RNA–Protein interactions for RNA: ENST00000578357.5

CUEDC1-208, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 661 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-208ENST00000578357 PAPPAQ13219 1627 aa14.1□□□□□ -0.15
CUEDC1-208ENST00000578357 BTAF1O14981 1849 aa14.1□□□□□ -0.15
CUEDC1-208ENST00000578357 NLGN2Q8NFZ4 835 aa14.09□□□□□ -0.15
CUEDC1-208ENST00000578357 MON2Q7Z3U7 1717 aa14.09□□□□□ -0.15
CUEDC1-208ENST00000578357 GOLGB1Q14789 3259 aaKnown RBP14.08□□□□□ -0.16
CUEDC1-208ENST00000578357 HOXC9P31274 260 aa14.08□□□□□ -0.16
CUEDC1-208ENST00000578357 MAP3K19Q56UN5 1328 aa14.08□□□□□ -0.16
CUEDC1-208ENST00000578357 A0A1W2PP64 1363 aa14.08□□□□□ -0.16
CUEDC1-208ENST00000578357 COL23A1Q86Y22 540 aaPredicted RBP14.07□□□□□ -0.16
CUEDC1-208ENST00000578357 CGNL1Q0VF96 1302 aa14.07□□□□□ -0.16
CUEDC1-208ENST00000578357 USP47Q96K76 1375 aa14.07□□□□□ -0.16
CUEDC1-208ENST00000578357 FLAD1Q8NFF5 587 aa14.06□□□□□ -0.16
CUEDC1-208ENST00000578357 USP54Q70EL1 1684 aa14.06□□□□□ -0.16
CUEDC1-208ENST00000578357 LTN1O94822 1766 aa14.06□□□□□ -0.16
CUEDC1-208ENST00000578357 YBX3P16989 372 aaKnown RBP eCLIP14.05□□□□□ -0.16
CUEDC1-208ENST00000578357 FBLN1P23142 703 aa14.05□□□□□ -0.16
CUEDC1-208ENST00000578357 RAPGEF4Q8WZA2 1011 aa14.05□□□□□ -0.16
CUEDC1-208ENST00000578357 NBPF6Q5VWK0 638 aa14.04□□□□□ -0.16
CUEDC1-208ENST00000578357 NBPF4Q96M43 638 aa14.04□□□□□ -0.16
CUEDC1-208ENST00000578357 CD2APQ9Y5K6 639 aa14.04□□□□□ -0.16
CUEDC1-208ENST00000578357 TATP17735 454 aaPredicted RBP14.03□□□□□ -0.16
CUEDC1-208ENST00000578357 NSD2O96028 1365 aa14.03□□□□□ -0.16
CUEDC1-208ENST00000578357 ST20-MTHFSA0A0A6YYL1 179 aa14.02□□□□□ -0.17
CUEDC1-208ENST00000578357 IFFO2Q5TF58 517 aa14.02□□□□□ -0.17
CUEDC1-208ENST00000578357 MSL1Q68DK7 614 aa14.02□□□□□ -0.17
CUEDC1-208ENST00000578357 RRS1Q15050 365 aaKnown RBP14.01□□□□□ -0.17
CUEDC1-208ENST00000578357 TESK2Q96S53 571 aa14.01□□□□□ -0.17
CUEDC1-208ENST00000578357 QSER1Q2KHR3 1735 aa14.01□□□□□ -0.17
CUEDC1-208ENST00000578357 TONSLQ96HA7 1378 aa14□□□□□ -0.17
CUEDC1-208ENST00000578357 FYB1O15117 783 aa14□□□□□ -0.17
CUEDC1-208ENST00000578357 MPRIPQ6WCQ1 1025 aa14□□□□□ -0.17
CUEDC1-208ENST00000578357 USHBP1Q8N6Y0 703 aa14□□□□□ -0.17
CUEDC1-208ENST00000578357 GPBP1L1Q9HC44 474 aaPredicted RBP14□□□□□ -0.17
CUEDC1-208ENST00000578357 CEP350Q5VT06 3117 aa13.99□□□□□ -0.17
CUEDC1-208ENST00000578357 RTL1A6NKG5 1358 aa13.99□□□□□ -0.17
CUEDC1-208ENST00000578357 COL24A1Q17RW2 1714 aa13.99□□□□□ -0.17
CUEDC1-208ENST00000578357 FAM208AQ9UK61 1670 aaKnown RBP13.99□□□□□ -0.17
CUEDC1-208ENST00000578357 SMARCC1Q92922 1105 aaPredicted RBP13.99□□□□□ -0.17
CUEDC1-208ENST00000578357 MEGF6O75095 1541 aa13.99□□□□□ -0.17
CUEDC1-208ENST00000578357 SMG6Q86US8 1419 aaKnown RBP13.98□□□□□ -0.17
CUEDC1-208ENST00000578357 PCDH11XQ9BZA7 1347 aa13.98□□□□□ -0.17
CUEDC1-208ENST00000578357 PCDH11YQ9BZA8 1340 aa13.98□□□□□ -0.17
CUEDC1-208ENST00000578357 PCGF6Q9BYE7 350 aa13.98□□□□□ -0.17
CUEDC1-208ENST00000578357 GGNBP2Q9H3C7 697 aa13.98□□□□□ -0.17
CUEDC1-208ENST00000578357 HSP90AB2PQ58FF8 381 aa13.97□□□□□ -0.17
CUEDC1-208ENST00000578357 AK7Q96M32 723 aa13.97□□□□□ -0.17
CUEDC1-208ENST00000578357 PALLDQ8WX93 1383 aa13.96□□□□□ -0.17
CUEDC1-208ENST00000578357 LY75O60449 1722 aa13.96□□□□□ -0.17
CUEDC1-208ENST00000578357 TMF1P82094 1093 aa13.96□□□□□ -0.17
CUEDC1-208ENST00000578357 ATP10DQ9P241 1426 aa13.96□□□□□ -0.18
CUEDC1-208ENST00000578357 INSRP06213 1382 aa13.96□□□□□ -0.18
CUEDC1-208ENST00000578357 CYP27B1O15528 508 aa13.95□□□□□ -0.18
CUEDC1-208ENST00000578357 DOT1LQ8TEK3 1739 aa13.95□□□□□ -0.18
CUEDC1-208ENST00000578357 SHANK3Q9BYB0 1731 aa13.94□□□□□ -0.18
CUEDC1-208ENST00000578357 KIF24Q5T7B8 1368 aa13.94□□□□□ -0.18
CUEDC1-208ENST00000578357 PHF14O94880 888 aa13.93□□□□□ -0.18
CUEDC1-208ENST00000578357 HSPA6P17066 643 aa13.93□□□□□ -0.18
CUEDC1-208ENST00000578357 CDCA8Q53HL2 280 aa13.93□□□□□ -0.18
CUEDC1-208ENST00000578357 ZNF526Q8TF50 670 aaPredicted RBP13.93□□□□□ -0.18
CUEDC1-208ENST00000578357 PIGBQ92521 554 aa13.93□□□□□ -0.18
CUEDC1-208ENST00000578357 SPG7Q9UQ90 795 aa13.93□□□□□ -0.18
CUEDC1-208ENST00000578357 TUBGCP6Q96RT7 1819 aa13.92□□□□□ -0.18
CUEDC1-208ENST00000578357 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.92□□□□□ -0.18
CUEDC1-208ENST00000578357 SSFA2P28290 1259 aa13.92□□□□□ -0.18
CUEDC1-208ENST00000578357 NKX1-1Q15270 411 aaPredicted RBP13.92□□□□□ -0.18
CUEDC1-208ENST00000578357 FLT4P35916 1363 aa13.92□□□□□ -0.18
CUEDC1-208ENST00000578357 IGSF1Q8N6C5 1336 aa13.91□□□□□ -0.18
CUEDC1-208ENST00000578357 NSD3Q9BZ95 1437 aa13.91□□□□□ -0.18
CUEDC1-208ENST00000578357 LOC102724428A0A0B4J2F2 783 aa13.9□□□□□ -0.18
CUEDC1-208ENST00000578357 PPM1GO15355 546 aaPredicted RBP13.9□□□□□ -0.18
CUEDC1-208ENST00000578357 SIK1P57059 783 aa13.9□□□□□ -0.18
CUEDC1-208ENST00000578357 RGPD2P0DJD1 1756 aa13.9□□□□□ -0.18
CUEDC1-208ENST00000578357 ADCY9O60503 1353 aa13.89□□□□□ -0.19
CUEDC1-208ENST00000578357 SMIM5Q71RC9 77 aa13.89□□□□□ -0.19
CUEDC1-208ENST00000578357 AMIGO3Q86WK7 504 aa13.89□□□□□ -0.19
CUEDC1-208ENST00000578357 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.89□□□□□ -0.19
CUEDC1-208ENST00000578357 TMOD3Q9NYL9 352 aa13.89□□□□□ -0.19
CUEDC1-208ENST00000578357 WWC3Q9ULE0 1092 aa13.89□□□□□ -0.19
CUEDC1-208ENST00000578357 ATP6V1AP38606 617 aa13.88□□□□□ -0.19
CUEDC1-208ENST00000578357 EMILIN1Q9Y6C2 1016 aa13.88□□□□□ -0.19
CUEDC1-208ENST00000578357 C5P01031 1676 aa13.88□□□□□ -0.19
CUEDC1-208ENST00000578357 GNPATO15228 680 aa13.87□□□□□ -0.19
CUEDC1-208ENST00000578357 IFNL2Q8IZJ0 200 aa13.87□□□□□ -0.19
CUEDC1-208ENST00000578357 LINC00116Q8NCU8 138 aa13.87□□□□□ -0.19
CUEDC1-208ENST00000578357 ASAP1Q9ULH1 1129 aa13.87□□□□□ -0.19
CUEDC1-208ENST00000578357 TGFB2P61812 414 aa13.86□□□□□ -0.19
CUEDC1-208ENST00000578357 TRAPPC3LQ5T215 181 aa13.86□□□□□ -0.19
CUEDC1-208ENST00000578357 NLGN1Q8N2Q7 840 aa13.86□□□□□ -0.19
CUEDC1-208ENST00000578357 CARD14Q9BXL6 1004 aa13.86□□□□□ -0.19
CUEDC1-208ENST00000578357 WASHC2AQ641Q2 1341 aa13.86□□□□□ -0.19
CUEDC1-208ENST00000578357 MMP10P09238 476 aa13.85□□□□□ -0.19
CUEDC1-208ENST00000578357 EYA1Q99502 592 aa13.85□□□□□ -0.19
CUEDC1-208ENST00000578357 C4BP0C0L5 1744 aa13.84□□□□□ -0.19
CUEDC1-208ENST00000578357 KIF3CO14782 793 aa13.84□□□□□ -0.19
CUEDC1-208ENST00000578357 PHKG2P15735 406 aa13.84□□□□□ -0.19
CUEDC1-208ENST00000578357 ITPK1Q13572 414 aa13.84□□□□□ -0.19
CUEDC1-208ENST00000578357 ATG3Q9NT62 314 aa13.84□□□□□ -0.19
CUEDC1-208ENST00000578357 RTCBQ9Y3I0 505 aaKnown RBP13.84□□□□□ -0.19
CUEDC1-208ENST00000578357 APLP1P51693 650 aa13.83□□□□□ -0.2
CUEDC1-208ENST00000578357 TAF1LQ8IZX4 1826 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms