RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 MTMR14Q8NCE2 650 aa8.77□□□□□ -1.01
KRT39-203ENST00000578078 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.76□□□□□ -1.01
KRT39-203ENST00000578078 MRE11P49959 708 aa8.76□□□□□ -1.01
KRT39-203ENST00000578078 SRPK2P78362 688 aaKnown RBP8.76□□□□□ -1.01
KRT39-203ENST00000578078 MDM2Q00987 491 aaPredicted RBP8.76□□□□□ -1.01
KRT39-203ENST00000578078 NUTM2DQ5VT03 806 aaPredicted RBP8.76□□□□□ -1.01
KRT39-203ENST00000578078 MYSM1Q5VVJ2 828 aa8.76□□□□□ -1.01
KRT39-203ENST00000578078 CLK2P49760 499 aaKnown RBP8.75□□□□□ -1.01
KRT39-203ENST00000578078 RRP1P56182 461 aaKnown RBP8.75□□□□□ -1.01
KRT39-203ENST00000578078 FBXO31Q5XUX0 539 aaPredicted RBP8.75□□□□□ -1.01
KRT39-203ENST00000578078 TMEM132EQ6IEE7 984 aa8.75□□□□□ -1.01
KRT39-203ENST00000578078 EVC2Q86UK5 1308 aa8.75□□□□□ -1.01
KRT39-203ENST00000578078 ZMYM3Q14202 1370 aa8.75□□□□□ -1.01
KRT39-203ENST00000578078 BLMP54132 1417 aaPredicted RBP8.75□□□□□ -1.01
KRT39-203ENST00000578078 ALKQ9UM73 1620 aa8.75□□□□□ -1.01
KRT39-203ENST00000578078 GOLGA6L3A6NEY3 463 aa8.75□□□□□ -1.01
KRT39-203ENST00000578078 MLECQ14165 292 aa8.75□□□□□ -1.01
KRT39-203ENST00000578078 TAF3Q5VWG9 929 aa8.75□□□□□ -1.01
KRT39-203ENST00000578078 A2ML1A8K2U0 1454 aa8.74□□□□□ -1.01
KRT39-203ENST00000578078 TULP4Q9NRJ4 1543 aa8.74□□□□□ -1.01
KRT39-203ENST00000578078 CARNS1A5YM72 827 aa8.74□□□□□ -1.01
KRT39-203ENST00000578078 ESPNB1AK53 854 aa8.74□□□□□ -1.01
KRT39-203ENST00000578078 FRAT2O75474 233 aaPredicted RBP8.74□□□□□ -1.01
KRT39-203ENST00000578078 PPP2R1AP30153 589 aa8.74□□□□□ -1.01
KRT39-203ENST00000578078 ABL2P42684 1182 aa8.74□□□□□ -1.01
KRT39-203ENST00000578078 FAM161AQ3B820 660 aa8.74□□□□□ -1.01
KRT39-203ENST00000578078 SETD1AO15047 1707 aaKnown RBP8.73□□□□□ -1.01
KRT39-203ENST00000578078 YTHDC2Q9H6S0 1430 aaKnown RBP8.73□□□□□ -1.01
KRT39-203ENST00000578078 A0A0U1RQG5 324 aaPredicted RBP8.73□□□□□ -1.01
KRT39-203ENST00000578078 SOCS7O14512 581 aa8.73□□□□□ -1.01
KRT39-203ENST00000578078 MAP3K13O43283 966 aa8.73□□□□□ -1.01
KRT39-203ENST00000578078 KIF20AO95235 890 aa8.73□□□□□ -1.01
KRT39-203ENST00000578078 FOXK1P85037 733 aa8.73□□□□□ -1.01
KRT39-203ENST00000578078 PTPRMP28827 1452 aa8.72□□□□□ -1.01
KRT39-203ENST00000578078 RIMS2Q9UQ26 1411 aa8.72□□□□□ -1.01
KRT39-203ENST00000578078 NINLQ9Y2I6 1382 aa8.72□□□□□ -1.01
KRT39-203ENST00000578078 PTGER2P43116 358 aa8.72□□□□□ -1.01
KRT39-203ENST00000578078 BECN1Q14457 450 aa8.72□□□□□ -1.01
KRT39-203ENST00000578078 WDR43Q15061 677 aaKnown RBP eCLIP8.72□□□□□ -1.01
KRT39-203ENST00000578078 REM2Q8IYK8 340 aaPredicted RBP8.72□□□□□ -1.01
KRT39-203ENST00000578078 NSD3Q9BZ95 1437 aa8.72□□□□□ -1.01
KRT39-203ENST00000578078 RFX1P22670 979 aa8.72□□□□□ -1.01
KRT39-203ENST00000578078 PPP2R2DQ66LE6 453 aa8.72□□□□□ -1.01
KRT39-203ENST00000578078 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.72□□□□□ -1.01
KRT39-203ENST00000578078 IPO4Q8TEX9 1081 aaKnown RBP8.72□□□□□ -1.01
KRT39-203ENST00000578078 VRTNQ9H8Y1 702 aa8.72□□□□□ -1.01
KRT39-203ENST00000578078 UBR1Q8IWV7 1749 aa8.72□□□□□ -1.01
KRT39-203ENST00000578078 DLC1Q96QB1 1528 aa8.71□□□□□ -1.01
KRT39-203ENST00000578078 KNDC1Q76NI1 1749 aa8.71□□□□□ -1.02
KRT39-203ENST00000578078 ANKRD26Q9UPS8 1709 aa8.71□□□□□ -1.02
KRT39-203ENST00000578078 PRM3Q9NNZ6 103 aa8.71□□□□□ -1.02
KRT39-203ENST00000578078 FAM217BQ9NTX9 383 aaPredicted RBP8.71□□□□□ -1.02
KRT39-203ENST00000578078 GNEQ9Y223 722 aaKnown RBP8.71□□□□□ -1.02
KRT39-203ENST00000578078 FER1L4A9Z1Z3 1794 aa8.7□□□□□ -1.02
KRT39-203ENST00000578078 XRCC6P12956 609 aaKnown RBP eCLIP8.7□□□□□ -1.02
KRT39-203ENST00000578078 PTMSP20962 102 aa8.7□□□□□ -1.02
KRT39-203ENST00000578078 CANXP27824 592 aaKnown RBP8.7□□□□□ -1.02
KRT39-203ENST00000578078 TNNT2P45379 298 aaPredicted RBP8.7□□□□□ -1.02
KRT39-203ENST00000578078 MAP3K9P80192 1104 aa8.7□□□□□ -1.02
KRT39-203ENST00000578078 CENPQQ7L2Z9 268 aaPredicted RBP8.7□□□□□ -1.02
KRT39-203ENST00000578078 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.7□□□□□ -1.02
KRT39-203ENST00000578078 PHOX2BQ99453 314 aa8.7□□□□□ -1.02
KRT39-203ENST00000578078 MYH16Q9H6N6 1097 aa8.7□□□□□ -1.02
KRT39-203ENST00000578078 KIAA1522Q9P206 1035 aaPredicted RBP8.7□□□□□ -1.02
KRT39-203ENST00000578078 STK26Q9P289 416 aa8.7□□□□□ -1.02
KRT39-203ENST00000578078 NSD2O96028 1365 aa8.7□□□□□ -1.02
KRT39-203ENST00000578078 ATAD2Q6PL18 1390 aa8.7□□□□□ -1.02
KRT39-203ENST00000578078 ANKRD36BQ8N2N9 1353 aa8.7□□□□□ -1.02
KRT39-203ENST00000578078 TNRQ92752 1358 aa8.7□□□□□ -1.02
KRT39-203ENST00000578078 NRXN3Q9Y4C0 1643 aa8.7□□□□□ -1.02
KRT39-203ENST00000578078 CGNL1Q0VF96 1302 aa8.69□□□□□ -1.02
KRT39-203ENST00000578078 PRIM1P49642 420 aaKnown RBP8.69□□□□□ -1.02
KRT39-203ENST00000578078 HS1BP3Q53T59 392 aa8.69□□□□□ -1.02
KRT39-203ENST00000578078 KIF12Q96FN5 646 aa8.69□□□□□ -1.02
KRT39-203ENST00000578078 CARD14Q9BXL6 1004 aa8.69□□□□□ -1.02
KRT39-203ENST00000578078 POGKQ9P215 609 aa8.69□□□□□ -1.02
KRT39-203ENST00000578078 HDGFP51858 240 aaKnown RBP8.69□□□□□ -1.02
KRT39-203ENST00000578078 TBC1D2BQ9UPU7 963 aa8.69□□□□□ -1.02
KRT39-203ENST00000578078 KIF20BQ96Q89 1820 aa8.68□□□□□ -1.02
KRT39-203ENST00000578078 C3P01024 1663 aa8.68□□□□□ -1.02
KRT39-203ENST00000578078 OFD1O75665 1012 aa8.68□□□□□ -1.02
KRT39-203ENST00000578078 GOLGA2Q08379 1002 aa8.68□□□□□ -1.02
KRT39-203ENST00000578078 DMTNQ08495 405 aa8.68□□□□□ -1.02
KRT39-203ENST00000578078 SAFB2Q14151 953 aaKnown RBP eCLIP8.68□□□□□ -1.02
KRT39-203ENST00000578078 HDGFL1Q5TGJ6 251 aa8.68□□□□□ -1.02
KRT39-203ENST00000578078 ADAMTS19Q8TE59 1207 aa8.68□□□□□ -1.02
KRT39-203ENST00000578078 DDX12PQ92771 950 aa8.68□□□□□ -1.02
KRT39-203ENST00000578078 PRAM1Q96QH2 718 aa8.68□□□□□ -1.02
KRT39-203ENST00000578078 GTPBP4Q9BZE4 634 aaKnown RBP8.68□□□□□ -1.02
KRT39-203ENST00000578078 SLC12A5Q9H2X9 1139 aa8.68□□□□□ -1.02
KRT39-203ENST00000578078 ADAMTS8Q9UP79 889 aa8.68□□□□□ -1.02
KRT39-203ENST00000578078 FARP1Q9Y4F1 1045 aaPredicted RBP8.68□□□□□ -1.02
KRT39-203ENST00000578078 KDM2BQ8NHM5 1336 aa8.67□□□□□ -1.02
KRT39-203ENST00000578078 SENP3-EIF4A1A0A087X0R7 540 aa8.67□□□□□ -1.02
KRT39-203ENST00000578078 TMEM88BA6NKF7 163 aa8.67□□□□□ -1.02
KRT39-203ENST00000578078 MORC1Q86VD1 984 aa8.67□□□□□ -1.02
KRT39-203ENST00000578078 TXNDC2Q86VQ3 553 aa8.67□□□□□ -1.02
KRT39-203ENST00000578078 TRIM44Q96DX7 344 aaPredicted RBP8.67□□□□□ -1.02
KRT39-203ENST00000578078 MRRFQ96E11 262 aaKnown RBP8.67□□□□□ -1.02
KRT39-203ENST00000578078 RCAN3Q9UKA8 241 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms