RNA–Protein interactions for RNA: ENST00000577497.5

CUEDC1-204, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-204ENST00000577497 DOT1LQ8TEK3 1739 aa18.8■□□□□ 0.6
CUEDC1-204ENST00000577497 CGNL1Q0VF96 1302 aa18.8■□□□□ 0.6
CUEDC1-204ENST00000577497 KIF24Q5T7B8 1368 aa18.8■□□□□ 0.6
CUEDC1-204ENST00000577497 PAPPAQ13219 1627 aa18.78■□□□□ 0.6
CUEDC1-204ENST00000577497 PPM1GO15355 546 aaPredicted RBP18.78■□□□□ 0.6
CUEDC1-204ENST00000577497 ZCRB1Q8TBF4 217 aaKnown RBP18.78■□□□□ 0.6
CUEDC1-204ENST00000577497 PANK3Q9H999 370 aa18.77■□□□□ 0.6
CUEDC1-204ENST00000577497 NSD2O96028 1365 aa18.77■□□□□ 0.6
CUEDC1-204ENST00000577497 MAP2P11137 1827 aaKnown RBP18.76■□□□□ 0.59
CUEDC1-204ENST00000577497 TNNT2P45379 298 aaPredicted RBP18.75■□□□□ 0.59
CUEDC1-204ENST00000577497 RAPGEF4Q8WZA2 1011 aa18.75■□□□□ 0.59
CUEDC1-204ENST00000577497 POLKQ9UBT6 870 aa18.75■□□□□ 0.59
CUEDC1-204ENST00000577497 NCAPD2Q15021 1401 aa18.74■□□□□ 0.59
CUEDC1-204ENST00000577497 PRIM1P49642 420 aaKnown RBP18.74■□□□□ 0.59
CUEDC1-204ENST00000577497 SYTL4Q96C24 671 aaPredicted RBP18.74■□□□□ 0.59
CUEDC1-204ENST00000577497 LRRC4BQ9NT99 713 aa18.74■□□□□ 0.59
CUEDC1-204ENST00000577497 WASHC2AQ641Q2 1341 aa18.74■□□□□ 0.59
CUEDC1-204ENST00000577497 SLC15A2Q16348 729 aa18.73■□□□□ 0.59
CUEDC1-204ENST00000577497 STK32BQ9NY57 414 aa18.73■□□□□ 0.59
CUEDC1-204ENST00000577497 KAT6BQ8WYB5 2073 aa18.73■□□□□ 0.59
CUEDC1-204ENST00000577497 TATP17735 454 aaPredicted RBP18.72■□□□□ 0.59
CUEDC1-204ENST00000577497 SPON1Q9HCB6 807 aa18.72■□□□□ 0.59
CUEDC1-204ENST00000577497 PKD1L3Q7Z443 1732 aa18.71■□□□□ 0.59
CUEDC1-204ENST00000577497 ZBTB7AO95365 584 aa18.71■□□□□ 0.59
CUEDC1-204ENST00000577497 KCNQ4P56696 695 aa18.71■□□□□ 0.59
CUEDC1-204ENST00000577497 ZNF827Q17R98 1081 aa18.71■□□□□ 0.59
CUEDC1-204ENST00000577497 EYA1Q99502 592 aa18.7■□□□□ 0.58
CUEDC1-204ENST00000577497 TOGARAM1Q9Y4F4 1720 aa18.7■□□□□ 0.58
CUEDC1-204ENST00000577497 KIF7Q2M1P5 1343 aa18.7■□□□□ 0.58
CUEDC1-204ENST00000577497 PCDH11XQ9BZA7 1347 aa18.7■□□□□ 0.58
CUEDC1-204ENST00000577497 PCDH11YQ9BZA8 1340 aa18.7■□□□□ 0.58
CUEDC1-204ENST00000577497 LY75O60449 1722 aa18.69■□□□□ 0.58
CUEDC1-204ENST00000577497 CYP27B1O15528 508 aa18.69■□□□□ 0.58
CUEDC1-204ENST00000577497 EIF4A2Q14240 407 aaKnown RBP18.68■□□□□ 0.58
CUEDC1-204ENST00000577497 PTGER2P43116 358 aa18.66■□□□□ 0.58
CUEDC1-204ENST00000577497 PPP1R1BQ9UD71 204 aaPredicted RBP18.66■□□□□ 0.58
CUEDC1-204ENST00000577497 ATF5Q9Y2D1 282 aaPredicted RBP18.66■□□□□ 0.58
CUEDC1-204ENST00000577497 AKT1S1Q96B36 256 aa18.65■□□□□ 0.58
CUEDC1-204ENST00000577497 TUBGCP6Q96RT7 1819 aa18.65■□□□□ 0.58
CUEDC1-204ENST00000577497 SLC27A3Q5K4L6 730 aa18.64■□□□□ 0.57
CUEDC1-204ENST00000577497 MORC1Q86VD1 984 aa18.63■□□□□ 0.57
CUEDC1-204ENST00000577497 AMER1Q5JTC6 1135 aaPredicted RBP18.62■□□□□ 0.57
CUEDC1-204ENST00000577497 KNSTRNQ9Y448 316 aa18.62■□□□□ 0.57
CUEDC1-204ENST00000577497 IGSF1Q8N6C5 1336 aa18.62■□□□□ 0.57
CUEDC1-204ENST00000577497 ITGB4P16144 1822 aa18.62■□□□□ 0.57
CUEDC1-204ENST00000577497 QSER1Q2KHR3 1735 aa18.61■□□□□ 0.57
CUEDC1-204ENST00000577497 MPRIPQ6WCQ1 1025 aa18.61■□□□□ 0.57
CUEDC1-204ENST00000577497 SGIP1Q9BQI5 828 aa18.61■□□□□ 0.57
CUEDC1-204ENST00000577497 MTFR1LQ9H019 292 aa18.61■□□□□ 0.57
CUEDC1-204ENST00000577497 CCNL1Q9UK58 526 aaPredicted RBP18.61■□□□□ 0.57
CUEDC1-204ENST00000577497 PNPLA7Q6ZV29 1317 aa18.6■□□□□ 0.57
CUEDC1-204ENST00000577497 SPG7Q9UQ90 795 aa18.6■□□□□ 0.57
CUEDC1-204ENST00000577497 PALLDQ8WX93 1383 aa18.59■□□□□ 0.57
CUEDC1-204ENST00000577497 NKX1-1Q15270 411 aaPredicted RBP18.59■□□□□ 0.57
CUEDC1-204ENST00000577497 C5P01031 1676 aa18.58■□□□□ 0.57
CUEDC1-204ENST00000577497 PER1O15534 1290 aaPredicted RBP18.57■□□□□ 0.56
CUEDC1-204ENST00000577497 PHKG2P15735 406 aa18.57■□□□□ 0.56
CUEDC1-204ENST00000577497 AEBP1Q8IUX7 1158 aa18.57■□□□□ 0.56
CUEDC1-204ENST00000577497 PIGBQ92521 554 aa18.57■□□□□ 0.56
CUEDC1-204ENST00000577497 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.57■□□□□ 0.56
CUEDC1-204ENST00000577497 TFCP2L1Q9NZI6 479 aa18.57■□□□□ 0.56
CUEDC1-204ENST00000577497 IFNL2Q8IZJ0 200 aa18.55■□□□□ 0.56
CUEDC1-204ENST00000577497 TAF1LQ8IZX4 1826 aa18.55■□□□□ 0.56
CUEDC1-204ENST00000577497 FHDC1Q9C0D6 1143 aaPredicted RBP18.54■□□□□ 0.56
CUEDC1-204ENST00000577497 COL24A1Q17RW2 1714 aa18.53■□□□□ 0.56
CUEDC1-204ENST00000577497 CC2D1BQ5T0F9 858 aaKnown RBP18.53■□□□□ 0.56
CUEDC1-204ENST00000577497 PLEKHG2Q9H7P9 1386 aa18.53■□□□□ 0.56
CUEDC1-204ENST00000577497 IL13P35225 146 aa18.52■□□□□ 0.56
CUEDC1-204ENST00000577497 C4BP0C0L5 1744 aa18.52■□□□□ 0.55
CUEDC1-204ENST00000577497 KDM6AO15550 1401 aaPredicted RBP18.51■□□□□ 0.55
CUEDC1-204ENST00000577497 AMIGO3Q86WK7 504 aa18.51■□□□□ 0.55
CUEDC1-204ENST00000577497 COL23A1Q86Y22 540 aaPredicted RBP18.51■□□□□ 0.55
CUEDC1-204ENST00000577497 ARXQ96QS3 562 aa18.51■□□□□ 0.55
CUEDC1-204ENST00000577497 SYT17Q9BSW7 474 aa18.51■□□□□ 0.55
CUEDC1-204ENST00000577497 TMOD3Q9NYL9 352 aa18.51■□□□□ 0.55
CUEDC1-204ENST00000577497 ASAP1Q9ULH1 1129 aa18.51■□□□□ 0.55
CUEDC1-204ENST00000577497 UTRNP46939 3433 aa18.51■□□□□ 0.55
CUEDC1-204ENST00000577497 MTHFSP49914 203 aa18.5■□□□□ 0.55
CUEDC1-204ENST00000577497 SULT6B1Q6IMI4 303 aa18.5■□□□□ 0.55
CUEDC1-204ENST00000577497 SMARCC1Q92922 1105 aaPredicted RBP18.5■□□□□ 0.55
CUEDC1-204ENST00000577497 KDRP35968 1356 aa18.5■□□□□ 0.55
CUEDC1-204ENST00000577497 CNGB1Q14028 1251 aaPredicted RBP18.49■□□□□ 0.55
CUEDC1-204ENST00000577497 SMIM5Q71RC9 77 aa18.49■□□□□ 0.55
CUEDC1-204ENST00000577497 SLC16A10Q8TF71 515 aa18.49■□□□□ 0.55
CUEDC1-204ENST00000577497 PLEKHO1Q53GL0 409 aaPredicted RBP18.48■□□□□ 0.55
CUEDC1-204ENST00000577497 ZNF530Q6P9A1 599 aaPredicted RBP18.48■□□□□ 0.55
CUEDC1-204ENST00000577497 ATG3Q9NT62 314 aa18.48■□□□□ 0.55
CUEDC1-204ENST00000577497 LOC102724428A0A0B4J2F2 783 aa18.47■□□□□ 0.55
CUEDC1-204ENST00000577497 MSH5O43196 834 aa18.47■□□□□ 0.55
CUEDC1-204ENST00000577497 SIK1P57059 783 aa18.47■□□□□ 0.55
CUEDC1-204ENST00000577497 LINC00116Q8NCU8 138 aa18.47■□□□□ 0.55
CUEDC1-204ENST00000577497 UBR3Q6ZT12 1888 aa18.46■□□□□ 0.55
CUEDC1-204ENST00000577497 ITPK1Q13572 414 aa18.46■□□□□ 0.55
CUEDC1-204ENST00000577497 MSL1Q68DK7 614 aa18.46■□□□□ 0.55
CUEDC1-204ENST00000577497 DCAF5Q96JK2 942 aa18.46■□□□□ 0.55
CUEDC1-204ENST00000577497 MAP3K5Q99683 1374 aa18.45■□□□□ 0.54
CUEDC1-204ENST00000577497 AMOTQ4VCS5 1084 aa18.45■□□□□ 0.54
CUEDC1-204ENST00000577497 COL3A1P02461 1466 aaPredicted RBP18.45■□□□□ 0.54
CUEDC1-204ENST00000577497 NPC1L1Q9UHC9 1359 aa18.44■□□□□ 0.54
CUEDC1-204ENST00000577497 ERVV-2B6SEH9 535 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms