RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 LMAN1P49257 510 aa10.33□□□□□ -0.76
CDH8-203ENST00000577390 TTC31Q49AM3 519 aaPredicted RBP10.33□□□□□ -0.76
CDH8-203ENST00000577390 CFAP58Q5T655 872 aa10.33□□□□□ -0.76
CDH8-203ENST00000577390 IVLP07476 585 aa10.33□□□□□ -0.76
CDH8-203ENST00000577390 GTF2F1P35269 517 aaKnown RBP eCLIP10.33□□□□□ -0.76
CDH8-203ENST00000577390 RIC3Q7Z5B4 369 aa10.33□□□□□ -0.76
CDH8-203ENST00000577390 STIM1Q13586 685 aa10.33□□□□□ -0.76
CDH8-203ENST00000577390 FMN1Q68DA7 1419 aa10.33□□□□□ -0.76
CDH8-203ENST00000577390 GSTTP1A0A1W2PQM5 241 aa10.33□□□□□ -0.76
CDH8-203ENST00000577390 CLEC11AQ9Y240 323 aa10.33□□□□□ -0.76
CDH8-203ENST00000577390 ANKRD30AQ9BXX3 1397 aa10.33□□□□□ -0.76
CDH8-203ENST00000577390 ELL2O00472 640 aaPredicted RBP10.33□□□□□ -0.76
CDH8-203ENST00000577390 NDC80O14777 642 aa10.33□□□□□ -0.76
CDH8-203ENST00000577390 PAIP2Q9BPZ3 127 aaKnown RBP10.33□□□□□ -0.76
CDH8-203ENST00000577390 SDF4Q9BRK5 362 aa10.33□□□□□ -0.76
CDH8-203ENST00000577390 EFCC1Q9HA90 598 aa10.33□□□□□ -0.76
CDH8-203ENST00000577390 STRN4Q9NRL3 753 aa10.33□□□□□ -0.76
CDH8-203ENST00000577390 SMC2O95347 1197 aa10.33□□□□□ -0.76
CDH8-203ENST00000577390 JAKMIP3Q5VZ66 844 aa10.33□□□□□ -0.76
CDH8-203ENST00000577390 ZBTB24O43167 697 aaPredicted RBP10.32□□□□□ -0.76
CDH8-203ENST00000577390 ATXN8OSP0DMR3 200 aa10.32□□□□□ -0.76
CDH8-203ENST00000577390 PSMC4P43686 418 aa10.32□□□□□ -0.76
CDH8-203ENST00000577390 LRCH2Q5VUJ6 765 aa10.32□□□□□ -0.76
CDH8-203ENST00000577390 GNL3LQ9NVN8 582 aaKnown RBP10.32□□□□□ -0.76
CDH8-203ENST00000577390 KIF2AO00139 706 aaPredicted RBP10.32□□□□□ -0.76
CDH8-203ENST00000577390 RIOK3O14730 519 aaKnown RBP10.32□□□□□ -0.76
CDH8-203ENST00000577390 RNF214Q8ND24 703 aa10.32□□□□□ -0.76
CDH8-203ENST00000577390 RBM42Q9BTD8 480 aaKnown RBP10.32□□□□□ -0.76
CDH8-203ENST00000577390 FSD2A1L4K1 749 aa10.31□□□□□ -0.76
CDH8-203ENST00000577390 PRDM4Q9UKN5 801 aa10.31□□□□□ -0.76
CDH8-203ENST00000577390 A0A1B0GUL7 405 aa10.31□□□□□ -0.76
CDH8-203ENST00000577390 FMNL2Q96PY5 1086 aa10.31□□□□□ -0.76
CDH8-203ENST00000577390 TCHPQ9BT92 498 aa10.31□□□□□ -0.76
CDH8-203ENST00000577390 FERMT1Q9BQL6 677 aa10.31□□□□□ -0.76
CDH8-203ENST00000577390 GEMIN8Q9NWZ8 242 aaKnown RBP10.31□□□□□ -0.76
CDH8-203ENST00000577390 TRMT1LQ7Z2T5 733 aaKnown RBP10.31□□□□□ -0.76
CDH8-203ENST00000577390 CCP110O43303 1012 aa10.31□□□□□ -0.76
CDH8-203ENST00000577390 GOPCQ9HD26 462 aa10.31□□□□□ -0.76
CDH8-203ENST00000577390 WIZO95785 1651 aa10.31□□□□□ -0.76
CDH8-203ENST00000577390 ERLIN1O75477 346 aa10.3□□□□□ -0.76
CDH8-203ENST00000577390 SIRT1Q96EB6 747 aa10.3□□□□□ -0.76
CDH8-203ENST00000577390 CNNM1Q9NRU3 951 aa10.3□□□□□ -0.76
CDH8-203ENST00000577390 MNAT1P51948 309 aa10.3□□□□□ -0.76
CDH8-203ENST00000577390 LRRC45Q96CN5 670 aa10.3□□□□□ -0.76
CDH8-203ENST00000577390 SETSIPP0DME0 302 aa10.3□□□□□ -0.76
CDH8-203ENST00000577390 CEP135Q66GS9 1140 aa10.3□□□□□ -0.76
CDH8-203ENST00000577390 PPP1R12BO60237 982 aaPredicted RBP10.29□□□□□ -0.76
CDH8-203ENST00000577390 BMP2KQ9NSY1 1161 aaPredicted RBP10.29□□□□□ -0.76
CDH8-203ENST00000577390 RAPGEF4Q8WZA2 1011 aa10.29□□□□□ -0.76
CDH8-203ENST00000577390 PPP4R4Q6NUP7 873 aa10.29□□□□□ -0.76
CDH8-203ENST00000577390 TICAM2Q86XR7 235 aa10.29□□□□□ -0.76
CDH8-203ENST00000577390 RSPH3Q86UC2 560 aa10.29□□□□□ -0.76
CDH8-203ENST00000577390 CCDC117Q8IWD4 279 aaPredicted RBP10.29□□□□□ -0.76
CDH8-203ENST00000577390 KIF1CO43896 1103 aaKnown RBP10.29□□□□□ -0.76
CDH8-203ENST00000577390 CEP120Q8N960 986 aa10.29□□□□□ -0.76
CDH8-203ENST00000577390 ZNF500O60304 480 aaPredicted RBP10.29□□□□□ -0.76
CDH8-203ENST00000577390 ATP2C2O75185 946 aa10.29□□□□□ -0.76
CDH8-203ENST00000577390 ERCC5P28715 1186 aaPredicted RBP10.28□□□□□ -0.76
CDH8-203ENST00000577390 SMC3Q9UQE7 1217 aa10.28□□□□□ -0.76
CDH8-203ENST00000577390 DNAAF4Q8WXU2 420 aa10.28□□□□□ -0.76
CDH8-203ENST00000577390 HAUS7Q99871 368 aa10.28□□□□□ -0.76
CDH8-203ENST00000577390 LARP1Q6PKG0 1096 aaKnown RBP10.28□□□□□ -0.76
CDH8-203ENST00000577390 CPSF2Q9P2I0 782 aaKnown RBP10.28□□□□□ -0.76
CDH8-203ENST00000577390 SETD1BQ9UPS6 1966 aaKnown RBP10.28□□□□□ -0.76
CDH8-203ENST00000577390 SNX16P57768 344 aa10.28□□□□□ -0.76
CDH8-203ENST00000577390 KLHL40Q2TBA0 621 aa10.27□□□□□ -0.76
CDH8-203ENST00000577390 PAXBP1Q9Y5B6 917 aa10.27□□□□□ -0.76
CDH8-203ENST00000577390 ACRBPQ8NEB7 543 aa10.27□□□□□ -0.76
CDH8-203ENST00000577390 KIF21AQ7Z4S6 1674 aa10.27□□□□□ -0.76
CDH8-203ENST00000577390 IRX5P78411 483 aaPredicted RBP10.27□□□□□ -0.77
CDH8-203ENST00000577390 SMC1BQ8NDV3 1235 aa10.27□□□□□ -0.77
CDH8-203ENST00000577390 TBC1D2Q9BYX2 928 aa10.27□□□□□ -0.77
CDH8-203ENST00000577390 PRC1O43663 620 aa10.27□□□□□ -0.77
CDH8-203ENST00000577390 CERS3Q8IU89 383 aa10.27□□□□□ -0.77
CDH8-203ENST00000577390 GOLGA6L9A6NEM1 432 aa10.27□□□□□ -0.77
CDH8-203ENST00000577390 DZIP1LQ8IYY4 767 aaKnown RBP10.27□□□□□ -0.77
CDH8-203ENST00000577390 PPP1R14CQ8TAE6 165 aa10.27□□□□□ -0.77
CDH8-203ENST00000577390 YY1AP1Q9H869 796 aa10.27□□□□□ -0.77
CDH8-203ENST00000577390 V9GYY5 206 aaPredicted RBP10.27□□□□□ -0.77
CDH8-203ENST00000577390 TNPO1Q92973 898 aaKnown RBP10.27□□□□□ -0.77
CDH8-203ENST00000577390 COG3Q96JB2 828 aa10.27□□□□□ -0.77
CDH8-203ENST00000577390 MAP2K2P36507 400 aa10.26□□□□□ -0.77
CDH8-203ENST00000577390 ATP2B3Q16720 1220 aa10.26□□□□□ -0.77
CDH8-203ENST00000577390 PUF60Q9UHX1 559 aaKnown RBP10.26□□□□□ -0.77
CDH8-203ENST00000577390 SYCE3A1L190 88 aa10.26□□□□□ -0.77
CDH8-203ENST00000577390 DHX8Q14562 1220 aaKnown RBP10.26□□□□□ -0.77
CDH8-203ENST00000577390 TPD52P55327 224 aaPredicted RBP10.26□□□□□ -0.77
CDH8-203ENST00000577390 FAM177A1Q8N128 213 aaPredicted RBP10.26□□□□□ -0.77
CDH8-203ENST00000577390 UBA5Q9GZZ9 404 aa10.26□□□□□ -0.77
CDH8-203ENST00000577390 NLRP2Q9NX02 1062 aa10.26□□□□□ -0.77
CDH8-203ENST00000577390 USP47Q96K76 1375 aa10.26□□□□□ -0.77
CDH8-203ENST00000577390 MAPKBP1O60336 1514 aa10.26□□□□□ -0.77
CDH8-203ENST00000577390 OPA1O60313 960 aa10.26□□□□□ -0.77
CDH8-203ENST00000577390 CCDC172P0C7W6 258 aa10.26□□□□□ -0.77
CDH8-203ENST00000577390 CUL4BQ13620 913 aa10.26□□□□□ -0.77
CDH8-203ENST00000577390 KMT5BQ4FZB7 885 aa10.26□□□□□ -0.77
CDH8-203ENST00000577390 CRACR2BQ8N4Y2 399 aaPredicted RBP10.26□□□□□ -0.77
CDH8-203ENST00000577390 PFDN4Q9NQP4 134 aa10.26□□□□□ -0.77
CDH8-203ENST00000577390 TMCO4Q5TGY1 634 aa10.25□□□□□ -0.77
CDH8-203ENST00000577390 SREK1Q8WXA9 508 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms