RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	LTV1	Q96GA3	475 aa	Predicted RBP	6.32	□□□□□ -1.4
PPP4R1-209	ENST00000578329	SPON1	Q9HCB6	807 aa		6.32	□□□□□ -1.4
PPP4R1-209	ENST00000578329	TERF2IP	Q9NYB0	399 aa		6.32	□□□□□ -1.4
PPP4R1-209	ENST00000578329	ATF5	Q9Y2D1	282 aa	Predicted RBP	6.32	□□□□□ -1.4
PPP4R1-209	ENST00000578329	QSER1	Q2KHR3	1735 aa		6.32	□□□□□ -1.4
PPP4R1-209	ENST00000578329	UTRN	P46939	3433 aa		6.32	□□□□□ -1.4
PPP4R1-209	ENST00000578329	MAP2	P11137	1827 aa	Known RBP	6.32	□□□□□ -1.4
PPP4R1-209	ENST00000578329	PNPLA7	Q6ZV29	1317 aa		6.31	□□□□□ -1.4
PPP4R1-209	ENST00000578329	CYP27B1	O15528	508 aa		6.31	□□□□□ -1.4
PPP4R1-209	ENST00000578329	PRIM1	P49642	420 aa	Known RBP	6.31	□□□□□ -1.4
PPP4R1-209	ENST00000578329	SMIM5	Q71RC9	77 aa		6.31	□□□□□ -1.4
PPP4R1-209	ENST00000578329	EMILIN1	Q9Y6C2	1016 aa		6.31	□□□□□ -1.4
PPP4R1-209	ENST00000578329	INSR	P06213	1382 aa		6.31	□□□□□ -1.4
PPP4R1-209	ENST00000578329	PKD1L3	Q7Z443	1732 aa		6.3	□□□□□ -1.4
PPP4R1-209	ENST00000578329	NBPF14	Q5TI25	921 aa		6.3	□□□□□ -1.4
PPP4R1-209	ENST00000578329	SYT17	Q9BSW7	474 aa		6.3	□□□□□ -1.4
PPP4R1-209	ENST00000578329	FHDC1	Q9C0D6	1143 aa	Predicted RBP	6.3	□□□□□ -1.4
PPP4R1-209	ENST00000578329	NSD3	Q9BZ95	1437 aa		6.3	□□□□□ -1.4
PPP4R1-209	ENST00000578329	RTL1	A6NKG5	1358 aa		6.3	□□□□□ -1.4
PPP4R1-209	ENST00000578329	ITGB4	P16144	1822 aa		6.29	□□□□□ -1.4
PPP4R1-209	ENST00000578329	TAF1L	Q8IZX4	1826 aa		6.29	□□□□□ -1.4
PPP4R1-209	ENST00000578329	DDX54	Q8TDD1	881 aa	Known RBP	6.29	□□□□□ -1.4
PPP4R1-209	ENST00000578329	COG3	Q96JB2	828 aa		6.29	□□□□□ -1.4
PPP4R1-209	ENST00000578329	MAP3K5	Q99683	1374 aa		6.29	□□□□□ -1.4
PPP4R1-209	ENST00000578329	KAT6B	Q8WYB5	2073 aa		6.29	□□□□□ -1.4
PPP4R1-209	ENST00000578329	ZCRB1	Q8TBF4	217 aa	Known RBP	6.28	□□□□□ -1.4
PPP4R1-209	ENST00000578329	MTFR1L	Q9H019	292 aa		6.28	□□□□□ -1.4
PPP4R1-209	ENST00000578329	STK32B	Q9NY57	414 aa		6.28	□□□□□ -1.4
PPP4R1-209	ENST00000578329	POLK	Q9UBT6	870 aa		6.28	□□□□□ -1.4
PPP4R1-209	ENST00000578329	C5	P01031	1676 aa		6.27	□□□□□ -1.41
PPP4R1-209	ENST00000578329	GOLGB1	Q14789	3259 aa	Known RBP	6.27	□□□□□ -1.41
PPP4R1-209	ENST00000578329	TMF1	P82094	1093 aa		6.27	□□□□□ -1.41
PPP4R1-209	ENST00000578329	COL23A1	Q86Y22	540 aa	Predicted RBP	6.27	□□□□□ -1.41
PPP4R1-209	ENST00000578329	NLGN2	Q8NFZ4	835 aa		6.27	□□□□□ -1.41
PPP4R1-209	ENST00000578329	SLC4A9	Q96Q91	983 aa		6.27	□□□□□ -1.41
PPP4R1-209	ENST00000578329	EYA1	Q99502	592 aa		6.27	□□□□□ -1.41
PPP4R1-209	ENST00000578329	FLT4	P35916	1363 aa		6.27	□□□□□ -1.41
PPP4R1-209	ENST00000578329	WASHC2A	Q641Q2	1341 aa		6.26	□□□□□ -1.41
PPP4R1-209	ENST00000578329	SMG6	Q86US8	1419 aa	Known RBP	6.26	□□□□□ -1.41
PPP4R1-209	ENST00000578329	UBR3	Q6ZT12	1888 aa		6.26	□□□□□ -1.41
PPP4R1-209	ENST00000578329	AMPH	P49418	695 aa		6.26	□□□□□ -1.41
PPP4R1-209	ENST00000578329	NKX1-1	Q15270	411 aa	Predicted RBP	6.26	□□□□□ -1.41
PPP4R1-209	ENST00000578329	PIGB	Q92521	554 aa		6.26	□□□□□ -1.41
PPP4R1-209	ENST00000578329	KIF24	Q5T7B8	1368 aa		6.26	□□□□□ -1.41
PPP4R1-209	ENST00000578329	C4B	P0C0L5	1744 aa		6.25	□□□□□ -1.41
PPP4R1-209	ENST00000578329	KIAA1551	Q9HCM1	1747 aa		6.25	□□□□□ -1.41
PPP4R1-209	ENST00000578329	HSPA5	P11021	654 aa	Known RBP	6.25	□□□□□ -1.41
PPP4R1-209	ENST00000578329	YBX3	P16989	372 aa	Known RBP eCLIP	6.25	□□□□□ -1.41
PPP4R1-209	ENST00000578329	YY1	P25490	414 aa		6.25	□□□□□ -1.41
PPP4R1-209	ENST00000578329	ITPK1	Q13572	414 aa		6.25	□□□□□ -1.41
PPP4R1-209	ENST00000578329	EIF4A2	Q14240	407 aa	Known RBP	6.25	□□□□□ -1.41
PPP4R1-209	ENST00000578329	SLC27A3	Q5K4L6	730 aa		6.25	□□□□□ -1.41
PPP4R1-209	ENST00000578329	ARX	Q96QS3	562 aa		6.25	□□□□□ -1.41
PPP4R1-209	ENST00000578329	KDM6A	O15550	1401 aa	Predicted RBP	6.25	□□□□□ -1.41
PPP4R1-209	ENST00000578329	ADAMTS7	Q9UKP4	1686 aa		6.24	□□□□□ -1.41
PPP4R1-209	ENST00000578329	KDR	P35968	1356 aa		6.24	□□□□□ -1.41
PPP4R1-209	ENST00000578329	PALLD	Q8WX93	1383 aa		6.24	□□□□□ -1.41
PPP4R1-209	ENST00000578329	AEBP1	Q8IUX7	1158 aa		6.24	□□□□□ -1.41
PPP4R1-209	ENST00000578329	ZNF784	Q8NCA9	323 aa	Predicted RBP	6.24	□□□□□ -1.41
PPP4R1-209	ENST00000578329	LINC00116	Q8NCU8	138 aa		6.24	□□□□□ -1.41
PPP4R1-209	ENST00000578329	ASAP1	Q9ULH1	1129 aa		6.24	□□□□□ -1.41
PPP4R1-209	ENST00000578329	TIMELESS	Q9UNS1	1208 aa		6.24	□□□□□ -1.41
PPP4R1-209	ENST00000578329	MYH14	Q7Z406	1995 aa	Known RBP	6.24	□□□□□ -1.41
PPP4R1-209	ENST00000578329	IGSF1	Q8N6C5	1336 aa		6.24	□□□□□ -1.41
PPP4R1-209	ENST00000578329	CLSPN	Q9HAW4	1339 aa		6.24	□□□□□ -1.41
PPP4R1-209	ENST00000578329	PER1	O15534	1290 aa	Predicted RBP	6.23	□□□□□ -1.41
PPP4R1-209	ENST00000578329	AMER1	Q5JTC6	1135 aa	Predicted RBP	6.23	□□□□□ -1.41
PPP4R1-209	ENST00000578329	SYTL4	Q96C24	671 aa	Predicted RBP	6.23	□□□□□ -1.41
PPP4R1-209	ENST00000578329	PANK3	Q9H999	370 aa		6.23	□□□□□ -1.41
PPP4R1-209	ENST00000578329	PPP1R1B	Q9UD71	204 aa	Predicted RBP	6.23	□□□□□ -1.41
PPP4R1-209	ENST00000578329	CCNL1	Q9UK58	526 aa	Predicted RBP	6.23	□□□□□ -1.41
PPP4R1-209	ENST00000578329	CHD4	Q14839	1912 aa		6.23	□□□□□ -1.41
PPP4R1-209	ENST00000578329	CGNL1	Q0VF96	1302 aa		6.23	□□□□□ -1.41
PPP4R1-209	ENST00000578329	COL5A3	P25940	1745 aa	Predicted RBP	6.22	□□□□□ -1.41
PPP4R1-209	ENST00000578329	PHKG2	P15735	406 aa		6.22	□□□□□ -1.41
PPP4R1-209	ENST00000578329	TAT	P17735	454 aa	Predicted RBP	6.22	□□□□□ -1.41
PPP4R1-209	ENST00000578329	MSL1	Q68DK7	614 aa		6.22	□□□□□ -1.41
PPP4R1-209	ENST00000578329	MPRIP	Q6WCQ1	1025 aa		6.22	□□□□□ -1.41
PPP4R1-209	ENST00000578329	SLC16A10	Q8TF71	515 aa		6.22	□□□□□ -1.41
PPP4R1-209	ENST00000578329	PCGF6	Q9BYE7	350 aa		6.22	□□□□□ -1.41
PPP4R1-209	ENST00000578329	ATG3	Q9NT62	314 aa		6.22	□□□□□ -1.41
PPP4R1-209	ENST00000578329	PCDH11X	Q9BZA7	1347 aa		6.22	□□□□□ -1.41
PPP4R1-209	ENST00000578329	PCDH11Y	Q9BZA8	1340 aa		6.22	□□□□□ -1.41
PPP4R1-209	ENST00000578329	ZNF831	Q5JPB2	1677 aa		6.21	□□□□□ -1.42
PPP4R1-209	ENST00000578329	SLC24A1	O60721	1099 aa		6.21	□□□□□ -1.42
PPP4R1-209	ENST00000578329	TNNT2	P45379	298 aa	Predicted RBP	6.21	□□□□□ -1.42
PPP4R1-209	ENST00000578329	RAPGEF4	Q8WZA2	1011 aa		6.21	□□□□□ -1.42
PPP4R1-209	ENST00000578329	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	6.21	□□□□□ -1.42
PPP4R1-209	ENST00000578329	TFCP2L1	Q9NZI6	479 aa		6.21	□□□□□ -1.42
PPP4R1-209	ENST00000578329	TJP1	Q07157	1748 aa		6.21	□□□□□ -1.42
PPP4R1-209	ENST00000578329	KIF7	Q2M1P5	1343 aa		6.21	□□□□□ -1.42
PPP4R1-209	ENST00000578329	COL3A1	P02461	1466 aa	Predicted RBP	6.21	□□□□□ -1.42
PPP4R1-209	ENST00000578329	C4A	P0C0L4	1744 aa		6.2	□□□□□ -1.42
PPP4R1-209	ENST00000578329	LOC102724428	A0A0B4J2F2	783 aa		6.2	□□□□□ -1.42
PPP4R1-209	ENST00000578329	PPM1G	O15355	546 aa	Predicted RBP	6.2	□□□□□ -1.42
PPP4R1-209	ENST00000578329	IL13	P35225	146 aa		6.2	□□□□□ -1.42
PPP4R1-209	ENST00000578329	SIK1	P57059	783 aa		6.2	□□□□□ -1.42
PPP4R1-209	ENST00000578329	CIC	Q96RK0	1608 aa	Predicted RBP	6.2	□□□□□ -1.42
PPP4R1-209	ENST00000578329	KIF13B	Q9NQT8	1826 aa		6.2	□□□□□ -1.42
PPP4R1-209	ENST00000578329	ADCY9	O60503	1353 aa		6.19	□□□□□ -1.42

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