RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 ARHGEF25Q86VW2 580 aa35.37■■■■□ 3.25
LIMD2-203ENST00000578067 ZBTB7CA1YPR0 619 aa35.35■■■■□ 3.25
LIMD2-203ENST00000578067 SKAP1Q86WV1 359 aa35.35■■■■□ 3.25
LIMD2-203ENST00000578067 DDX19BQ9UMR2 479 aa35.35■■■■□ 3.25
LIMD2-203ENST00000578067 MSH6P52701 1360 aa35.34■■■■□ 3.25
LIMD2-203ENST00000578067 ARHGAP45Q92619 1136 aa35.33■■■■□ 3.25
LIMD2-203ENST00000578067 PCDHB15Q9Y5E8 787 aa35.33■■■■□ 3.25
LIMD2-203ENST00000578067 STRCQ7RTU9 1775 aa35.32■■■■□ 3.25
LIMD2-203ENST00000578067 KIAA0232Q92628 1395 aa35.32■■■■□ 3.25
LIMD2-203ENST00000578067 HAP1P54257 671 aaPredicted RBP35.32■■■■□ 3.24
LIMD2-203ENST00000578067 ITPRIPQ8IWB1 547 aa35.32■■■■□ 3.24
LIMD2-203ENST00000578067 TMEM57Q8N5G2 664 aa35.31■■■■□ 3.24
LIMD2-203ENST00000578067 USHBP1Q8N6Y0 703 aa35.31■■■■□ 3.24
LIMD2-203ENST00000578067 GNAT3A8MTJ3 354 aa35.3■■■■□ 3.24
LIMD2-203ENST00000578067 NBPF6Q5VWK0 638 aa35.3■■■■□ 3.24
LIMD2-203ENST00000578067 NBPF4Q96M43 638 aa35.3■■■■□ 3.24
LIMD2-203ENST00000578067 ALS2Q96Q42 1657 aa35.3■■■■□ 3.24
LIMD2-203ENST00000578067 PLEKHG5O94827 1062 aa35.28■■■■□ 3.24
LIMD2-203ENST00000578067 NPHP3Q7Z494 1330 aa35.26■■■■□ 3.24
LIMD2-203ENST00000578067 PDE4AP27815 886 aa35.26■■■■□ 3.23
LIMD2-203ENST00000578067 MAP3K5Q99683 1374 aa35.26■■■■□ 3.23
LIMD2-203ENST00000578067 RWDD1Q9H446 243 aaPredicted RBP35.25■■■■□ 3.23
LIMD2-203ENST00000578067 DDX17Q92841 729 aaKnown RBP35.24■■■■□ 3.23
LIMD2-203ENST00000578067 TSPYL4Q9UJ04 414 aa35.23■■■■□ 3.23
LIMD2-203ENST00000578067 LRRC37A3O60309 1634 aa35.23■■■■□ 3.23
LIMD2-203ENST00000578067 XIRP1Q702N8 1843 aaKnown RBP35.23■■■■□ 3.23
LIMD2-203ENST00000578067 KRT24Q2M2I5 525 aa35.23■■■■□ 3.23
LIMD2-203ENST00000578067 BACH2Q9BYV9 841 aa35.22■■■■□ 3.23
LIMD2-203ENST00000578067 MIS18AQ9NYP9 233 aa35.22■■■■□ 3.23
LIMD2-203ENST00000578067 MED1Q15648 1581 aaPredicted RBP35.21■■■■□ 3.23
LIMD2-203ENST00000578067 LRRC59Q96AG4 307 aaKnown RBP35.21■■■■□ 3.23
LIMD2-203ENST00000578067 ANKRD24Q8TF21 1146 aa35.2■■■■□ 3.23
LIMD2-203ENST00000578067 ZBTB40Q9NUA8 1239 aa35.2■■■■□ 3.22
LIMD2-203ENST00000578067 API5Q9BZZ5 524 aaKnown RBP35.19■■■■□ 3.22
LIMD2-203ENST00000578067 IL17REQ8NFR9 667 aa35.18■■■■□ 3.22
LIMD2-203ENST00000578067 NCAPD2Q15021 1401 aa35.18■■■■□ 3.22
LIMD2-203ENST00000578067 RGPD2P0DJD1 1756 aa35.17■■■■□ 3.22
LIMD2-203ENST00000578067 ABCC4O15439 1325 aa35.17■■■■□ 3.22
LIMD2-203ENST00000578067 RGS3P49796 1198 aa35.16■■■■□ 3.22
LIMD2-203ENST00000578067 AXIN2Q9Y2T1 843 aa35.16■■■■□ 3.22
LIMD2-203ENST00000578067 TNS3Q68CZ2 1445 aa35.16■■■■□ 3.22
LIMD2-203ENST00000578067 CHMP4BQ9H444 224 aaKnown RBP35.16■■■■□ 3.22
LIMD2-203ENST00000578067 PXDNQ92626 1479 aa35.15■■■■□ 3.22
LIMD2-203ENST00000578067 ZNF335Q9H4Z2 1342 aaPredicted RBP35.15■■■■□ 3.22
LIMD2-203ENST00000578067 BABAM1Q9NWV8 329 aa35.15■■■■□ 3.22
LIMD2-203ENST00000578067 ZC3H6P61129 1189 aaKnown RBP35.14■■■■□ 3.22
LIMD2-203ENST00000578067 HDAC1Q13547 482 aaPredicted RBP35.13■■■■□ 3.21
LIMD2-203ENST00000578067 TAF7Q15545 349 aaPredicted RBP35.11■■■■□ 3.21
LIMD2-203ENST00000578067 PLEKHO1Q53GL0 409 aaPredicted RBP35.11■■■■□ 3.21
LIMD2-203ENST00000578067 SPATA31A3Q5VYP0 1347 aa35.11■■■■□ 3.21
LIMD2-203ENST00000578067 CAMTA1Q9Y6Y1 1673 aa35.11■■■■□ 3.21
LIMD2-203ENST00000578067 ZBTB7BO15156 539 aaPredicted RBP35.1■■■■□ 3.21
LIMD2-203ENST00000578067 BRINP3Q76B58 766 aa35.1■■■■□ 3.21
LIMD2-203ENST00000578067 AMOTQ4VCS5 1084 aa35.1■■■■□ 3.21
LIMD2-203ENST00000578067 CEMIPQ8WUJ3 1361 aa35.08■■■■□ 3.21
LIMD2-203ENST00000578067 ERBB3P21860 1342 aa35.07■■■■□ 3.21
LIMD2-203ENST00000578067 AKAP4Q5JQC9 854 aa35.06■■■■□ 3.2
LIMD2-203ENST00000578067 PTPRCP08575 1304 aa35.06■■■■□ 3.2
LIMD2-203ENST00000578067 ZNF530Q6P9A1 599 aaPredicted RBP35.05■■■■□ 3.2
LIMD2-203ENST00000578067 PDZRN3Q9UPQ7 1066 aa35.05■■■■□ 3.2
LIMD2-203ENST00000578067 SLAIN2Q9P270 581 aa35.05■■■■□ 3.2
LIMD2-203ENST00000578067 RGPD5Q99666 1765 aa35.04■■■■□ 3.2
LIMD2-203ENST00000578067 FAM161AQ3B820 660 aa35.04■■■■□ 3.2
LIMD2-203ENST00000578067 SOS1Q07889 1333 aaPredicted RBP35.04■■■■□ 3.2
LIMD2-203ENST00000578067 CABLES1Q8TDN4 633 aa35.03■■■■□ 3.2
LIMD2-203ENST00000578067 LMO7Q8WWI1 1683 aa35.03■■■■□ 3.2
LIMD2-203ENST00000578067 SLC4A2P04920 1241 aa35.03■■■■□ 3.2
LIMD2-203ENST00000578067 RGS12O14924 1447 aa35.01■■■■□ 3.2
LIMD2-203ENST00000578067 INTS3Q68E01 1043 aaKnown RBP35.01■■■■□ 3.19
LIMD2-203ENST00000578067 LGR6Q9HBX8 967 aa35.01■■■■□ 3.19
LIMD2-203ENST00000578067 ANP32AP39687 249 aaKnown RBP35■■■■□ 3.19
LIMD2-203ENST00000578067 CRYBG1Q9Y4K1 1723 aa34.99■■■■□ 3.19
LIMD2-203ENST00000578067 COL18A1P39060 1754 aa34.99■■■■□ 3.19
LIMD2-203ENST00000578067 C8orf34Q49A92 452 aa34.98■■■■□ 3.19
LIMD2-203ENST00000578067 C1orf141Q5JVX7 400 aa34.98■■■■□ 3.19
LIMD2-203ENST00000578067 ABCC6O95255 1503 aa34.98■■■■□ 3.19
LIMD2-203ENST00000578067 SMC5Q8IY18 1101 aa34.97■■■■□ 3.19
LIMD2-203ENST00000578067 STK31Q9BXU1 1019 aa34.96■■■■□ 3.19
LIMD2-203ENST00000578067 MSH5O43196 834 aa34.96■■■■□ 3.19
LIMD2-203ENST00000578067 CCDC30Q5VVM6 783 aa34.96■■■■□ 3.19
LIMD2-203ENST00000578067 CPDO75976 1380 aa34.95■■■■□ 3.19
LIMD2-203ENST00000578067 SOS2Q07890 1332 aaPredicted RBP34.95■■■■□ 3.19
LIMD2-203ENST00000578067 NLRP2Q9NX02 1062 aa34.94■■■■□ 3.18
LIMD2-203ENST00000578067 TEFQ10587 303 aa34.93■■■■□ 3.18
LIMD2-203ENST00000578067 MPRIPQ6WCQ1 1025 aa34.93■■■■□ 3.18
LIMD2-203ENST00000578067 OVOS2A0A0G2JMS6 1433 aa34.93■■■■□ 3.18
LIMD2-203ENST00000578067 RNMTO43148 476 aaKnown RBP34.93■■■■□ 3.18
LIMD2-203ENST00000578067 CHRNA2Q15822 529 aa34.91■■■■□ 3.18
LIMD2-203ENST00000578067 G2E3Q7L622 706 aa34.91■■■■□ 3.18
LIMD2-203ENST00000578067 RAPGEF4Q8WZA2 1011 aa34.91■■■■□ 3.18
LIMD2-203ENST00000578067 C1orf115Q9H7X2 142 aa34.91■■■■□ 3.18
LIMD2-203ENST00000578067 CSB-PGBD3P0DP91 1061 aa34.89■■■■□ 3.18
LIMD2-203ENST00000578067 FAM208AQ9UK61 1670 aaKnown RBP34.88■■■■□ 3.17
LIMD2-203ENST00000578067 EIF4A1P60842 406 aaKnown RBP34.88■■■■□ 3.17
LIMD2-203ENST00000578067 NPM2Q86SE8 214 aaKnown RBP34.88■■■■□ 3.17
LIMD2-203ENST00000578067 KDM3BQ7LBC6 1761 aa34.87■■■■□ 3.17
LIMD2-203ENST00000578067 BTBD11A6QL63 1104 aa34.86■■■■□ 3.17
LIMD2-203ENST00000578067 TATP17735 454 aaPredicted RBP34.86■■■■□ 3.17
LIMD2-203ENST00000578067 HOXB7P09629 217 aa34.84■■■■□ 3.17
LIMD2-203ENST00000578067 NECTIN2Q92692 538 aa34.84■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms