RNA–Protein interactions for RNA: ENST00000577939.1

SUPT6H-204, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-204ENST00000577939 TATP17735 454 aaPredicted RBP13.95□□□□□ -0.18
SUPT6H-204ENST00000577939 ITGB4P16144 1822 aa13.94□□□□□ -0.18
SUPT6H-204ENST00000577939 PPM1GO15355 546 aaPredicted RBP13.94□□□□□ -0.18
SUPT6H-204ENST00000577939 ZCRB1Q8TBF4 217 aaKnown RBP13.94□□□□□ -0.18
SUPT6H-204ENST00000577939 DDX54Q8TDD1 881 aaKnown RBP13.94□□□□□ -0.18
SUPT6H-204ENST00000577939 NCAPD2Q15021 1401 aa13.93□□□□□ -0.18
SUPT6H-204ENST00000577939 FBLN1P23142 703 aa13.93□□□□□ -0.18
SUPT6H-204ENST00000577939 HSP90AB2PQ58FF8 381 aa13.93□□□□□ -0.18
SUPT6H-204ENST00000577939 ACSBG1Q96GR2 724 aa13.93□□□□□ -0.18
SUPT6H-204ENST00000577939 PANK3Q9H999 370 aa13.93□□□□□ -0.18
SUPT6H-204ENST00000577939 STK32BQ9NY57 414 aa13.93□□□□□ -0.18
SUPT6H-204ENST00000577939 KNSTRNQ9Y448 316 aa13.93□□□□□ -0.18
SUPT6H-204ENST00000577939 EMILIN1Q9Y6C2 1016 aa13.93□□□□□ -0.18
SUPT6H-204ENST00000577939 HMGB2P26583 209 aaKnown RBP13.92□□□□□ -0.18
SUPT6H-204ENST00000577939 WASHC2AQ641Q2 1341 aa13.91□□□□□ -0.18
SUPT6H-204ENST00000577939 TOGARAM1Q9Y4F4 1720 aa13.91□□□□□ -0.18
SUPT6H-204ENST00000577939 TXNRD1Q16881 649 aa13.91□□□□□ -0.18
SUPT6H-204ENST00000577939 NBPF6Q5VWK0 638 aa13.91□□□□□ -0.18
SUPT6H-204ENST00000577939 USHBP1Q8N6Y0 703 aa13.91□□□□□ -0.18
SUPT6H-204ENST00000577939 SYTL4Q96C24 671 aaPredicted RBP13.91□□□□□ -0.18
SUPT6H-204ENST00000577939 NBPF4Q96M43 638 aa13.91□□□□□ -0.18
SUPT6H-204ENST00000577939 TUBGCP6Q96RT7 1819 aa13.9□□□□□ -0.18
SUPT6H-204ENST00000577939 C5P01031 1676 aa13.9□□□□□ -0.18
SUPT6H-204ENST00000577939 KCNQ2O43526 872 aa13.89□□□□□ -0.19
SUPT6H-204ENST00000577939 SPON1Q9HCB6 807 aa13.89□□□□□ -0.19
SUPT6H-204ENST00000577939 TAF1LQ8IZX4 1826 aa13.89□□□□□ -0.19
SUPT6H-204ENST00000577939 KIF7Q2M1P5 1343 aa13.89□□□□□ -0.19
SUPT6H-204ENST00000577939 TNNT2P45379 298 aaPredicted RBP13.88□□□□□ -0.19
SUPT6H-204ENST00000577939 SLC27A3Q5K4L6 730 aa13.88□□□□□ -0.19
SUPT6H-204ENST00000577939 MORC1Q86VD1 984 aa13.88□□□□□ -0.19
SUPT6H-204ENST00000577939 PPP1R1BQ9UD71 204 aaPredicted RBP13.88□□□□□ -0.19
SUPT6H-204ENST00000577939 SPG7Q9UQ90 795 aa13.88□□□□□ -0.19
SUPT6H-204ENST00000577939 PTF1AQ7RTS3 328 aa13.87□□□□□ -0.19
SUPT6H-204ENST00000577939 ANO8Q9HCE9 1232 aaPredicted RBP13.87□□□□□ -0.19
SUPT6H-204ENST00000577939 POLKQ9UBT6 870 aa13.87□□□□□ -0.19
SUPT6H-204ENST00000577939 VIRMAQ69YN4 1812 aaKnown RBP13.86□□□□□ -0.19
SUPT6H-204ENST00000577939 SLC15A2Q16348 729 aa13.85□□□□□ -0.19
SUPT6H-204ENST00000577939 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.85□□□□□ -0.194e-8■■□□□ 14.2
SUPT6H-204ENST00000577939 PRIM1P49642 420 aaKnown RBP13.84□□□□□ -0.19
SUPT6H-204ENST00000577939 IGSF1Q8N6C5 1336 aa13.84□□□□□ -0.19
SUPT6H-204ENST00000577939 EIF4A2Q14240 407 aaKnown RBP13.83□□□□□ -0.2
SUPT6H-204ENST00000577939 PROM2Q8N271 834 aa13.83□□□□□ -0.2
SUPT6H-204ENST00000577939 EYA1Q99502 592 aa13.83□□□□□ -0.2
SUPT6H-204ENST00000577939 DCAF8L1A6NGE4 600 aa13.82□□□□□ -0.2
SUPT6H-204ENST00000577939 SMARCC1Q92922 1105 aaPredicted RBP13.82□□□□□ -0.2
SUPT6H-204ENST00000577939 NPC1L1Q9UHC9 1359 aa13.82□□□□□ -0.2
SUPT6H-204ENST00000577939 SCN11AQ9UI33 1791 aa13.81□□□□□ -0.2
SUPT6H-204ENST00000577939 IFNL2Q8IZJ0 200 aa13.81□□□□□ -0.2
SUPT6H-204ENST00000577939 MTFR1LQ9H019 292 aa13.81□□□□□ -0.2
SUPT6H-204ENST00000577939 CCNL1Q9UK58 526 aaPredicted RBP13.81□□□□□ -0.2
SUPT6H-204ENST00000577939 PALLDQ8WX93 1383 aa13.81□□□□□ -0.2
SUPT6H-204ENST00000577939 C4BP0C0L5 1744 aa13.81□□□□□ -0.2
SUPT6H-204ENST00000577939 COL24A1Q17RW2 1714 aa13.81□□□□□ -0.2
SUPT6H-204ENST00000577939 ZNF831Q5JPB2 1677 aa13.8□□□□□ -0.2
SUPT6H-204ENST00000577939 HSP90AB1P08238 724 aaKnown RBP13.8□□□□□ -0.2
SUPT6H-204ENST00000577939 AMER1Q5JTC6 1135 aaPredicted RBP13.8□□□□□ -0.2
SUPT6H-204ENST00000577939 UBR3Q6ZT12 1888 aa13.79□□□□□ -0.2
SUPT6H-204ENST00000577939 CYP27B1O15528 508 aa13.79□□□□□ -0.2
SUPT6H-204ENST00000577939 AMOTQ4VCS5 1084 aa13.79□□□□□ -0.2
SUPT6H-204ENST00000577939 ZBTB7AO95365 584 aa13.78□□□□□ -0.2
SUPT6H-204ENST00000577939 NKX1-1Q15270 411 aaPredicted RBP13.78□□□□□ -0.2
SUPT6H-204ENST00000577939 PLEKHO1Q53GL0 409 aaPredicted RBP13.78□□□□□ -0.2
SUPT6H-204ENST00000577939 MPRIPQ6WCQ1 1025 aa13.78□□□□□ -0.2
SUPT6H-204ENST00000577939 TMOD3Q9NYL9 352 aa13.78□□□□□ -0.2
SUPT6H-204ENST00000577939 TFCP2L1Q9NZI6 479 aa13.78□□□□□ -0.2
SUPT6H-204ENST00000577939 PHKG2P15735 406 aa13.77□□□□□ -0.21
SUPT6H-204ENST00000577939 KDRP35968 1356 aa13.77□□□□□ -0.21
SUPT6H-204ENST00000577939 ZNF827Q17R98 1081 aa13.77□□□□□ -0.21
SUPT6H-204ENST00000577939 C1orf141Q5JVX7 400 aa13.77□□□□□ -0.21
SUPT6H-204ENST00000577939 SLC16A10Q8TF71 515 aa13.77□□□□□ -0.21
SUPT6H-204ENST00000577939 LRRC4BQ9NT99 713 aa13.77□□□□□ -0.21
SUPT6H-204ENST00000577939 POLD1P28340 1107 aa13.76□□□□□ -0.21
SUPT6H-204ENST00000577939 ZNF530Q6P9A1 599 aaPredicted RBP13.76□□□□□ -0.21
SUPT6H-204ENST00000577939 COL5A3P25940 1745 aaPredicted RBP13.76□□□□□ -0.21
SUPT6H-204ENST00000577939 CHD4Q14839 1912 aa13.75□□□□□ -0.21
SUPT6H-204ENST00000577939 CC2D1BQ5T0F9 858 aaKnown RBP13.75□□□□□ -0.21
SUPT6H-204ENST00000577939 FLAD1Q8NFF5 587 aa13.75□□□□□ -0.21
SUPT6H-204ENST00000577939 AKT1S1Q96B36 256 aa13.75□□□□□ -0.21
SUPT6H-204ENST00000577939 DCAF5Q96JK2 942 aa13.74□□□□□ -0.21
SUPT6H-204ENST00000577939 AK7Q96M32 723 aa13.74□□□□□ -0.21
SUPT6H-204ENST00000577939 CICQ96RK0 1608 aaPredicted RBP13.74□□□□□ -0.21
SUPT6H-204ENST00000577939 PNPLA7Q6ZV29 1317 aa13.73□□□□□ -0.21
SUPT6H-204ENST00000577939 ERVV-2B6SEH9 535 aa13.73□□□□□ -0.21
SUPT6H-204ENST00000577939 MTHFSP49914 203 aa13.73□□□□□ -0.21
SUPT6H-204ENST00000577939 SULT6B1Q6IMI4 303 aa13.73□□□□□ -0.21
SUPT6H-204ENST00000577939 ATF5Q9Y2D1 282 aaPredicted RBP13.73□□□□□ -0.21
SUPT6H-204ENST00000577939 MAP3K5Q99683 1374 aa13.72□□□□□ -0.21
SUPT6H-204ENST00000577939 PER1O15534 1290 aaPredicted RBP13.72□□□□□ -0.21
SUPT6H-204ENST00000577939 MSH5O43196 834 aa13.72□□□□□ -0.21
SUPT6H-204ENST00000577939 DIAPH1O60610 1272 aaKnown RBP13.72□□□□□ -0.21
SUPT6H-204ENST00000577939 CFAP53Q96M91 514 aa13.72□□□□□ -0.21
SUPT6H-204ENST00000577939 IL13P35225 146 aa13.71□□□□□ -0.21
SUPT6H-204ENST00000577939 PTGER2P43116 358 aa13.71□□□□□ -0.21
SUPT6H-204ENST00000577939 PIGBQ92521 554 aa13.71□□□□□ -0.21
SUPT6H-204ENST00000577939 PDGFDQ9GZP0 370 aaPredicted RBP13.71□□□□□ -0.21
SUPT6H-204ENST00000577939 COL3A1P02461 1466 aaPredicted RBP13.71□□□□□ -0.21
SUPT6H-204ENST00000577939 KDM6AO15550 1401 aaPredicted RBP13.71□□□□□ -0.22
SUPT6H-204ENST00000577939 MRC1P22897 1456 aa13.7□□□□□ -0.22
SUPT6H-204ENST00000577939 LOC102724428A0A0B4J2F2 783 aa13.7□□□□□ -0.22
SUPT6H-204ENST00000577939 KCNQ4P56696 695 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms