP3-209ENST00000578663 TFCP2L1Q9NZI6 479 aa10.54□□□□□ -0.72
CDK5RAP3-209ENST00000578663 ARFGEF1Q9Y6D6 1849 aa10.54□□□□□ -0.72
CDK5RAP3-209ENST00000578663 CCDC7Q96M83 1385 aa10.53□□□□□ -0.72
CDK5RAP3-209ENST00000578663 COL23A1Q86Y22 540 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP3-209ENST00000578663 RRAGCQ9HB90 399 aa10.53□□□□□ -0.72
CDK5RAP3-209ENST00000578663 MKRN1Q9UHC7 482 aaKnown RBP10.52□□□□□ -0.73
CDK5RAP3-209ENST00000578663 KCNQ4P56696 695 aa10.51□□□□□ -0.73
CDK5RAP3-209ENST00000578663 NLRP6P59044 892 aa10.51□□□□□ -0.73
CDK5RAP3-209ENST00000578663 DCAF11Q8TEB1 546 aa10.51□□□□□ -0.73
CDK5RAP3-209ENST00000578663 TAF1LQ8IZX4 1826 aa10.5□□□□□ -0.73
CDK5RAP3-209ENST00000578663 EXOC5O00471 708 aa10.5□□□□□ -0.73
CDK5RAP3-209ENST00000578663 HSPA8P11142 646 aaKnown RBP10.5□□□□□ -0.73
CDK5RAP3-209ENST00000578663 ARHGEF25Q86VW2 580 aa10.5□□□□□ -0.73
CDK5RAP3-209ENST00000578663 PLEKHG2Q9H7P9 1386 aa10.5□□□□□ -0.73
CDK5RAP3-209ENST00000578663 CUL9Q8IWT3 2517 aa10.49□□□□□ -0.73
CDK5RAP3-209ENST00000578663 SLC27A3Q5K4L6 730 aa10.49□□□□□ -0.73
CDK5RAP3-209ENST00000578663 KDM2AQ9Y2K7 1162 aa10.49□□□□□ -0.73
CDK5RAP3-209ENST00000578663 AXIN2Q9Y2T1 843 aa10.49□□□□□ -0.73
CDK5RAP3-209ENST00000578663 NFAT5O94916 1531 aa10.48□□□□□ -0.73
CDK5RAP3-209ENST00000578663 C5P01031 1676 aa10.48□□□□□ -0.73
CDK5RAP3-209ENST00000578663 TOGARAM1Q9Y4F4 1720 aa10.48□□□□□ -0.73
CDK5RAP3-209ENST00000578663 ZBTB7CA1YPR0 619 aa10.48□□□□□ -0.73
CDK5RAP3-209ENST00000578663 PRPF38BQ5VTL8 546 aaKnown RBP10.48□□□□□ -0.73
CDK5RAP3-209ENST00000578663 KCNH5Q8NCM2 988 aa10.48□□□□□ -0.73
CDK5RAP3-209ENST00000578663 WBP1LQ9NX94 342 aa10.48□□□□□ -0.73
CDK5RAP3-209ENST00000578663 KDM2BQ8NHM5 1336 aa10.48□□□□□ -0.73
CDK5RAP3-209ENST00000578663 SRPK2P78362 688 aaKnown RBP10.47□□□□□ -0.73
CDK5RAP3-209ENST00000578663 C9orf131Q5VYM1 1079 aa10.47□□□□□ -0.73
CDK5RAP3-209ENST00000578663 AIDAQ96BJ3 306 aa10.47□□□□□ -0.73
CDK5RAP3-209ENST00000578663 CNTNAP1P78357 1384 aa10.47□□□□□ -0.73
CDK5RAP3-209ENST00000578663 MSH5O43196 834 aa10.46□□□□□ -0.73
CDK5RAP3-209ENST00000578663 CSB-PGBD3P0DP91 1061 aa10.46□□□□□ -0.73
CDK5RAP3-209ENST00000578663 CCDC88AQ3V6T2 1871 aa10.46□□□□□ -0.74
CDK5RAP3-209ENST00000578663 TTC21AQ8NDW8 1320 aa10.45□□□□□ -0.74
CDK5RAP3-209ENST00000578663 CENPJQ9HC77 1338 aaPredicted RBP10.45□□□□□ -0.74
CDK5RAP3-209ENST00000578663 CREBZFQ9NS37 354 aa10.45□□□□□ -0.74
CDK5RAP3-209ENST00000578663 CASP8AP2Q9UKL3 1982 aa10.45□□□□□ -0.74
CDK5RAP3-209ENST00000578663 UBR3Q6ZT12 1888 aa10.44□□□□□ -0.74
CDK5RAP3-209ENST00000578663 DOT1LQ8TEK3 1739 aa10.44□□□□□ -0.74
CDK5RAP3-209ENST00000578663 ERBB3P21860 1342 aa10.44□□□□□ -0.74
CDK5RAP3-209ENST00000578663 ARHGAP27Q6ZUM4 889 aa10.44□□□□□ -0.74
CDK5RAP3-209ENST00000578663 RAB3GAP2Q9H2M9 1393 aa10.43□□□□□ -0.74
CDK5RAP3-209ENST00000578663 CFAP44Q96MT7 982 aa10.43□□□□□ -0.74
CDK5RAP3-209ENST00000578663 CABP2Q9NPB3 220 aa10.43□□□□□ -0.74
CDK5RAP3-209ENST00000578663 CABP1Q9NZU7 370 aa10.43□□□□□ -0.74
CDK5RAP3-209ENST00000578663 TTC21BQ7Z4L5 1316 aa10.42□□□□□ -0.74
CDK5RAP3-209ENST00000578663 IL2RBP14784 551 aa10.42□□□□□ -0.74
CDK5RAP3-209ENST00000578663 ZNF692Q9BU19 519 aaPredicted RBP10.42□□□□□ -0.74
CDK5RAP3-209ENST00000578663 VEGFBP49765 207 aa10.41□□□□□ -0.74
CDK5RAP3-209ENST00000578663 BCS1LQ9Y276 419 aa10.41□□□□□ -0.74
CDK5RAP3-209ENST00000578663 TIAM2Q8IVF5 1701 aa10.41□□□□□ -0.74
CDK5RAP3-209ENST00000578663 DLL1O00548 723 aa10.4□□□□□ -0.74
CDK5RAP3-209ENST00000578663 FAM208AQ9UK61 1670 aaKnown RBP10.4□□□□□ -0.74
CDK5RAP3-209ENST00000578663 THSD7BQ9C0I4 1608 aa10.4□□□□□ -0.75
CDK5RAP3-209ENST00000578663 USP31Q70CQ4 1352 aa10.39□□□□□ -0.75
CDK5RAP3-209ENST00000578663 MON2Q7Z3U7 1717 aa10.39□□□□□ -0.75
CDK5RAP3-209ENST00000578663 SMIM5Q71RC9 77 aa10.39□□□□□ -0.75
CDK5RAP3-209ENST00000578663 ANKRD36BQ8N2N9 1353 aa10.39□□□□□ -0.75
CDK5RAP3-209ENST00000578663 EVC2Q86UK5 1308 aa10.38□□□□□ -0.75
CDK5RAP3-209ENST00000578663 HMGB2P26583 209 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-209ENST00000578663 NBPF1Q3BBV0 1214 aa10.38□□□□□ -0.75
CDK5RAP3-209ENST00000578663 NLRP2Q9NX02 1062 aa10.38□□□□□ -0.75
CDK5RAP3-209ENST00000578663 RNF181Q9P0P0 153 aa10.38□□□□□ -0.75
CDK5RAP3-209ENST00000578663 LTN1O94822 1766 aa10.38□□□□□ -0.75
CDK5RAP3-209ENST00000578663 LTBP1Q14766 1721 aa10.38□□□□□ -0.75
CDK5RAP3-209ENST00000578663 NSD2O96028 1365 aa10.38□□□□□ -0.75
CDK5RAP3-209ENST00000578663 ADAMTS7Q9UKP4 1686 aa10.38□□□□□ -0.75
CDK5RAP3-209ENST00000578663 A0A0C4DFX4 3053 aa10.37□□□□□ -0.75
CDK5RAP3-209ENST00000578663 SOX12O15370 315 aa10.37□□□□□ -0.75
CDK5RAP3-209ENST00000578663 MCOLN1Q9GZU1 580 aa10.37□□□□□ -0.75
CDK5RAP3-209ENST00000578663 C4BP0C0L5 1744 aa10.36□□□□□ -0.75
CDK5RAP3-209ENST00000578663 POTECB2RU33 542 aa10.36□□□□□ -0.75
CDK5RAP3-209ENST00000578663 VEGFAP15692 232 aaPredicted RBP10.36□□□□□ -0.75
CDK5RAP3-209ENST00000578663 AMIGO3Q86WK7 504 aa10.36□□□□□ -0.75
CDK5RAP3-209ENST00000578663 KTN1Q86UP2 1357 aaKnown RBP10.36□□□□□ -0.75
CDK5RAP3-209ENST00000578663 A0A0G2JLW4 131 aa10.35□□□□□ -0.75
CDK5RAP3-209ENST00000578663 CCNL1Q9UK58 526 aaPredicted RBP10.35□□□□□ -0.75
CDK5RAP3-209ENST00000578663 SZT2Q5T011 3432 aa10.35□□□□□ -0.75
CDK5RAP3-209ENST00000578663 FCHSD2O94868 740 aa10.34□□□□□ -0.75
CDK5RAP3-209ENST00000578663 HABP4Q5JVS0 413 aaKnown RBP10.34□□□□□ -0.75
CDK5RAP3-209ENST00000578663 FLAD1Q8NFF5 587 aa10.34□□□□□ -0.75
CDK5RAP3-209ENST00000578663 ANKRD24Q8TF21 1146 aa10.34□□□□□ -0.75
CDK5RAP3-209ENST00000578663 KDM6AO15550 1401 aaPredicted RBP10.33□□□□□ -0.76
CDK5RAP3-209ENST00000578663 USP47Q96K76 1375 aa10.32□□□□□ -0.76
CDK5RAP3-209ENST00000578663 GLTPD2A6NH11 291 aa10.32□□□□□ -0.76
CDK5RAP3-209ENST00000578663 PRIM1P49642 420 aaKnown RBP10.32□□□□□ -0.76
CDK5RAP3-209ENST00000578663 TGFB2P61812 414 aa10.32□□□□□ -0.76
CDK5RAP3-209ENST00000578663 DICER1Q9UPY3 1922 aaKnown RBP10.32□□□□□ -0.76
CDK5RAP3-209ENST00000578663 NSD3Q9BZ95 1437 aa10.32□□□□□ -0.76
CDK5RAP3-209ENST00000578663 PASKQ96RG2 1323 aa10.32□□□□□ -0.76
CDK5RAP3-209ENST00000578663 SBNO2Q9Y2G9 1366 aa10.31□□□□□ -0.76
CDK5RAP3-209ENST00000578663 DPEP1P16444 411 aa10.31□□□□□ -0.76
CDK5RAP3-209ENST00000578663 KCNA3P22001 575 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms