RNA–Protein interactions for RNA: ENST00000577940.6

DDX42-204, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 1,427 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-204ENST00000577940 TNS1Q9HBL0 1735 aaKnown RBP11.48□□□□□ -0.57
DDX42-204ENST00000577940 HMGB2P26583 209 aaKnown RBP11.48□□□□□ -0.57
DDX42-204ENST00000577940 HSP90AB2PQ58FF8 381 aa11.48□□□□□ -0.57
DDX42-204ENST00000577940 SLC27A3Q5K4L6 730 aa11.48□□□□□ -0.57
DDX42-204ENST00000577940 SYTL4Q96C24 671 aaPredicted RBP11.48□□□□□ -0.57
DDX42-204ENST00000577940 POLR3GLQ9BT43 218 aa11.48□□□□□ -0.57
DDX42-204ENST00000577940 LRRC37A3O60309 1634 aa11.48□□□□□ -0.57
DDX42-204ENST00000577940 LRP5O75197 1615 aa11.48□□□□□ -0.57
DDX42-204ENST00000577940 TATP17735 454 aaPredicted RBP11.47□□□□□ -0.57
DDX42-204ENST00000577940 PRIM1P49642 420 aaKnown RBP11.47□□□□□ -0.57
DDX42-204ENST00000577940 INSRP06213 1382 aa11.47□□□□□ -0.57
DDX42-204ENST00000577940 FLT4P35916 1363 aa11.47□□□□□ -0.57
DDX42-204ENST00000577940 PPM1GO15355 546 aaPredicted RBP11.46□□□□□ -0.57
DDX42-204ENST00000577940 PEAK1Q9H792 1746 aa11.46□□□□□ -0.57
DDX42-204ENST00000577940 NSD3Q9BZ95 1437 aa11.46□□□□□ -0.58
DDX42-204ENST00000577940 USP54Q70EL1 1684 aa11.46□□□□□ -0.58
DDX42-204ENST00000577940 ZBTB7AO95365 584 aa11.45□□□□□ -0.58
DDX42-204ENST00000577940 MTFR1LQ9H019 292 aa11.45□□□□□ -0.58
DDX42-204ENST00000577940 USHBP1Q8N6Y0 703 aa11.44□□□□□ -0.58
DDX42-204ENST00000577940 ATF5Q9Y2D1 282 aaPredicted RBP11.44□□□□□ -0.58
DDX42-204ENST00000577940 HSPA5P11021 654 aaKnown RBP11.43□□□□□ -0.58
DDX42-204ENST00000577940 EMILIN1Q9Y6C2 1016 aa11.43□□□□□ -0.58
DDX42-204ENST00000577940 WASHC2AQ641Q2 1341 aa11.43□□□□□ -0.58
DDX42-204ENST00000577940 PDGFDQ9GZP0 370 aaPredicted RBP11.43□□□□□ -0.58
DDX42-204ENST00000577940 LRRC4BQ9NT99 713 aa11.43□□□□□ -0.58
DDX42-204ENST00000577940 SPG7Q9UQ90 795 aa11.43□□□□□ -0.58
DDX42-204ENST00000577940 PCDH11XQ9BZA7 1347 aa11.43□□□□□ -0.58
DDX42-204ENST00000577940 PCDH11YQ9BZA8 1340 aa11.43□□□□□ -0.58
DDX42-204ENST00000577940 PTGER2P43116 358 aa11.42□□□□□ -0.58
DDX42-204ENST00000577940 SLC16A10Q8TF71 515 aa11.42□□□□□ -0.58
DDX42-204ENST00000577940 RBM42Q9BTD8 480 aaKnown RBP11.42□□□□□ -0.58
DDX42-204ENST00000577940 PANK3Q9H999 370 aa11.42□□□□□ -0.58
DDX42-204ENST00000577940 TFCP2L1Q9NZI6 479 aa11.42□□□□□ -0.58
DDX42-204ENST00000577940 POLKQ9UBT6 870 aa11.42□□□□□ -0.58
DDX42-204ENST00000577940 AKT1S1Q96B36 256 aa11.41□□□□□ -0.58
DDX42-204ENST00000577940 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.41□□□□□ -0.581e-7■■□□□ 12.9
DDX42-204ENST00000577940 CCNL1Q9UK58 526 aaPredicted RBP11.41□□□□□ -0.58
DDX42-204ENST00000577940 RREB1Q92766 1687 aa11.4□□□□□ -0.58
DDX42-204ENST00000577940 TNNT2P45379 298 aaPredicted RBP11.4□□□□□ -0.58
DDX42-204ENST00000577940 ZNF827Q17R98 1081 aa11.4□□□□□ -0.58
DDX42-204ENST00000577940 MEGF6O75095 1541 aa11.39□□□□□ -0.59
DDX42-204ENST00000577940 POLD1P28340 1107 aa11.39□□□□□ -0.59
DDX42-204ENST00000577940 MPRIPQ6WCQ1 1025 aa11.39□□□□□ -0.59
DDX42-204ENST00000577940 SMARCC1Q92922 1105 aaPredicted RBP11.39□□□□□ -0.59
DDX42-204ENST00000577940 ARXQ96QS3 562 aa11.39□□□□□ -0.59
DDX42-204ENST00000577940 EYA1Q99502 592 aa11.39□□□□□ -0.59
DDX42-204ENST00000577940 KNSTRNQ9Y448 316 aa11.39□□□□□ -0.59
DDX42-204ENST00000577940 RGPD3A6NKT7 1758 aaPredicted RBP11.38□□□□□ -0.59
DDX42-204ENST00000577940 RGPD4Q7Z3J3 1758 aa11.38□□□□□ -0.59
DDX42-204ENST00000577940 NUP188Q5SRE5 1749 aa11.38□□□□□ -0.59
DDX42-204ENST00000577940 CYP27B1O15528 508 aa11.38□□□□□ -0.59
DDX42-204ENST00000577940 NKX1-1Q15270 411 aaPredicted RBP11.38□□□□□ -0.59
DDX42-204ENST00000577940 CHRDL2Q6WN34 429 aa11.38□□□□□ -0.59
DDX42-204ENST00000577940 MORC1Q86VD1 984 aa11.38□□□□□ -0.59
DDX42-204ENST00000577940 NSD2O96028 1365 aa11.37□□□□□ -0.59
DDX42-204ENST00000577940 SGIP1Q9BQI5 828 aa11.37□□□□□ -0.59
DDX42-204ENST00000577940 SYT17Q9BSW7 474 aa11.37□□□□□ -0.59
DDX42-204ENST00000577940 RGPD5Q99666 1765 aa11.37□□□□□ -0.59
DDX42-204ENST00000577940 YY1P25490 414 aa11.36□□□□□ -0.59
DDX42-204ENST00000577940 KCNQ4P56696 695 aa11.36□□□□□ -0.59
DDX42-204ENST00000577940 EIF4A2Q14240 407 aaKnown RBP11.36□□□□□ -0.59
DDX42-204ENST00000577940 IFNL2Q8IZJ0 200 aa11.36□□□□□ -0.59
DDX42-204ENST00000577940 FLAD1Q8NFF5 587 aa11.36□□□□□ -0.59
DDX42-204ENST00000577940 FHDC1Q9C0D6 1143 aaPredicted RBP11.36□□□□□ -0.59
DDX42-204ENST00000577940 LTN1O94822 1766 aa11.36□□□□□ -0.59
DDX42-204ENST00000577940 SLC4A2P04920 1241 aa11.35□□□□□ -0.59
DDX42-204ENST00000577940 NHSQ6T4R5 1651 aa11.35□□□□□ -0.59
DDX42-204ENST00000577940 PNPLA7Q6ZV29 1317 aa11.35□□□□□ -0.59
DDX42-204ENST00000577940 FAM208AQ9UK61 1670 aaKnown RBP11.35□□□□□ -0.59
DDX42-204ENST00000577940 WNK3Q9BYP7 1800 aa11.35□□□□□ -0.59
DDX42-204ENST00000577940 HSP90AB1P08238 724 aaKnown RBP11.35□□□□□ -0.59
DDX42-204ENST00000577940 PIGBQ92521 554 aa11.35□□□□□ -0.59
DDX42-204ENST00000577940 TMOD3Q9NYL9 352 aa11.35□□□□□ -0.59
DDX42-204ENST00000577940 PLEKHG2Q9H7P9 1386 aa11.34□□□□□ -0.59
DDX42-204ENST00000577940 AMOTQ4VCS5 1084 aa11.34□□□□□ -0.59
DDX42-204ENST00000577940 PLEKHO1Q53GL0 409 aaPredicted RBP11.34□□□□□ -0.59
DDX42-204ENST00000577940 PALLDQ8WX93 1383 aa11.33□□□□□ -0.6
DDX42-204ENST00000577940 SBF2Q86WG5 1849 aa11.33□□□□□ -0.6
DDX42-204ENST00000577940 PHKG2P15735 406 aa11.33□□□□□ -0.6
DDX42-204ENST00000577940 NCAPD2Q15021 1401 aa11.32□□□□□ -0.6
DDX42-204ENST00000577940 COL23A1Q86Y22 540 aaPredicted RBP11.32□□□□□ -0.6
DDX42-204ENST00000577940 AK7Q96M32 723 aa11.32□□□□□ -0.6
DDX42-204ENST00000577940 MAP3K5Q99683 1374 aa11.32□□□□□ -0.6
DDX42-204ENST00000577940 IGSF1Q8N6C5 1336 aa11.31□□□□□ -0.6
DDX42-204ENST00000577940 ERVV-2B6SEH9 535 aa11.31□□□□□ -0.6
DDX42-204ENST00000577940 DIEXFQ68CQ4 756 aaKnown RBP11.31□□□□□ -0.6
DDX42-204ENST00000577940 KLHL34Q8N239 644 aa11.31□□□□□ -0.6
DDX42-204ENST00000577940 DCAF5Q96JK2 942 aa11.31□□□□□ -0.6
DDX42-204ENST00000577940 LOC102724428A0A0B4J2F2 783 aa11.3□□□□□ -0.6
DDX42-204ENST00000577940 SIK1P57059 783 aa11.3□□□□□ -0.6
DDX42-204ENST00000577940 AMER1Q5JTC6 1135 aaPredicted RBP11.3□□□□□ -0.6
DDX42-204ENST00000577940 KIF7Q2M1P5 1343 aa11.3□□□□□ -0.6
DDX42-204ENST00000577940 GPR162Q16538 588 aa11.29□□□□□ -0.6
DDX42-204ENST00000577940 C1orf141Q5JVX7 400 aa11.29□□□□□ -0.6
DDX42-204ENST00000577940 CASZ1Q86V15 1759 aa11.29□□□□□ -0.6
DDX42-204ENST00000577940 ATP6V1AP38606 617 aa11.28□□□□□ -0.6
DDX42-204ENST00000577940 MTHFSP49914 203 aa11.28□□□□□ -0.6
DDX42-204ENST00000577940 CABP4P57796 275 aa11.28□□□□□ -0.6
DDX42-204ENST00000577940 SULT6B1Q6IMI4 303 aa11.28□□□□□ -0.6
DDX42-204ENST00000577940 ZNF530Q6P9A1 599 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms