RNA–Protein interactions for RNA: ENST00000577929.1

EIF4A1-206, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-206ENST00000577929 USHBP1Q8N6Y0 703 aa26.25■■□□□ 1.79
EIF4A1-206ENST00000577929 SGIP1Q9BQI5 828 aa26.25■■□□□ 1.79
EIF4A1-206ENST00000577929 RGPD2P0DJD1 1756 aa26.25■■□□□ 1.79
EIF4A1-206ENST00000577929 FYB1O15117 783 aa26.24■■□□□ 1.79
EIF4A1-206ENST00000577929 PAPPAQ13219 1627 aa26.24■■□□□ 1.79
EIF4A1-206ENST00000577929 USP47Q96K76 1375 aa26.23■■□□□ 1.79
EIF4A1-206ENST00000577929 CDCA8Q53HL2 280 aa26.23■■□□□ 1.79
EIF4A1-206ENST00000577929 NBPF6Q5VWK0 638 aa26.23■■□□□ 1.79
EIF4A1-206ENST00000577929 SLC16A10Q8TF71 515 aa26.23■■□□□ 1.79
EIF4A1-206ENST00000577929 AKT1S1Q96B36 256 aa26.23■■□□□ 1.79
EIF4A1-206ENST00000577929 NBPF4Q96M43 638 aa26.23■■□□□ 1.79
EIF4A1-206ENST00000577929 GPR162Q16538 588 aa26.22■■□□□ 1.79
EIF4A1-206ENST00000577929 PELP1Q8IZL8 1130 aaKnown RBP26.22■■□□□ 1.79
EIF4A1-206ENST00000577929 RTL1A6NKG5 1358 aa26.21■■□□□ 1.79
EIF4A1-206ENST00000577929 TATP17735 454 aaPredicted RBP26.21■■□□□ 1.79
EIF4A1-206ENST00000577929 CCNL1Q9UK58 526 aaPredicted RBP26.21■■□□□ 1.79
EIF4A1-206ENST00000577929 DOT1LQ8TEK3 1739 aa26.21■■□□□ 1.79
EIF4A1-206ENST00000577929 TRIM26Q12899 539 aaPredicted RBP26.2■■□□□ 1.78
EIF4A1-206ENST00000577929 MEGF6O75095 1541 aa26.19■■□□□ 1.78
EIF4A1-206ENST00000577929 PNPLA7Q6ZV29 1317 aa26.18■■□□□ 1.78
EIF4A1-206ENST00000577929 CGNL1Q0VF96 1302 aa26.17■■□□□ 1.78
EIF4A1-206ENST00000577929 HSP90AB2PQ58FF8 381 aa26.17■■□□□ 1.78
EIF4A1-206ENST00000577929 ZNF784Q8NCA9 323 aaPredicted RBP26.17■■□□□ 1.78
EIF4A1-206ENST00000577929 PPM1GO15355 546 aaPredicted RBP26.16■■□□□ 1.78
EIF4A1-206ENST00000577929 FLT4P35916 1363 aa26.12■■□□□ 1.77
EIF4A1-206ENST00000577929 SHANK3Q9BYB0 1731 aa26.12■■□□□ 1.77
EIF4A1-206ENST00000577929 MPRIPQ6WCQ1 1025 aa26.12■■□□□ 1.77
EIF4A1-206ENST00000577929 POLR3GLQ9BT43 218 aa26.12■■□□□ 1.77
EIF4A1-206ENST00000577929 UTRNP46939 3433 aa26.12■■□□□ 1.77
EIF4A1-206ENST00000577929 CHD4Q14839 1912 aa26.12■■□□□ 1.77
EIF4A1-206ENST00000577929 PCDH11XQ9BZA7 1347 aa26.12■■□□□ 1.77
EIF4A1-206ENST00000577929 PCDH11YQ9BZA8 1340 aa26.12■■□□□ 1.77
EIF4A1-206ENST00000577929 KIF20BQ96Q89 1820 aa26.11■■□□□ 1.77
EIF4A1-206ENST00000577929 NSD2O96028 1365 aa26.11■■□□□ 1.77
EIF4A1-206ENST00000577929 MAP3K5Q99683 1374 aa26.11■■□□□ 1.77
EIF4A1-206ENST00000577929 LY75O60449 1722 aa26.11■■□□□ 1.77
EIF4A1-206ENST00000577929 QSER1Q2KHR3 1735 aa26.11■■□□□ 1.77
EIF4A1-206ENST00000577929 INSRP06213 1382 aa26.1■■□□□ 1.77
EIF4A1-206ENST00000577929 TUBGCP6Q96RT7 1819 aa26.07■■□□□ 1.76
EIF4A1-206ENST00000577929 HMGB2P26583 209 aaKnown RBP26.07■■□□□ 1.76
EIF4A1-206ENST00000577929 MSL1Q68DK7 614 aa26.07■■□□□ 1.76
EIF4A1-206ENST00000577929 COL23A1Q86Y22 540 aaPredicted RBP26.07■■□□□ 1.76
EIF4A1-206ENST00000577929 EMILIN1Q9Y6C2 1016 aa26.07■■□□□ 1.76
EIF4A1-206ENST00000577929 NSD3Q9BZ95 1437 aa26.05■■□□□ 1.76
EIF4A1-206ENST00000577929 NLGN2Q8NFZ4 835 aa26.05■■□□□ 1.76
EIF4A1-206ENST00000577929 CARD14Q9BXL6 1004 aa26.05■■□□□ 1.76
EIF4A1-206ENST00000577929 KIF24Q5T7B8 1368 aa26.05■■□□□ 1.76
EIF4A1-206ENST00000577929 PALLDQ8WX93 1383 aa26.03■■□□□ 1.76
EIF4A1-206ENST00000577929 PCGF6Q9BYE7 350 aa26.02■■□□□ 1.76
EIF4A1-206ENST00000577929 SPG7Q9UQ90 795 aa26.02■■□□□ 1.76
EIF4A1-206ENST00000577929 CYP27B1O15528 508 aa26.01■■□□□ 1.75
EIF4A1-206ENST00000577929 FLAD1Q8NFF5 587 aa26.01■■□□□ 1.75
EIF4A1-206ENST00000577929 SMARCC1Q92922 1105 aaPredicted RBP26.01■■□□□ 1.75
EIF4A1-206ENST00000577929 AK7Q96M32 723 aa26■■□□□ 1.75
EIF4A1-206ENST00000577929 TNNT2P45379 298 aaPredicted RBP25.98■■□□□ 1.75
EIF4A1-206ENST00000577929 C5P01031 1676 aa25.98■■□□□ 1.75
EIF4A1-206ENST00000577929 GRIN3BO60391 1043 aa25.97■■□□□ 1.75
EIF4A1-206ENST00000577929 PHF14O94880 888 aa25.97■■□□□ 1.75
EIF4A1-206ENST00000577929 SENP3-EIF4A1A0A087X0R7 540 aa25.96■■□□□ 1.75
EIF4A1-206ENST00000577929 TIMELESSQ9UNS1 1208 aa25.96■■□□□ 1.75
EIF4A1-206ENST00000577929 COL24A1Q17RW2 1714 aa25.96■■□□□ 1.75
EIF4A1-206ENST00000577929 C1QTNF8P60827 252 aa25.94■■□□□ 1.74
EIF4A1-206ENST00000577929 PIGBQ92521 554 aa25.94■■□□□ 1.74
EIF4A1-206ENST00000577929 TMOD3Q9NYL9 352 aa25.94■■□□□ 1.74
EIF4A1-206ENST00000577929 MAP2P11137 1827 aaKnown RBP25.93■■□□□ 1.74
EIF4A1-206ENST00000577929 ITGB4P16144 1822 aa25.93■■□□□ 1.74
EIF4A1-206ENST00000577929 WASHC2AQ641Q2 1341 aa25.93■■□□□ 1.74
EIF4A1-206ENST00000577929 EYA1Q99502 592 aa25.93■■□□□ 1.74
EIF4A1-206ENST00000577929 GIGYF1O75420 1035 aaPredicted RBP25.92■■□□□ 1.74
EIF4A1-206ENST00000577929 GOLGB1Q14789 3259 aaKnown RBP25.92■■□□□ 1.74
EIF4A1-206ENST00000577929 YBX3P16989 372 aaKnown RBP eCLIP25.91■■□□□ 1.746e-10■□□□□ 10.3
EIF4A1-206ENST00000577929 TAF1LQ8IZX4 1826 aa25.91■■□□□ 1.74
EIF4A1-206ENST00000577929 IFNL2Q8IZJ0 200 aa25.9■■□□□ 1.74
EIF4A1-206ENST00000577929 POLKQ9UBT6 870 aa25.9■■□□□ 1.74
EIF4A1-206ENST00000577929 PKD1L3Q7Z443 1732 aa25.89■■□□□ 1.74
EIF4A1-206ENST00000577929 TOGARAM1Q9Y4F4 1720 aa25.89■■□□□ 1.74
EIF4A1-206ENST00000577929 NKX1-1Q15270 411 aaPredicted RBP25.89■■□□□ 1.74
EIF4A1-206ENST00000577929 SMIM5Q71RC9 77 aa25.89■■□□□ 1.74
EIF4A1-206ENST00000577929 CD2APQ9Y5K6 639 aa25.89■■□□□ 1.74
EIF4A1-206ENST00000577929 C4BP0C0L5 1744 aa25.88■■□□□ 1.73
EIF4A1-206ENST00000577929 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.88■■□□□ 1.73
EIF4A1-206ENST00000577929 LOC102724428A0A0B4J2F2 783 aa25.88■■□□□ 1.73
EIF4A1-206ENST00000577929 SIK1P57059 783 aa25.88■■□□□ 1.73
EIF4A1-206ENST00000577929 ATP6V1AP38606 617 aa25.87■■□□□ 1.73
EIF4A1-206ENST00000577929 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.87■■□□□ 1.73
EIF4A1-206ENST00000577929 ASAP1Q9ULH1 1129 aa25.86■■□□□ 1.73
EIF4A1-206ENST00000577929 PHKG2P15735 406 aa25.85■■□□□ 1.73
EIF4A1-206ENST00000577929 EIF4A2Q14240 407 aaKnown RBP25.85■■□□□ 1.73
EIF4A1-206ENST00000577929 WWC3Q9ULE0 1092 aa25.85■■□□□ 1.73
EIF4A1-206ENST00000577929 GNPATO15228 680 aa25.84■■□□□ 1.73
EIF4A1-206ENST00000577929 SSFA2P28290 1259 aa25.83■■□□□ 1.73
EIF4A1-206ENST00000577929 EIF4G2P78344 907 aaKnown RBP eCLIP25.83■■□□□ 1.732e-7■□□□□ 10.3
EIF4A1-206ENST00000577929 LINC00116Q8NCU8 138 aa25.83■■□□□ 1.73
EIF4A1-206ENST00000577929 ANKRD26Q9UPS8 1709 aa25.83■■□□□ 1.72
EIF4A1-206ENST00000577929 AMIGO3Q86WK7 504 aa25.82■■□□□ 1.72
EIF4A1-206ENST00000577929 NCAPD2Q15021 1401 aa25.81■■□□□ 1.72
EIF4A1-206ENST00000577929 PANK3Q9H999 370 aa25.81■■□□□ 1.72
EIF4A1-206ENST00000577929 CLSPNQ9HAW4 1339 aa25.81■■□□□ 1.72
EIF4A1-206ENST00000577929 RBM42Q9BTD8 480 aaKnown RBP25.8■■□□□ 1.72
EIF4A1-206ENST00000577929 ITPK1Q13572 414 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms