RNA–Protein interactions for RNA: ENST00000578085.1

CCR7-202, Transcript of C-C motif chemokine receptor 7, humanhuman

TSL 3

Gene CCR7, Length 787 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR7-202ENST00000578085 NBPF6Q5VWK0 638 aa10.43□□□□□ -0.74
CCR7-202ENST00000578085 COG3Q96JB2 828 aa10.43□□□□□ -0.74
CCR7-202ENST00000578085 NBPF4Q96M43 638 aa10.43□□□□□ -0.74
CCR7-202ENST00000578085 GGNBP2Q9H3C7 697 aa10.43□□□□□ -0.74
CCR7-202ENST00000578085 LY75O60449 1722 aa10.43□□□□□ -0.74
CCR7-202ENST00000578085 RTL1A6NKG5 1358 aa10.42□□□□□ -0.74
CCR7-202ENST00000578085 FYB1O15117 783 aa10.42□□□□□ -0.74
CCR7-202ENST00000578085 AMPHP49418 695 aa10.42□□□□□ -0.74
CCR7-202ENST00000578085 ZNF784Q8NCA9 323 aaPredicted RBP10.42□□□□□ -0.74
CCR7-202ENST00000578085 SYTL4Q96C24 671 aaPredicted RBP10.42□□□□□ -0.74
CCR7-202ENST00000578085 USP47Q96K76 1375 aa10.41□□□□□ -0.74
CCR7-202ENST00000578085 DCAF8L1A6NGE4 600 aa10.41□□□□□ -0.74
CCR7-202ENST00000578085 SLC27A3Q5K4L6 730 aa10.41□□□□□ -0.74
CCR7-202ENST00000578085 ZCRB1Q8TBF4 217 aaKnown RBP10.41□□□□□ -0.74
CCR7-202ENST00000578085 NLGN2Q8NFZ4 835 aa10.4□□□□□ -0.74
CCR7-202ENST00000578085 TOGARAM1Q9Y4F4 1720 aa10.4□□□□□ -0.74
CCR7-202ENST00000578085 HSP90AB2PQ58FF8 381 aa10.39□□□□□ -0.75
CCR7-202ENST00000578085 KIF20BQ96Q89 1820 aa10.39□□□□□ -0.75
CCR7-202ENST00000578085 CARD14Q9BXL6 1004 aa10.38□□□□□ -0.75
CCR7-202ENST00000578085 TFCP2L1Q9NZI6 479 aa10.38□□□□□ -0.75
CCR7-202ENST00000578085 CCNL1Q9UK58 526 aaPredicted RBP10.38□□□□□ -0.75
CCR7-202ENST00000578085 INSRP06213 1382 aa10.38□□□□□ -0.75
CCR7-202ENST00000578085 NCAPD2Q15021 1401 aa10.37□□□□□ -0.75
CCR7-202ENST00000578085 AMIGO3Q86WK7 504 aa10.37□□□□□ -0.75
CCR7-202ENST00000578085 COL23A1Q86Y22 540 aaPredicted RBP10.37□□□□□ -0.75
CCR7-202ENST00000578085 KLHL34Q8N239 644 aa10.37□□□□□ -0.75
CCR7-202ENST00000578085 SLC16A10Q8TF71 515 aa10.37□□□□□ -0.75
CCR7-202ENST00000578085 NSD3Q9BZ95 1437 aa10.37□□□□□ -0.75
CCR7-202ENST00000578085 EMILIN1Q9Y6C2 1016 aa10.37□□□□□ -0.75
CCR7-202ENST00000578085 C5P01031 1676 aa10.37□□□□□ -0.75
CCR7-202ENST00000578085 FLT4P35916 1363 aa10.37□□□□□ -0.75
CCR7-202ENST00000578085 SMG6Q86US8 1419 aaKnown RBP10.36□□□□□ -0.75
CCR7-202ENST00000578085 CYP27B1O15528 508 aa10.36□□□□□ -0.75
CCR7-202ENST00000578085 TMF1P82094 1093 aa10.36□□□□□ -0.75
CCR7-202ENST00000578085 MSL1Q68DK7 614 aa10.36□□□□□ -0.75
CCR7-202ENST00000578085 PKD1L3Q7Z443 1732 aa10.36□□□□□ -0.75
CCR7-202ENST00000578085 ANKRD26Q9UPS8 1709 aa10.36□□□□□ -0.75
CCR7-202ENST00000578085 SMIM5Q71RC9 77 aa10.35□□□□□ -0.75
CCR7-202ENST00000578085 RAPGEF4Q8WZA2 1011 aa10.35□□□□□ -0.75
CCR7-202ENST00000578085 PALLDQ8WX93 1383 aa10.35□□□□□ -0.75
CCR7-202ENST00000578085 YBX3P16989 372 aaKnown RBP eCLIP10.34□□□□□ -0.75
CCR7-202ENST00000578085 TATP17735 454 aaPredicted RBP10.34□□□□□ -0.75
CCR7-202ENST00000578085 POLD1P28340 1107 aa10.34□□□□□ -0.75
CCR7-202ENST00000578085 GPR162Q16538 588 aa10.34□□□□□ -0.75
CCR7-202ENST00000578085 CGNL1Q0VF96 1302 aa10.33□□□□□ -0.76
CCR7-202ENST00000578085 PCDH11XQ9BZA7 1347 aa10.33□□□□□ -0.76
CCR7-202ENST00000578085 PCDH11YQ9BZA8 1340 aa10.33□□□□□ -0.76
CCR7-202ENST00000578085 C4BP0C0L5 1744 aa10.33□□□□□ -0.76
CCR7-202ENST00000578085 PELP1Q8IZL8 1130 aaKnown RBP10.33□□□□□ -0.76
CCR7-202ENST00000578085 KIF24Q5T7B8 1368 aa10.33□□□□□ -0.76
CCR7-202ENST00000578085 KAT6BQ8WYB5 2073 aa10.33□□□□□ -0.76
CCR7-202ENST00000578085 CHD4Q14839 1912 aa10.33□□□□□ -0.76
CCR7-202ENST00000578085 TAF1LQ8IZX4 1826 aa10.33□□□□□ -0.76
CCR7-202ENST00000578085 MSH5O43196 834 aa10.32□□□□□ -0.76
CCR7-202ENST00000578085 SLC24A1O60721 1099 aa10.32□□□□□ -0.76
CCR7-202ENST00000578085 MPRIPQ6WCQ1 1025 aa10.32□□□□□ -0.76
CCR7-202ENST00000578085 MAP2P11137 1827 aaKnown RBP10.31□□□□□ -0.76
CCR7-202ENST00000578085 ITGB4P16144 1822 aa10.31□□□□□ -0.76
CCR7-202ENST00000578085 C1QTNF8P60827 252 aa10.31□□□□□ -0.76
CCR7-202ENST00000578085 PIGBQ92521 554 aa10.31□□□□□ -0.76
CCR7-202ENST00000578085 PPM1GO15355 546 aaPredicted RBP10.3□□□□□ -0.76
CCR7-202ENST00000578085 EYA1Q99502 592 aa10.3□□□□□ -0.76
CCR7-202ENST00000578085 SENP3-EIF4A1A0A087X0R7 540 aa10.29□□□□□ -0.76
CCR7-202ENST00000578085 TRIM26Q12899 539 aaPredicted RBP10.29□□□□□ -0.76
CCR7-202ENST00000578085 NKX1-1Q15270 411 aaPredicted RBP10.29□□□□□ -0.76
CCR7-202ENST00000578085 LINC00116Q8NCU8 138 aa10.29□□□□□ -0.76
CCR7-202ENST00000578085 POLKQ9UBT6 870 aa10.29□□□□□ -0.76
CCR7-202ENST00000578085 UBR3Q6ZT12 1888 aa10.29□□□□□ -0.76
CCR7-202ENST00000578085 WASHC2AQ641Q2 1341 aa10.29□□□□□ -0.76
CCR7-202ENST00000578085 CEP350Q5VT06 3117 aa10.28□□□□□ -0.76
CCR7-202ENST00000578085 PHF14O94880 888 aa10.28□□□□□ -0.76
CCR7-202ENST00000578085 ITPK1Q13572 414 aa10.28□□□□□ -0.76
CCR7-202ENST00000578085 CDCA8Q53HL2 280 aa10.28□□□□□ -0.76
CCR7-202ENST00000578085 ATP10DQ9P241 1426 aa10.27□□□□□ -0.77
CCR7-202ENST00000578085 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.27□□□□□ -0.77
CCR7-202ENST00000578085 PHKG2P15735 406 aa10.27□□□□□ -0.77
CCR7-202ENST00000578085 EIF4A2Q14240 407 aaKnown RBP10.27□□□□□ -0.77
CCR7-202ENST00000578085 WWC3Q9ULE0 1092 aa10.27□□□□□ -0.77
CCR7-202ENST00000578085 ASAP1Q9ULH1 1129 aa10.27□□□□□ -0.77
CCR7-202ENST00000578085 ADCY9O60503 1353 aa10.26□□□□□ -0.77
CCR7-202ENST00000578085 KDRP35968 1356 aa10.26□□□□□ -0.77
CCR7-202ENST00000578085 LOC102724428A0A0B4J2F2 783 aa10.26□□□□□ -0.77
CCR7-202ENST00000578085 TNNT2P45379 298 aaPredicted RBP10.26□□□□□ -0.77
CCR7-202ENST00000578085 SIK1P57059 783 aa10.26□□□□□ -0.77
CCR7-202ENST00000578085 SMARCC1Q92922 1105 aaPredicted RBP10.26□□□□□ -0.77
CCR7-202ENST00000578085 AK7Q96M32 723 aa10.26□□□□□ -0.77
CCR7-202ENST00000578085 GIGYF1O75420 1035 aaPredicted RBP10.25□□□□□ -0.77
CCR7-202ENST00000578085 SLC4A9Q96Q91 983 aa10.25□□□□□ -0.77
CCR7-202ENST00000578085 ATG3Q9NT62 314 aa10.25□□□□□ -0.77
CCR7-202ENST00000578085 SPG7Q9UQ90 795 aa10.25□□□□□ -0.77
CCR7-202ENST00000578085 CD2APQ9Y5K6 639 aa10.25□□□□□ -0.77
CCR7-202ENST00000578085 KDM6AO15550 1401 aaPredicted RBP10.24□□□□□ -0.77
CCR7-202ENST00000578085 KIAA1551Q9HCM1 1747 aa10.24□□□□□ -0.77
CCR7-202ENST00000578085 FLAD1Q8NFF5 587 aa10.24□□□□□ -0.77
CCR7-202ENST00000578085 POLR3GLQ9BT43 218 aa10.24□□□□□ -0.77
CCR7-202ENST00000578085 TMOD3Q9NYL9 352 aa10.24□□□□□ -0.77
CCR7-202ENST00000578085 IGSF1Q8N6C5 1336 aa10.24□□□□□ -0.77
CCR7-202ENST00000578085 GNPATO15228 680 aa10.23□□□□□ -0.77
CCR7-202ENST00000578085 GRIN3BO60391 1043 aa10.23□□□□□ -0.77
CCR7-202ENST00000578085 SSFA2P28290 1259 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms