RNA–Protein interactions for RNA: ENST00000577198.5

KRT18P55-201, Transcript of keratin 18 pseudogene 55, humanhuman

TSL 1 (best) BASIC

Gene KRT18P55, Length 1,950 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P55-201ENST00000577198 LRRC37A3O60309 1634 aa27.21■■□□□ 1.95
KRT18P55-201ENST00000577198 IPO8O15397 1037 aaKnown RBP27.2■■□□□ 1.95
KRT18P55-201ENST00000577198 KRT24Q2M2I5 525 aa27.2■■□□□ 1.95
KRT18P55-201ENST00000577198 GAS2L2Q8NHY3 880 aa27.2■■□□□ 1.95
KRT18P55-201ENST00000577198 ATF3P18847 181 aa27.2■■□□□ 1.94
KRT18P55-201ENST00000577198 PDE4AP27815 886 aa27.2■■□□□ 1.94
KRT18P55-201ENST00000577198 ARHGEF25Q86VW2 580 aa27.2■■□□□ 1.94
KRT18P55-201ENST00000577198 USHBP1Q8N6Y0 703 aa27.2■■□□□ 1.94
KRT18P55-201ENST00000577198 NBPF6Q5VWK0 638 aa27.18■■□□□ 1.94
KRT18P55-201ENST00000577198 NBPF4Q96M43 638 aa27.18■■□□□ 1.94
KRT18P55-201ENST00000577198 BACH2Q9BYV9 841 aa27.18■■□□□ 1.94
KRT18P55-201ENST00000577198 MSH6P52701 1360 aa27.18■■□□□ 1.94
KRT18P55-201ENST00000577198 ITPRIPQ8IWB1 547 aa27.17■■□□□ 1.94
KRT18P55-201ENST00000577198 ARHGAP45Q92619 1136 aa27.17■■□□□ 1.94
KRT18P55-201ENST00000577198 DDX17Q92841 729 aaKnown RBP27.17■■□□□ 1.94
KRT18P55-201ENST00000577198 DDX19BQ9UMR2 479 aa27.17■■□□□ 1.94
KRT18P55-201ENST00000577198 MED1Q15648 1581 aaPredicted RBP27.16■■□□□ 1.94
KRT18P55-201ENST00000577198 KIAA0232Q92628 1395 aa27.16■■□□□ 1.94
KRT18P55-201ENST00000577198 LMOD2Q6P5Q4 547 aa27.15■■□□□ 1.94
KRT18P55-201ENST00000577198 MIS18AQ9NYP9 233 aa27.15■■□□□ 1.94
KRT18P55-201ENST00000577198 RTF1Q92541 710 aaKnown RBP27.15■■□□□ 1.94
KRT18P55-201ENST00000577198 ZBTB7CA1YPR0 619 aa27.14■■□□□ 1.94
KRT18P55-201ENST00000577198 HTATSF1O43719 755 aaKnown RBP27.14■■□□□ 1.94
KRT18P55-201ENST00000577198 MSH5O43196 834 aa27.13■■□□□ 1.93
KRT18P55-201ENST00000577198 PLEKHG5O94827 1062 aa27.13■■□□□ 1.93
KRT18P55-201ENST00000577198 ZBTB40Q9NUA8 1239 aa27.13■■□□□ 1.93
KRT18P55-201ENST00000577198 GNAT3A8MTJ3 354 aa27.12■■□□□ 1.93
KRT18P55-201ENST00000577198 LRRC59Q96AG4 307 aaKnown RBP27.12■■□□□ 1.93
KRT18P55-201ENST00000577198 CADPS2Q86UW7 1296 aa27.11■■□□□ 1.93
KRT18P55-201ENST00000577198 RGPD5Q99666 1765 aa27.11■■□□□ 1.93
KRT18P55-201ENST00000577198 RGS3P49796 1198 aa27.11■■□□□ 1.93
KRT18P55-201ENST00000577198 NCAPD2Q15021 1401 aa27.11■■□□□ 1.93
KRT18P55-201ENST00000577198 IL17REQ8NFR9 667 aa27.11■■□□□ 1.93
KRT18P55-201ENST00000577198 MAP3K5Q99683 1374 aa27.11■■□□□ 1.93
KRT18P55-201ENST00000577198 ABCC4O15439 1325 aa27.1■■□□□ 1.93
KRT18P55-201ENST00000577198 AXIN2Q9Y2T1 843 aa27.1■■□□□ 1.93
KRT18P55-201ENST00000577198 CAMTA1Q9Y6Y1 1673 aa27.09■■□□□ 1.93
KRT18P55-201ENST00000577198 TSPYL4Q9UJ04 414 aa27.08■■□□□ 1.93
KRT18P55-201ENST00000577198 RWDD1Q9H446 243 aaPredicted RBP27.08■■□□□ 1.92
KRT18P55-201ENST00000577198 PXDNQ92626 1479 aa27.06■■□□□ 1.92
KRT18P55-201ENST00000577198 RGS12O14924 1447 aa27.05■■□□□ 1.92
KRT18P55-201ENST00000577198 ZBTB7BO15156 539 aaPredicted RBP27.05■■□□□ 1.92
KRT18P55-201ENST00000577198 HDAC1Q13547 482 aaPredicted RBP27.05■■□□□ 1.92
KRT18P55-201ENST00000577198 ANKRD24Q8TF21 1146 aa27.04■■□□□ 1.92
KRT18P55-201ENST00000577198 CRYBG1Q9Y4K1 1723 aa27.03■■□□□ 1.92
KRT18P55-201ENST00000577198 C8orf34Q49A92 452 aa27.03■■□□□ 1.92
KRT18P55-201ENST00000577198 NPHP3Q7Z494 1330 aa27.03■■□□□ 1.92
KRT18P55-201ENST00000577198 PDZRN3Q9UPQ7 1066 aa27.02■■□□□ 1.92
KRT18P55-201ENST00000577198 ZNF335Q9H4Z2 1342 aaPredicted RBP27.02■■□□□ 1.92
KRT18P55-201ENST00000577198 CEMIPQ8WUJ3 1361 aa27.02■■□□□ 1.92
KRT18P55-201ENST00000577198 LMO7Q8WWI1 1683 aa27.02■■□□□ 1.92
KRT18P55-201ENST00000577198 HAP1P54257 671 aaPredicted RBP27.02■■□□□ 1.92
KRT18P55-201ENST00000577198 ZC3H6P61129 1189 aaKnown RBP27.02■■□□□ 1.92
KRT18P55-201ENST00000577198 API5Q9BZZ5 524 aaKnown RBP27.02■■□□□ 1.92
KRT18P55-201ENST00000577198 COL18A1P39060 1754 aa27.02■■□□□ 1.92
KRT18P55-201ENST00000577198 TNS3Q68CZ2 1445 aa27.02■■□□□ 1.92
KRT18P55-201ENST00000577198 FAM161AQ3B820 660 aa26.98■■□□□ 1.91
KRT18P55-201ENST00000577198 BRINP3Q76B58 766 aa26.98■■□□□ 1.91
KRT18P55-201ENST00000577198 ERBB3P21860 1342 aa26.98■■□□□ 1.91
KRT18P55-201ENST00000577198 TAF7Q15545 349 aaPredicted RBP26.98■■□□□ 1.91
KRT18P55-201ENST00000577198 SPATA31A3Q5VYP0 1347 aa26.97■■□□□ 1.91
KRT18P55-201ENST00000577198 CABLES1Q8TDN4 633 aa26.97■■□□□ 1.91
KRT18P55-201ENST00000577198 LGR6Q9HBX8 967 aa26.97■■□□□ 1.91
KRT18P55-201ENST00000577198 VIRMAQ69YN4 1812 aaKnown RBP26.97■■□□□ 1.91
KRT18P55-201ENST00000577198 BABAM1Q9NWV8 329 aa26.97■■□□□ 1.91
KRT18P55-201ENST00000577198 SMC5Q8IY18 1101 aa26.95■■□□□ 1.91
KRT18P55-201ENST00000577198 FAM208AQ9UK61 1670 aaKnown RBP26.95■■□□□ 1.9
KRT18P55-201ENST00000577198 SLC4A2P04920 1241 aa26.95■■□□□ 1.9
KRT18P55-201ENST00000577198 INTS3Q68E01 1043 aaKnown RBP26.94■■□□□ 1.9
KRT18P55-201ENST00000577198 G2E3Q7L622 706 aa26.93■■□□□ 1.9
KRT18P55-201ENST00000577198 C1orf115Q9H7X2 142 aa26.93■■□□□ 1.9
KRT18P55-201ENST00000577198 PTPRCP08575 1304 aa26.93■■□□□ 1.9
KRT18P55-201ENST00000577198 KDM3BQ7LBC6 1761 aa26.93■■□□□ 1.9
KRT18P55-201ENST00000577198 PLEKHO1Q53GL0 409 aaPredicted RBP26.93■■□□□ 1.9
KRT18P55-201ENST00000577198 AKAP4Q5JQC9 854 aa26.93■■□□□ 1.9
KRT18P55-201ENST00000577198 ZNF530Q6P9A1 599 aaPredicted RBP26.93■■□□□ 1.9
KRT18P55-201ENST00000577198 ANP32AP39687 249 aaKnown RBP26.91■■□□□ 1.9
KRT18P55-201ENST00000577198 AMOTQ4VCS5 1084 aa26.91■■□□□ 1.9
KRT18P55-201ENST00000577198 SIRT2Q8IXJ6 389 aa26.9■■□□□ 1.9
KRT18P55-201ENST00000577198 CHMP4BQ9H444 224 aaKnown RBP26.9■■□□□ 1.9
KRT18P55-201ENST00000577198 CACNA1FO60840 1977 aa26.89■■□□□ 1.9
KRT18P55-201ENST00000577198 NPM2Q86SE8 214 aaKnown RBP26.89■■□□□ 1.89
KRT18P55-201ENST00000577198 SLAIN2Q9P270 581 aa26.89■■□□□ 1.89
KRT18P55-201ENST00000577198 MPRIPQ6WCQ1 1025 aa26.88■■□□□ 1.89
KRT18P55-201ENST00000577198 ABCC6O95255 1503 aa26.87■■□□□ 1.89
KRT18P55-201ENST00000577198 ADAMTS7Q9UKP4 1686 aa26.87■■□□□ 1.89
KRT18P55-201ENST00000577198 IPO9Q96P70 1041 aaKnown RBP26.86■■□□□ 1.89
KRT18P55-201ENST00000577198 SOS1Q07889 1333 aaPredicted RBP26.86■■□□□ 1.89
KRT18P55-201ENST00000577198 CHRNA2Q15822 529 aa26.86■■□□□ 1.89
KRT18P55-201ENST00000577198 SOS2Q07890 1332 aaPredicted RBP26.85■■□□□ 1.89
KRT18P55-201ENST00000577198 CPDO75976 1380 aa26.85■■□□□ 1.89
KRT18P55-201ENST00000577198 RNMTO43148 476 aaKnown RBP26.85■■□□□ 1.89
KRT18P55-201ENST00000577198 SIPA1L3O60292 1781 aaPredicted RBP26.84■■□□□ 1.89
KRT18P55-201ENST00000577198 KCNQ3O43525 872 aa26.84■■□□□ 1.89
KRT18P55-201ENST00000577198 EIF4A1P60842 406 aaKnown RBP26.84■■□□□ 1.89
KRT18P55-201ENST00000577198 CCDC30Q5VVM6 783 aa26.84■■□□□ 1.89
KRT18P55-201ENST00000577198 OVOS2A0A0G2JMS6 1433 aa26.84■■□□□ 1.89
KRT18P55-201ENST00000577198 NECTIN2Q92692 538 aa26.83■■□□□ 1.89
KRT18P55-201ENST00000577198 F6X3S4 739 aa26.82■■□□□ 1.88
KRT18P55-201ENST00000577198 NUCB1Q02818 461 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms