RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 RTL1A6NKG5 1358 aa29.52■■■□□ 2.32
TSEN54-205ENST00000578415 DOT1LQ8TEK3 1739 aa29.52■■■□□ 2.32
TSEN54-205ENST00000578415 SHANK3Q9BYB0 1731 aa29.52■■■□□ 2.32
TSEN54-205ENST00000578415 SLC24A1O60721 1099 aa29.52■■■□□ 2.32
TSEN54-205ENST00000578415 QSER1Q2KHR3 1735 aa29.51■■■□□ 2.32
TSEN54-205ENST00000578415 RRS1Q15050 365 aaKnown RBP29.51■■■□□ 2.31
TSEN54-205ENST00000578415 RGPD2P0DJD1 1756 aa29.5■■■□□ 2.31
TSEN54-205ENST00000578415 TFCP2L1Q9NZI6 479 aa29.5■■■□□ 2.31
TSEN54-205ENST00000578415 FYB1O15117 783 aa29.49■■■□□ 2.31
TSEN54-205ENST00000578415 NBPF6Q5VWK0 638 aa29.49■■■□□ 2.31
TSEN54-205ENST00000578415 NBPF4Q96M43 638 aa29.49■■■□□ 2.31
TSEN54-205ENST00000578415 GGNBP2Q9H3C7 697 aa29.48■■■□□ 2.31
TSEN54-205ENST00000578415 POLD1P28340 1107 aa29.47■■■□□ 2.31
TSEN54-205ENST00000578415 LY75O60449 1722 aa29.47■■■□□ 2.31
TSEN54-205ENST00000578415 COL24A1Q17RW2 1714 aa29.47■■■□□ 2.31
TSEN54-205ENST00000578415 TUBGCP6Q96RT7 1819 aa29.46■■■□□ 2.31
TSEN54-205ENST00000578415 USHBP1Q8N6Y0 703 aa29.46■■■□□ 2.31
TSEN54-205ENST00000578415 KLHL34Q8N239 644 aa29.45■■■□□ 2.31
TSEN54-205ENST00000578415 CCNL1Q9UK58 526 aaPredicted RBP29.45■■■□□ 2.31
TSEN54-205ENST00000578415 GPR162Q16538 588 aa29.44■■■□□ 2.3
TSEN54-205ENST00000578415 CGNL1Q0VF96 1302 aa29.44■■■□□ 2.3
TSEN54-205ENST00000578415 CHD4Q14839 1912 aa29.43■■■□□ 2.3
TSEN54-205ENST00000578415 USP47Q96K76 1375 aa29.42■■■□□ 2.3
TSEN54-205ENST00000578415 TMF1P82094 1093 aa29.42■■■□□ 2.3
TSEN54-205ENST00000578415 SMG6Q86US8 1419 aaKnown RBP29.4■■■□□ 2.3
TSEN54-205ENST00000578415 NLGN2Q8NFZ4 835 aa29.4■■■□□ 2.3
TSEN54-205ENST00000578415 RAPGEF4Q8WZA2 1011 aa29.4■■■□□ 2.3
TSEN54-205ENST00000578415 INSRP06213 1382 aa29.39■■■□□ 2.3
TSEN54-205ENST00000578415 HSP90AB2PQ58FF8 381 aa29.39■■■□□ 2.3
TSEN54-205ENST00000578415 COL23A1Q86Y22 540 aaPredicted RBP29.38■■■□□ 2.29
TSEN54-205ENST00000578415 TATP17735 454 aaPredicted RBP29.37■■■□□ 2.29
TSEN54-205ENST00000578415 FLT4P35916 1363 aa29.36■■■□□ 2.29
TSEN54-205ENST00000578415 PELP1Q8IZL8 1130 aaKnown RBP29.34■■■□□ 2.29
TSEN54-205ENST00000578415 PCDH11XQ9BZA7 1347 aa29.34■■■□□ 2.29
TSEN54-205ENST00000578415 PCDH11YQ9BZA8 1340 aa29.34■■■□□ 2.29
TSEN54-205ENST00000578415 KIF24Q5T7B8 1368 aa29.34■■■□□ 2.29
TSEN54-205ENST00000578415 MSH5O43196 834 aa29.33■■■□□ 2.29
TSEN54-205ENST00000578415 C1QTNF8P60827 252 aa29.32■■■□□ 2.28
TSEN54-205ENST00000578415 GOLGB1Q14789 3259 aaKnown RBP29.32■■■□□ 2.28
TSEN54-205ENST00000578415 CYP27B1O15528 508 aa29.31■■■□□ 2.28
TSEN54-205ENST00000578415 CARD14Q9BXL6 1004 aa29.31■■■□□ 2.28
TSEN54-205ENST00000578415 PALLDQ8WX93 1383 aa29.3■■■□□ 2.28
TSEN54-205ENST00000578415 KIF20BQ96Q89 1820 aa29.3■■■□□ 2.28
TSEN54-205ENST00000578415 MSL1Q68DK7 614 aa29.3■■■□□ 2.28
TSEN54-205ENST00000578415 CDCA8Q53HL2 280 aa29.29■■■□□ 2.28
TSEN54-205ENST00000578415 EMILIN1Q9Y6C2 1016 aa29.29■■■□□ 2.28
TSEN54-205ENST00000578415 YBX3P16989 372 aaKnown RBP eCLIP29.28■■■□□ 2.28
TSEN54-205ENST00000578415 MPRIPQ6WCQ1 1025 aa29.28■■■□□ 2.28
TSEN54-205ENST00000578415 C5P01031 1676 aa29.28■■■□□ 2.28
TSEN54-205ENST00000578415 NSD3Q9BZ95 1437 aa29.26■■■□□ 2.27
TSEN54-205ENST00000578415 SENP3-EIF4A1A0A087X0R7 540 aa29.25■■■□□ 2.27
TSEN54-205ENST00000578415 NCAPD2Q15021 1401 aa29.25■■■□□ 2.27
TSEN54-205ENST00000578415 TOGARAM1Q9Y4F4 1720 aa29.25■■■□□ 2.27
TSEN54-205ENST00000578415 FLAD1Q8NFF5 587 aa29.22■■■□□ 2.27
TSEN54-205ENST00000578415 PKD1L3Q7Z443 1732 aa29.21■■■□□ 2.27
TSEN54-205ENST00000578415 GRIN3BO60391 1043 aa29.21■■■□□ 2.27
TSEN54-205ENST00000578415 AMIGO3Q86WK7 504 aa29.21■■■□□ 2.27
TSEN54-205ENST00000578415 PIGBQ92521 554 aa29.2■■■□□ 2.26
TSEN54-205ENST00000578415 SMARCC1Q92922 1105 aaPredicted RBP29.2■■■□□ 2.26
TSEN54-205ENST00000578415 TAF1LQ8IZX4 1826 aa29.2■■■□□ 2.26
TSEN54-205ENST00000578415 GIGYF1O75420 1035 aaPredicted RBP29.19■■■□□ 2.26
TSEN54-205ENST00000578415 HMGB2P26583 209 aaKnown RBP29.19■■■□□ 2.26
TSEN54-205ENST00000578415 NKX1-1Q15270 411 aaPredicted RBP29.19■■■□□ 2.26
TSEN54-205ENST00000578415 C4BP0C0L5 1744 aa29.18■■■□□ 2.26
TSEN54-205ENST00000578415 PPM1GO15355 546 aaPredicted RBP29.18■■■□□ 2.26
TSEN54-205ENST00000578415 CD2APQ9Y5K6 639 aa29.18■■■□□ 2.26
TSEN54-205ENST00000578415 ITGB4P16144 1822 aa29.16■■■□□ 2.26
TSEN54-205ENST00000578415 AK7Q96M32 723 aa29.16■■■□□ 2.26
TSEN54-205ENST00000578415 ANKRD26Q9UPS8 1709 aa29.16■■■□□ 2.26
TSEN54-205ENST00000578415 WASHC2AQ641Q2 1341 aa29.16■■■□□ 2.26
TSEN54-205ENST00000578415 SMIM5Q71RC9 77 aa29.15■■■□□ 2.26
TSEN54-205ENST00000578415 EYA1Q99502 592 aa29.15■■■□□ 2.26
TSEN54-205ENST00000578415 SPG7Q9UQ90 795 aa29.14■■■□□ 2.26
TSEN54-205ENST00000578415 PHF14O94880 888 aa29.12■■■□□ 2.25
TSEN54-205ENST00000578415 TRIM26Q12899 539 aaPredicted RBP29.12■■■□□ 2.25
TSEN54-205ENST00000578415 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.11■■■□□ 2.25
TSEN54-205ENST00000578415 LOC102724428A0A0B4J2F2 783 aa29.11■■■□□ 2.25
TSEN54-205ENST00000578415 SIK1P57059 783 aa29.11■■■□□ 2.25
TSEN54-205ENST00000578415 LINC00116Q8NCU8 138 aa29.11■■■□□ 2.25
TSEN54-205ENST00000578415 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.11■■■□□ 2.25
TSEN54-205ENST00000578415 POLKQ9UBT6 870 aa29.11■■■□□ 2.25
TSEN54-205ENST00000578415 MAP2P11137 1827 aaKnown RBP29.1■■■□□ 2.25
TSEN54-205ENST00000578415 UBR3Q6ZT12 1888 aa29.09■■■□□ 2.25
TSEN54-205ENST00000578415 SSFA2P28290 1259 aa29.08■■■□□ 2.25
TSEN54-205ENST00000578415 TMOD3Q9NYL9 352 aa29.08■■■□□ 2.25
TSEN54-205ENST00000578415 ASAP1Q9ULH1 1129 aa29.08■■■□□ 2.25
TSEN54-205ENST00000578415 ATP10DQ9P241 1426 aa29.08■■■□□ 2.25
TSEN54-205ENST00000578415 PHKG2P15735 406 aa29.07■■■□□ 2.24
TSEN54-205ENST00000578415 ITPK1Q13572 414 aa29.07■■■□□ 2.24
TSEN54-205ENST00000578415 IFNL2Q8IZJ0 200 aa29.05■■■□□ 2.24
TSEN54-205ENST00000578415 EIF4A2Q14240 407 aaKnown RBP29.04■■■□□ 2.24
TSEN54-205ENST00000578415 ADCY9O60503 1353 aa29.03■■■□□ 2.24
TSEN54-205ENST00000578415 IGSF1Q8N6C5 1336 aa29.03■■■□□ 2.24
TSEN54-205ENST00000578415 TIMELESSQ9UNS1 1208 aa29.03■■■□□ 2.24
TSEN54-205ENST00000578415 GNPATO15228 680 aa29.02■■■□□ 2.24
TSEN54-205ENST00000578415 ATP6V1AP38606 617 aa29.01■■■□□ 2.23
TSEN54-205ENST00000578415 ATG3Q9NT62 314 aa29.01■■■□□ 2.23
TSEN54-205ENST00000578415 TNNT2P45379 298 aaPredicted RBP29■■■□□ 2.23
TSEN54-205ENST00000578415 WWC3Q9ULE0 1092 aa29■■■□□ 2.23
TSEN54-205ENST00000578415 PLEKHG2Q9H7P9 1386 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms