RNA–Protein interactions for RNA: ENST00000578318.1

ITGB4-204, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-204ENST00000578318 ZNF827Q17R98 1081 aa20.18■□□□□ 0.82
ITGB4-204ENST00000578318 LY75O60449 1722 aa20.17■□□□□ 0.82
ITGB4-204ENST00000578318 NBPF6Q5VWK0 638 aa20.17■□□□□ 0.82
ITGB4-204ENST00000578318 SYTL4Q96C24 671 aaPredicted RBP20.17■□□□□ 0.82
ITGB4-204ENST00000578318 NBPF4Q96M43 638 aa20.17■□□□□ 0.82
ITGB4-204ENST00000578318 SGIP1Q9BQI5 828 aa20.17■□□□□ 0.82
ITGB4-204ENST00000578318 CGNL1Q0VF96 1302 aa20.17■□□□□ 0.82
ITGB4-204ENST00000578318 KIF24Q5T7B8 1368 aa20.17■□□□□ 0.82
ITGB4-204ENST00000578318 PRIM1P49642 420 aaKnown RBP20.16■□□□□ 0.82
ITGB4-204ENST00000578318 TIMELESSQ9UNS1 1208 aa20.16■□□□□ 0.82
ITGB4-204ENST00000578318 AKT1S1Q96B36 256 aa20.15■□□□□ 0.82
ITGB4-204ENST00000578318 FHDC1Q9C0D6 1143 aaPredicted RBP20.15■□□□□ 0.82
ITGB4-204ENST00000578318 NSD2O96028 1365 aa20.15■□□□□ 0.82
ITGB4-204ENST00000578318 INSRP06213 1382 aa20.15■□□□□ 0.82
ITGB4-204ENST00000578318 FLT4P35916 1363 aa20.15■□□□□ 0.82
ITGB4-204ENST00000578318 RAPGEF4Q8WZA2 1011 aa20.14■□□□□ 0.81
ITGB4-204ENST00000578318 SYT17Q9BSW7 474 aa20.14■□□□□ 0.81
ITGB4-204ENST00000578318 USHBP1Q8N6Y0 703 aa20.13■□□□□ 0.81
ITGB4-204ENST00000578318 TUBGCP6Q96RT7 1819 aa20.13■□□□□ 0.81
ITGB4-204ENST00000578318 NSD3Q9BZ95 1437 aa20.12■□□□□ 0.81
ITGB4-204ENST00000578318 HSP90AB2PQ58FF8 381 aa20.12■□□□□ 0.81
ITGB4-204ENST00000578318 ARXQ96QS3 562 aa20.12■□□□□ 0.81
ITGB4-204ENST00000578318 CLSPNQ9HAW4 1339 aa20.11■□□□□ 0.81
ITGB4-204ENST00000578318 TATP17735 454 aaPredicted RBP20.11■□□□□ 0.81
ITGB4-204ENST00000578318 SLC16A10Q8TF71 515 aa20.11■□□□□ 0.81
ITGB4-204ENST00000578318 COL24A1Q17RW2 1714 aa20.1■□□□□ 0.81
ITGB4-204ENST00000578318 MAP3K5Q99683 1374 aa20.1■□□□□ 0.81
ITGB4-204ENST00000578318 CARD14Q9BXL6 1004 aa20.1■□□□□ 0.81
ITGB4-204ENST00000578318 PNPLA7Q6ZV29 1317 aa20.09■□□□□ 0.81
ITGB4-204ENST00000578318 PCDH11XQ9BZA7 1347 aa20.09■□□□□ 0.81
ITGB4-204ENST00000578318 PCDH11YQ9BZA8 1340 aa20.09■□□□□ 0.81
ITGB4-204ENST00000578318 ANKRD26Q9UPS8 1709 aa20.09■□□□□ 0.81
ITGB4-204ENST00000578318 TFCP2L1Q9NZI6 479 aa20.08■□□□□ 0.81
ITGB4-204ENST00000578318 CCNL1Q9UK58 526 aaPredicted RBP20.08■□□□□ 0.81
ITGB4-204ENST00000578318 KCNQ4P56696 695 aa20.07■□□□□ 0.8
ITGB4-204ENST00000578318 EMILIN1Q9Y6C2 1016 aa20.07■□□□□ 0.8
ITGB4-204ENST00000578318 POLD1P28340 1107 aa20.06■□□□□ 0.8
ITGB4-204ENST00000578318 PKD1L3Q7Z443 1732 aa20.06■□□□□ 0.8
ITGB4-204ENST00000578318 MAP2P11137 1827 aaKnown RBP20.06■□□□□ 0.8
ITGB4-204ENST00000578318 UTRNP46939 3433 aa20.05■□□□□ 0.8
ITGB4-204ENST00000578318 CHD4Q14839 1912 aa20.05■□□□□ 0.8
ITGB4-204ENST00000578318 C5P01031 1676 aa20.04■□□□□ 0.8
ITGB4-204ENST00000578318 NCAPD2Q15021 1401 aa20.04■□□□□ 0.8
ITGB4-204ENST00000578318 PCGF6Q9BYE7 350 aa20.03■□□□□ 0.8
ITGB4-204ENST00000578318 ITGB4P16144 1822 aa20.03■□□□□ 0.8
ITGB4-204ENST00000578318 TOGARAM1Q9Y4F4 1720 aa20.02■□□□□ 0.8
ITGB4-204ENST00000578318 PPM1GO15355 546 aaPredicted RBP20.02■□□□□ 0.8
ITGB4-204ENST00000578318 HMGB2P26583 209 aaKnown RBP20.02■□□□□ 0.8
ITGB4-204ENST00000578318 WASHC2AQ641Q2 1341 aa20.02■□□□□ 0.79
ITGB4-204ENST00000578318 CYP27B1O15528 508 aa20.01■□□□□ 0.79
ITGB4-204ENST00000578318 TAF1LQ8IZX4 1826 aa20.01■□□□□ 0.79
ITGB4-204ENST00000578318 PALLDQ8WX93 1383 aa20■□□□□ 0.79
ITGB4-204ENST00000578318 MPRIPQ6WCQ1 1025 aa19.99■□□□□ 0.79
ITGB4-204ENST00000578318 KLHL34Q8N239 644 aa19.99■□□□□ 0.79
ITGB4-204ENST00000578318 COL23A1Q86Y22 540 aaPredicted RBP19.98■□□□□ 0.79
ITGB4-204ENST00000578318 POLR3GLQ9BT43 218 aa19.98■□□□□ 0.79
ITGB4-204ENST00000578318 MSH5O43196 834 aa19.97■□□□□ 0.79
ITGB4-204ENST00000578318 SMARCC1Q92922 1105 aaPredicted RBP19.97■□□□□ 0.79
ITGB4-204ENST00000578318 EYA1Q99502 592 aa19.97■□□□□ 0.79
ITGB4-204ENST00000578318 POLKQ9UBT6 870 aa19.97■□□□□ 0.79
ITGB4-204ENST00000578318 SPG7Q9UQ90 795 aa19.97■□□□□ 0.79
ITGB4-204ENST00000578318 NKX1-1Q15270 411 aaPredicted RBP19.96■□□□□ 0.79
ITGB4-204ENST00000578318 GPR162Q16538 588 aa19.96■□□□□ 0.79
ITGB4-204ENST00000578318 EIF4G2P78344 907 aaKnown RBP eCLIP19.95■□□□□ 0.78
ITGB4-204ENST00000578318 ZNF784Q8NCA9 323 aaPredicted RBP19.95■□□□□ 0.78
ITGB4-204ENST00000578318 FLAD1Q8NFF5 587 aa19.95■□□□□ 0.78
ITGB4-204ENST00000578318 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.95■□□□□ 0.78
ITGB4-204ENST00000578318 C4BP0C0L5 1744 aa19.95■□□□□ 0.78
ITGB4-204ENST00000578318 PIGBQ92521 554 aa19.92■□□□□ 0.78
ITGB4-204ENST00000578318 PLEKHG2Q9H7P9 1386 aa19.92■□□□□ 0.78
ITGB4-204ENST00000578318 UBR3Q6ZT12 1888 aa19.91■□□□□ 0.78
ITGB4-204ENST00000578318 HSPA5P11021 654 aaKnown RBP19.91■□□□□ 0.78
ITGB4-204ENST00000578318 TNNT2P45379 298 aaPredicted RBP19.91■□□□□ 0.78
ITGB4-204ENST00000578318 EIF4A2Q14240 407 aaKnown RBP19.91■□□□□ 0.78
ITGB4-204ENST00000578318 IFNL2Q8IZJ0 200 aa19.91■□□□□ 0.78
ITGB4-204ENST00000578318 NLGN2Q8NFZ4 835 aa19.91■□□□□ 0.78
ITGB4-204ENST00000578318 MSL1Q68DK7 614 aa19.9■□□□□ 0.78
ITGB4-204ENST00000578318 PELP1Q8IZL8 1130 aaKnown RBP19.9■□□□□ 0.78
ITGB4-204ENST00000578318 AK7Q96M32 723 aa19.9■□□□□ 0.78
ITGB4-204ENST00000578318 PHKG2P15735 406 aa19.89■□□□□ 0.77
ITGB4-204ENST00000578318 PANK3Q9H999 370 aa19.89■□□□□ 0.77
ITGB4-204ENST00000578318 TMOD3Q9NYL9 352 aa19.89■□□□□ 0.77
ITGB4-204ENST00000578318 LOC102724428A0A0B4J2F2 783 aa19.87■□□□□ 0.77
ITGB4-204ENST00000578318 SIK1P57059 783 aa19.87■□□□□ 0.77
ITGB4-204ENST00000578318 IGSF1Q8N6C5 1336 aa19.86■□□□□ 0.77
ITGB4-204ENST00000578318 CCER1Q8TC90 406 aaPredicted RBP19.86■□□□□ 0.77
ITGB4-204ENST00000578318 GOLGB1Q14789 3259 aaKnown RBP19.86■□□□□ 0.77
ITGB4-204ENST00000578318 CD2APQ9Y5K6 639 aa19.85■□□□□ 0.77
ITGB4-204ENST00000578318 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.84■□□□□ 0.77
ITGB4-204ENST00000578318 GRIN3BO60391 1043 aa19.84■□□□□ 0.77
ITGB4-204ENST00000578318 PHF14O94880 888 aa19.84■□□□□ 0.77
ITGB4-204ENST00000578318 SSFA2P28290 1259 aa19.84■□□□□ 0.77
ITGB4-204ENST00000578318 AMIGO3Q86WK7 504 aa19.84■□□□□ 0.77
ITGB4-204ENST00000578318 LINC00116Q8NCU8 138 aa19.84■□□□□ 0.77
ITGB4-204ENST00000578318 ASAP1Q9ULH1 1129 aa19.83■□□□□ 0.77
ITGB4-204ENST00000578318 HSP90AB1P08238 724 aaKnown RBP19.82■□□□□ 0.76
ITGB4-204ENST00000578318 YBX3P16989 372 aaKnown RBP eCLIP19.82■□□□□ 0.76
ITGB4-204ENST00000578318 ATP6V1AP38606 617 aa19.82■□□□□ 0.76
ITGB4-204ENST00000578318 ITPK1Q13572 414 aa19.81■□□□□ 0.76
ITGB4-204ENST00000578318 PLEKHO1Q53GL0 409 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms