RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 USP19O94966 1318 aa9.84□□□□□ -0.83
CASC3-205ENST00000577605 CPSF1Q10570 1443 aaKnown RBP9.84□□□□□ -0.83
CASC3-205ENST00000577605 GCP02774 474 aa9.84□□□□□ -0.83
CASC3-205ENST00000577605 CPDO75976 1380 aa9.84□□□□□ -0.83
CASC3-205ENST00000577605 USP47Q96K76 1375 aa9.84□□□□□ -0.83
CASC3-205ENST00000577605 ALS2Q96Q42 1657 aa9.83□□□□□ -0.84
CASC3-205ENST00000577605 TTC21BQ7Z4L5 1316 aa9.83□□□□□ -0.84
CASC3-205ENST00000577605 RGPD8O14715 1765 aaPredicted RBP9.83□□□□□ -0.84
CASC3-205ENST00000577605 SSH2Q76I76 1423 aa9.83□□□□□ -0.84
CASC3-205ENST00000577605 ONECUT3O60422 494 aaPredicted RBP9.83□□□□□ -0.84
CASC3-205ENST00000577605 LCE2DQ5TA82 110 aaPredicted RBP9.83□□□□□ -0.84
CASC3-205ENST00000577605 TMC1Q8TDI8 760 aa9.83□□□□□ -0.84
CASC3-205ENST00000577605 BTG4Q9NY30 223 aa9.83□□□□□ -0.84
CASC3-205ENST00000577605 KTN1Q86UP2 1357 aaKnown RBP9.83□□□□□ -0.84
CASC3-205ENST00000577605 NKX1-1Q15270 411 aaPredicted RBP9.82□□□□□ -0.84
CASC3-205ENST00000577605 CCDC125Q86Z20 511 aa9.82□□□□□ -0.84
CASC3-205ENST00000577605 EVA1CP58658 441 aa9.81□□□□□ -0.84
CASC3-205ENST00000577605 EIF4G2P78344 907 aaKnown RBP eCLIP9.81□□□□□ -0.84
CASC3-205ENST00000577605 SLC12A5Q9H2X9 1139 aa9.81□□□□□ -0.84
CASC3-205ENST00000577605 CCDC9Q9Y3X0 531 aaKnown RBP9.81□□□□□ -0.84
CASC3-205ENST00000577605 USP31Q70CQ4 1352 aa9.8□□□□□ -0.84
CASC3-205ENST00000577605 KIAA0232Q92628 1395 aa9.8□□□□□ -0.84
CASC3-205ENST00000577605 ZC3H6P61129 1189 aaKnown RBP9.8□□□□□ -0.84
CASC3-205ENST00000577605 NUTM2GQ5VZR2 741 aa9.8□□□□□ -0.84
CASC3-205ENST00000577605 THRAP3Q9Y2W1 955 aaKnown RBP9.8□□□□□ -0.84
CASC3-205ENST00000577605 RGS12O14924 1447 aa9.8□□□□□ -0.84
CASC3-205ENST00000577605 EDC4Q6P2E9 1401 aaKnown RBP9.8□□□□□ -0.84
CASC3-205ENST00000577605 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.79□□□□□ -0.84
CASC3-205ENST00000577605 MARF1Q9Y4F3 1742 aaKnown RBP9.79□□□□□ -0.84
CASC3-205ENST00000577605 AATKQ6ZMQ8 1374 aa9.79□□□□□ -0.84
CASC3-205ENST00000577605 COL14A1Q05707 1796 aaKnown RBP9.79□□□□□ -0.84
CASC3-205ENST00000577605 PPP1R37O75864 691 aa9.79□□□□□ -0.84
CASC3-205ENST00000577605 TMEM92Q6UXU6 159 aa9.79□□□□□ -0.84
CASC3-205ENST00000577605 SPATA31A5Q5VU36 1347 aa9.79□□□□□ -0.84
CASC3-205ENST00000577605 SPATA31A7Q8IWB4 1347 aa9.79□□□□□ -0.84
CASC3-205ENST00000577605 NWD2Q9ULI1 1742 aa9.79□□□□□ -0.84
CASC3-205ENST00000577605 C11orf95C9JLR9 678 aaPredicted RBP9.78□□□□□ -0.84
CASC3-205ENST00000577605 UPF1Q92900 1129 aaKnown RBP eCLIP9.78□□□□□ -0.84
CASC3-205ENST00000577605 ANKRD36BQ8N2N9 1353 aa9.77□□□□□ -0.84
CASC3-205ENST00000577605 POTEMA6NI47 508 aa9.77□□□□□ -0.85
CASC3-205ENST00000577605 SNPHO15079 494 aa9.77□□□□□ -0.85
CASC3-205ENST00000577605 BARGINQ6ZT62 677 aa9.77□□□□□ -0.85
CASC3-205ENST00000577605 ARHGEF25Q86VW2 580 aa9.77□□□□□ -0.85
CASC3-205ENST00000577605 SEPT12Q8IYM1 358 aa9.77□□□□□ -0.85
CASC3-205ENST00000577605 SPATA31A1Q5TZJ5 1347 aa9.77□□□□□ -0.85
CASC3-205ENST00000577605 SLIT3O75094 1523 aa9.77□□□□□ -0.85
CASC3-205ENST00000577605 ST18O60284 1047 aa9.76□□□□□ -0.85
CASC3-205ENST00000577605 CHRNA2Q15822 529 aa9.76□□□□□ -0.85
CASC3-205ENST00000577605 POTEGQ6S5H5 508 aa9.76□□□□□ -0.85
CASC3-205ENST00000577605 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.76□□□□□ -0.85
CASC3-205ENST00000577605 CDCA7Q9BWT1 371 aaPredicted RBP9.76□□□□□ -0.85
CASC3-205ENST00000577605 CD163L1Q9NR16 1453 aa9.76□□□□□ -0.85
CASC3-205ENST00000577605 ABCA3Q99758 1704 aa9.76□□□□□ -0.85
CASC3-205ENST00000577605 A0A1W2PP64 1363 aa9.75□□□□□ -0.85
CASC3-205ENST00000577605 KRT27Q7Z3Y8 459 aa9.75□□□□□ -0.85
CASC3-205ENST00000577605 TCP11L2Q8N4U5 519 aa9.75□□□□□ -0.85
CASC3-205ENST00000577605 COG3Q96JB2 828 aa9.75□□□□□ -0.85
CASC3-205ENST00000577605 STRN4Q9NRL3 753 aa9.75□□□□□ -0.85
CASC3-205ENST00000577605 CRYBG1Q9Y4K1 1723 aa9.74□□□□□ -0.85
CASC3-205ENST00000577605 ABCC6O95255 1503 aa9.74□□□□□ -0.85
CASC3-205ENST00000577605 FAM98CQ17RN3 349 aaKnown RBP9.74□□□□□ -0.85
CASC3-205ENST00000577605 NME9Q86XW9 330 aa9.74□□□□□ -0.85
CASC3-205ENST00000577605 NRKQ7Z2Y5 1582 aa9.74□□□□□ -0.85
CASC3-205ENST00000577605 PHRF1Q9P1Y6 1649 aaKnown RBP9.74□□□□□ -0.85
CASC3-205ENST00000577605 PLCH1Q4KWH8 1693 aa9.74□□□□□ -0.85
CASC3-205ENST00000577605 GLI3P10071 1580 aa9.73□□□□□ -0.85
CASC3-205ENST00000577605 A0A0G2JS52 829 aa9.73□□□□□ -0.85
CASC3-205ENST00000577605 MYT1Q01538 1121 aa9.73□□□□□ -0.85
CASC3-205ENST00000577605 SF3B2Q13435 895 aaKnown RBP9.73□□□□□ -0.85
CASC3-205ENST00000577605 WDR17Q8IZU2 1322 aa9.73□□□□□ -0.85
CASC3-205ENST00000577605 CRB1P82279 1406 aa9.73□□□□□ -0.85
CASC3-205ENST00000577605 HSPA5P11021 654 aaKnown RBP9.72□□□□□ -0.85
CASC3-205ENST00000577605 LARP1Q6PKG0 1096 aaKnown RBP9.72□□□□□ -0.85
CASC3-205ENST00000577605 TOM1L2Q6ZVM7 507 aa9.72□□□□□ -0.85
CASC3-205ENST00000577605 CARD10Q9BWT7 1032 aa9.72□□□□□ -0.85
CASC3-205ENST00000577605 AKAP12Q02952 1782 aa9.72□□□□□ -0.85
CASC3-205ENST00000577605 COL5A2P05997 1499 aaPredicted RBP9.72□□□□□ -0.85
CASC3-205ENST00000577605 PIK3C2AO00443 1686 aa9.71□□□□□ -0.85
CASC3-205ENST00000577605 CAMTA1Q9Y6Y1 1673 aa9.71□□□□□ -0.85
CASC3-205ENST00000577605 ZBTB7CA1YPR0 619 aa9.71□□□□□ -0.86
CASC3-205ENST00000577605 FYB1O15117 783 aa9.71□□□□□ -0.86
CASC3-205ENST00000577605 CSB-PGBD3P0DP91 1061 aa9.71□□□□□ -0.86
CASC3-205ENST00000577605 HOXB3P14651 431 aaPredicted RBP9.71□□□□□ -0.86
CASC3-205ENST00000577605 PDE3BQ13370 1112 aa9.71□□□□□ -0.86
CASC3-205ENST00000577605 FAM196AQ6ZSG2 479 aa9.71□□□□□ -0.86
CASC3-205ENST00000577605 RYDENQ9NUL5 291 aaKnown RBP9.71□□□□□ -0.86
CASC3-205ENST00000577605 OVOS2A0A0J9YW53 1432 aa9.71□□□□□ -0.86
CASC3-205ENST00000577605 BLMP54132 1417 aaPredicted RBP9.71□□□□□ -0.86
CASC3-205ENST00000577605 OVOS2Q6IE36 1432 aa9.71□□□□□ -0.86
CASC3-205ENST00000577605 MON2Q7Z3U7 1717 aa9.7□□□□□ -0.86
CASC3-205ENST00000577605 NRAPQ86VF7 1730 aa9.7□□□□□ -0.86
CASC3-205ENST00000577605 IP6K1Q92551 441 aa9.7□□□□□ -0.86
CASC3-205ENST00000577605 PODXL2Q9NZ53 605 aa9.7□□□□□ -0.86
CASC3-205ENST00000577605 AXIN2Q9Y2T1 843 aa9.7□□□□□ -0.86
CASC3-205ENST00000577605 CGNL1Q0VF96 1302 aa9.7□□□□□ -0.86
CASC3-205ENST00000577605 KIF24Q5T7B8 1368 aa9.7□□□□□ -0.86
CASC3-205ENST00000577605 CCDC7Q96M83 1385 aa9.7□□□□□ -0.86
CASC3-205ENST00000577605 LMO7Q8WWI1 1683 aa9.7□□□□□ -0.86
CASC3-205ENST00000577605 NFAT5O94916 1531 aa9.69□□□□□ -0.86
CASC3-205ENST00000577605 USP54Q70EL1 1684 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms