RNA–Protein interactions for RNA: ENST00000577854.1

CDKN2A-211, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 442 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-211ENST00000577854 TNS1Q9HBL0 1735 aaKnown RBP12.49□□□□□ -0.41
CDKN2A-211ENST00000577854 PARD3Q8TEW0 1356 aa12.49□□□□□ -0.41
CDKN2A-211ENST00000577854 PER1O15534 1290 aaPredicted RBP12.49□□□□□ -0.41
CDKN2A-211ENST00000577854 ZEB1P37275 1124 aaPredicted RBP12.49□□□□□ -0.41
CDKN2A-211ENST00000577854 MTHFSP49914 203 aa12.49□□□□□ -0.41
CDKN2A-211ENST00000577854 R3HDM1Q15032 1099 aaKnown RBP12.49□□□□□ -0.41
CDKN2A-211ENST00000577854 NBPF14Q5TI25 921 aa12.49□□□□□ -0.41
CDKN2A-211ENST00000577854 SPG7Q9UQ90 795 aa12.49□□□□□ -0.41
CDKN2A-211ENST00000577854 RGPD2P0DJD1 1756 aa12.48□□□□□ -0.41
CDKN2A-211ENST00000577854 PRIM1P49642 420 aaKnown RBP12.48□□□□□ -0.41
CDKN2A-211ENST00000577854 MAP2P11137 1827 aaKnown RBP12.48□□□□□ -0.41
CDKN2A-211ENST00000577854 BCL9O00512 1426 aa12.47□□□□□ -0.41
CDKN2A-211ENST00000577854 SULT6B1Q6IMI4 303 aa12.46□□□□□ -0.41
CDKN2A-211ENST00000577854 IGSF1Q8N6C5 1336 aa12.45□□□□□ -0.42
CDKN2A-211ENST00000577854 U2SURPO15042 1029 aaKnown RBP12.45□□□□□ -0.42
CDKN2A-211ENST00000577854 PLSCR1O15162 318 aa12.45□□□□□ -0.42
CDKN2A-211ENST00000577854 DIAPH1O60610 1272 aaKnown RBP12.45□□□□□ -0.42
CDKN2A-211ENST00000577854 CFAP53Q96M91 514 aa12.45□□□□□ -0.42
CDKN2A-211ENST00000577854 NPC1L1Q9UHC9 1359 aa12.44□□□□□ -0.42
CDKN2A-211ENST00000577854 CYP27B1O15528 508 aa12.44□□□□□ -0.42
CDKN2A-211ENST00000577854 HMOX1P09601 288 aa12.44□□□□□ -0.42
CDKN2A-211ENST00000577854 DDX10Q13206 875 aaKnown RBP12.44□□□□□ -0.42
CDKN2A-211ENST00000577854 TXNRD1Q16881 649 aa12.44□□□□□ -0.42
CDKN2A-211ENST00000577854 MPRIPQ6WCQ1 1025 aa12.44□□□□□ -0.42
CDKN2A-211ENST00000577854 AEBP1Q8IUX7 1158 aa12.44□□□□□ -0.42
CDKN2A-211ENST00000577854 IL13P35225 146 aa12.43□□□□□ -0.42
CDKN2A-211ENST00000577854 PLEKHO1Q53GL0 409 aaPredicted RBP12.43□□□□□ -0.42
CDKN2A-211ENST00000577854 C1orf141Q5JVX7 400 aa12.43□□□□□ -0.42
CDKN2A-211ENST00000577854 ZNF530Q6P9A1 599 aaPredicted RBP12.43□□□□□ -0.42
CDKN2A-211ENST00000577854 IFNL2Q8IZJ0 200 aa12.43□□□□□ -0.42
CDKN2A-211ENST00000577854 NHSQ6T4R5 1651 aa12.42□□□□□ -0.42
CDKN2A-211ENST00000577854 STK32BQ9NY57 414 aa12.42□□□□□ -0.42
CDKN2A-211ENST00000577854 NCAPD2Q15021 1401 aa12.41□□□□□ -0.42
CDKN2A-211ENST00000577854 AMOTQ4VCS5 1084 aa12.41□□□□□ -0.42
CDKN2A-211ENST00000577854 SRCAPQ6ZRS2 3230 aa12.41□□□□□ -0.42
CDKN2A-211ENST00000577854 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.41□□□□□ -0.42
CDKN2A-211ENST00000577854 SBF2Q86WG5 1849 aa12.41□□□□□ -0.42
CDKN2A-211ENST00000577854 PHKG2P15735 406 aa12.4□□□□□ -0.42
CDKN2A-211ENST00000577854 KCNQ4P56696 695 aa12.4□□□□□ -0.42
CDKN2A-211ENST00000577854 ANO8Q9HCE9 1232 aaPredicted RBP12.4□□□□□ -0.42
CDKN2A-211ENST00000577854 TMOD3Q9NYL9 352 aa12.4□□□□□ -0.42
CDKN2A-211ENST00000577854 NUDCQ9Y266 331 aa12.4□□□□□ -0.42
CDKN2A-211ENST00000577854 DOT1LQ8TEK3 1739 aa12.4□□□□□ -0.43
CDKN2A-211ENST00000577854 KAT6BQ8WYB5 2073 aa12.39□□□□□ -0.43
CDKN2A-211ENST00000577854 HSP90AB1P08238 724 aaKnown RBP12.39□□□□□ -0.43
CDKN2A-211ENST00000577854 PPP2R1AP30153 589 aa12.39□□□□□ -0.43
CDKN2A-211ENST00000577854 PROM2Q8N271 834 aa12.39□□□□□ -0.43
CDKN2A-211ENST00000577854 CCNL1Q9UK58 526 aaPredicted RBP12.39□□□□□ -0.43
CDKN2A-211ENST00000577854 RREB1Q92766 1687 aa12.38□□□□□ -0.43
CDKN2A-211ENST00000577854 NUP188Q5SRE5 1749 aa12.37□□□□□ -0.43
CDKN2A-211ENST00000577854 SHANK3Q9BYB0 1731 aa12.37□□□□□ -0.43
CDKN2A-211ENST00000577854 U2AF1L5P0DN76 240 aaPredicted RBP12.37□□□□□ -0.43
CDKN2A-211ENST00000577854 CABP4P57796 275 aa12.37□□□□□ -0.43
CDKN2A-211ENST00000577854 U2AF1Q01081 240 aaKnown RBP eCLIP12.37□□□□□ -0.43
CDKN2A-211ENST00000577854 SLC27A3Q5K4L6 730 aa12.37□□□□□ -0.43
CDKN2A-211ENST00000577854 PALLDQ8WX93 1383 aa12.37□□□□□ -0.43
CDKN2A-211ENST00000577854 BTAF1O14981 1849 aa12.37□□□□□ -0.43
CDKN2A-211ENST00000577854 MSH5O43196 834 aa12.36□□□□□ -0.43
CDKN2A-211ENST00000577854 NKX1-1Q15270 411 aaPredicted RBP12.36□□□□□ -0.43
CDKN2A-211ENST00000577854 SLC15A2Q16348 729 aa12.36□□□□□ -0.43
CDKN2A-211ENST00000577854 PIGBQ92521 554 aa12.36□□□□□ -0.43
CDKN2A-211ENST00000577854 SMARCC1Q92922 1105 aaPredicted RBP12.36□□□□□ -0.43
CDKN2A-211ENST00000577854 DCAF5Q96JK2 942 aa12.36□□□□□ -0.43
CDKN2A-211ENST00000577854 LRRC4BQ9NT99 713 aa12.36□□□□□ -0.43
CDKN2A-211ENST00000577854 TFCP2L1Q9NZI6 479 aa12.36□□□□□ -0.43
CDKN2A-211ENST00000577854 PPP1R1BQ9UD71 204 aaPredicted RBP12.36□□□□□ -0.43
CDKN2A-211ENST00000577854 PKD1L3Q7Z443 1732 aa12.36□□□□□ -0.43
CDKN2A-211ENST00000577854 KDRP35968 1356 aa12.35□□□□□ -0.43
CDKN2A-211ENST00000577854 RGPD3A6NKT7 1758 aaPredicted RBP12.35□□□□□ -0.43
CDKN2A-211ENST00000577854 RGPD4Q7Z3J3 1758 aa12.35□□□□□ -0.43
CDKN2A-211ENST00000577854 PLEKHG2Q9H7P9 1386 aa12.34□□□□□ -0.43
CDKN2A-211ENST00000577854 ZBTB7AO95365 584 aa12.34□□□□□ -0.43
CDKN2A-211ENST00000577854 NEFMP07197 916 aa12.34□□□□□ -0.43
CDKN2A-211ENST00000577854 ZNF827Q17R98 1081 aa12.34□□□□□ -0.43
CDKN2A-211ENST00000577854 AKAP4Q5JQC9 854 aa12.34□□□□□ -0.43
CDKN2A-211ENST00000577854 PRKAR2BP31323 418 aa12.33□□□□□ -0.44
CDKN2A-211ENST00000577854 MTHFSDQ2M296 383 aaKnown RBP12.33□□□□□ -0.44
CDKN2A-211ENST00000577854 RBM42Q9BTD8 480 aaKnown RBP12.33□□□□□ -0.44
CDKN2A-211ENST00000577854 SPON1Q9HCB6 807 aa12.33□□□□□ -0.44
CDKN2A-211ENST00000577854 ASAP1Q9ULH1 1129 aa12.33□□□□□ -0.44
CDKN2A-211ENST00000577854 COL3A1P02461 1466 aaPredicted RBP12.33□□□□□ -0.44
CDKN2A-211ENST00000577854 ERVV-2B6SEH9 535 aa12.32□□□□□ -0.44
CDKN2A-211ENST00000577854 RALBP1Q15311 655 aa12.32□□□□□ -0.44
CDKN2A-211ENST00000577854 AK7Q96M32 723 aa12.32□□□□□ -0.44
CDKN2A-211ENST00000577854 ATF5Q9Y2D1 282 aaPredicted RBP12.32□□□□□ -0.44
CDKN2A-211ENST00000577854 LOC102724428A0A0B4J2F2 783 aa12.31□□□□□ -0.44
CDKN2A-211ENST00000577854 SIK1P57059 783 aa12.31□□□□□ -0.44
CDKN2A-211ENST00000577854 NFATC2IPQ8NCF5 419 aa12.31□□□□□ -0.44
CDKN2A-211ENST00000577854 GAS2L2Q8NHY3 880 aa12.31□□□□□ -0.44
CDKN2A-211ENST00000577854 PDGFDQ9GZP0 370 aaPredicted RBP12.31□□□□□ -0.44
CDKN2A-211ENST00000577854 TOGARAM1Q9Y4F4 1720 aa12.31□□□□□ -0.44
CDKN2A-211ENST00000577854 KDM6AO15550 1401 aaPredicted RBP12.3□□□□□ -0.44
CDKN2A-211ENST00000577854 PTCD1O75127 700 aaKnown RBP12.3□□□□□ -0.44
CDKN2A-211ENST00000577854 PHF14O94880 888 aa12.3□□□□□ -0.44
CDKN2A-211ENST00000577854 HMGB2P26583 209 aaKnown RBP12.3□□□□□ -0.44
CDKN2A-211ENST00000577854 ATP6V1AP38606 617 aa12.3□□□□□ -0.44
CDKN2A-211ENST00000577854 ZNF316A6NFI3 1004 aaPredicted RBP12.29□□□□□ -0.44
CDKN2A-211ENST00000577854 RNMTO43148 476 aaKnown RBP12.29□□□□□ -0.44
CDKN2A-211ENST00000577854 AKT1S1Q96B36 256 aa12.29□□□□□ -0.44
CDKN2A-211ENST00000577854 RSPH6AQ9H0K4 717 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms