RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 CCDC27Q2M243 656 aa21.6■■□□□ 1.05
ERCC4-208ENST00000576348 C1orf141Q5JVX7 400 aa21.6■■□□□ 1.05
ERCC4-208ENST00000576348 PDE3BQ13370 1112 aa21.59■■□□□ 1.05
ERCC4-208ENST00000576348 CALD1Q05682 793 aaKnown RBP21.58■■□□□ 1.05
ERCC4-208ENST00000576348 VPS72Q15906 364 aa21.58■■□□□ 1.05
ERCC4-208ENST00000576348 WWC1Q8IX03 1113 aa21.58■■□□□ 1.05
ERCC4-208ENST00000576348 SPATA31A1Q5TZJ5 1347 aa21.57■■□□□ 1.04
ERCC4-208ENST00000576348 SPATA31A5Q5VU36 1347 aa21.57■■□□□ 1.04
ERCC4-208ENST00000576348 SPATA31A7Q8IWB4 1347 aa21.57■■□□□ 1.04
ERCC4-208ENST00000576348 MEGF6O75095 1541 aa21.57■■□□□ 1.04
ERCC4-208ENST00000576348 GOLGA2Q08379 1002 aa21.57■■□□□ 1.04
ERCC4-208ENST00000576348 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.57■■□□□ 1.04
ERCC4-208ENST00000576348 THRAP3Q9Y2W1 955 aaKnown RBP21.57■■□□□ 1.04
ERCC4-208ENST00000576348 PLEKHG2Q9H7P9 1386 aa21.57■■□□□ 1.04
ERCC4-208ENST00000576348 NWD2Q9ULI1 1742 aa21.56■■□□□ 1.04
ERCC4-208ENST00000576348 GNAT3A8MTJ3 354 aa21.56■■□□□ 1.04
ERCC4-208ENST00000576348 CDCA7Q9BWT1 371 aaPredicted RBP21.56■■□□□ 1.04
ERCC4-208ENST00000576348 BCL9LQ86UU0 1499 aa21.56■■□□□ 1.04
ERCC4-208ENST00000576348 RGPD2P0DJD1 1756 aa21.56■■□□□ 1.04
ERCC4-208ENST00000576348 WDR63Q8IWG1 891 aa21.55■■□□□ 1.04
ERCC4-208ENST00000576348 ZCRB1Q8TBF4 217 aaKnown RBP21.55■■□□□ 1.04
ERCC4-208ENST00000576348 TRIM35Q9UPQ4 493 aa21.55■■□□□ 1.04
ERCC4-208ENST00000576348 MAP3K5Q99683 1374 aa21.55■■□□□ 1.04
ERCC4-208ENST00000576348 OVOS2A0A0G2JMS6 1433 aa21.55■■□□□ 1.04
ERCC4-208ENST00000576348 AKAP4Q5JQC9 854 aa21.54■■□□□ 1.04
ERCC4-208ENST00000576348 NRAPQ86VF7 1730 aa21.53■■□□□ 1.04
ERCC4-208ENST00000576348 A0A0G2JS52 829 aa21.53■■□□□ 1.04
ERCC4-208ENST00000576348 HTATSF1O43719 755 aaKnown RBP21.53■■□□□ 1.04
ERCC4-208ENST00000576348 MYT1Q01538 1121 aa21.53■■□□□ 1.04
ERCC4-208ENST00000576348 TRPC5Q9UL62 973 aaPredicted RBP21.53■■□□□ 1.04
ERCC4-208ENST00000576348 ZNF521Q96K83 1311 aa21.53■■□□□ 1.04
ERCC4-208ENST00000576348 MCM10Q7L590 875 aa21.52■■□□□ 1.04
ERCC4-208ENST00000576348 PHF23Q9BUL5 403 aaPredicted RBP21.52■■□□□ 1.04
ERCC4-208ENST00000576348 PCDH11XQ9BZA7 1347 aa21.52■■□□□ 1.03
ERCC4-208ENST00000576348 PCDH11YQ9BZA8 1340 aa21.52■■□□□ 1.03
ERCC4-208ENST00000576348 E9PSI1 815 aa21.51■■□□□ 1.03
ERCC4-208ENST00000576348 BARGINQ6ZT62 677 aa21.51■■□□□ 1.03
ERCC4-208ENST00000576348 IFNL2Q8IZJ0 200 aa21.51■■□□□ 1.03
ERCC4-208ENST00000576348 HSP90AB1P08238 724 aaKnown RBP21.5■■□□□ 1.03
ERCC4-208ENST00000576348 DCTN1Q14203 1278 aa21.5■■□□□ 1.03
ERCC4-208ENST00000576348 THUMPD2Q9BTF0 503 aaKnown RBP21.5■■□□□ 1.03
ERCC4-208ENST00000576348 MYH16Q9H6N6 1097 aa21.5■■□□□ 1.03
ERCC4-208ENST00000576348 LAS1LQ9Y4W2 734 aaKnown RBP21.5■■□□□ 1.03
ERCC4-208ENST00000576348 EXOC5O00471 708 aa21.49■■□□□ 1.03
ERCC4-208ENST00000576348 FAM98CQ17RN3 349 aaKnown RBP21.49■■□□□ 1.03
ERCC4-208ENST00000576348 ZNF772Q68DY9 489 aaPredicted RBP21.49■■□□□ 1.03
ERCC4-208ENST00000576348 DDX54Q8TDD1 881 aaKnown RBP21.49■■□□□ 1.03
ERCC4-208ENST00000576348 IL16Q14005 1332 aa21.49■■□□□ 1.03
ERCC4-208ENST00000576348 PHKG2P15735 406 aa21.48■■□□□ 1.03
ERCC4-208ENST00000576348 CDCA7LQ96GN5 454 aa21.48■■□□□ 1.03
ERCC4-208ENST00000576348 GJD4Q96KN9 370 aaPredicted RBP21.48■■□□□ 1.03
ERCC4-208ENST00000576348 QTRT2Q9H974 415 aaKnown RBP21.48■■□□□ 1.03
ERCC4-208ENST00000576348 DISP2A7MBM2 1401 aa21.47■■□□□ 1.03
ERCC4-208ENST00000576348 DDB1Q16531 1140 aa21.47■■□□□ 1.03
ERCC4-208ENST00000576348 MPRIPQ6WCQ1 1025 aa21.47■■□□□ 1.03
ERCC4-208ENST00000576348 PARP4Q9UKK3 1724 aaKnown RBP21.46■■□□□ 1.03
ERCC4-208ENST00000576348 GNAI1P63096 354 aa21.46■■□□□ 1.03
ERCC4-208ENST00000576348 SLFN5Q08AF3 891 aa21.46■■□□□ 1.03
ERCC4-208ENST00000576348 TEFQ10587 303 aa21.46■■□□□ 1.03
ERCC4-208ENST00000576348 ATRNO75882 1429 aa21.46■■□□□ 1.03
ERCC4-208ENST00000576348 CYP27B1O15528 508 aa21.45■■□□□ 1.02
ERCC4-208ENST00000576348 DCAF5Q96JK2 942 aa21.45■■□□□ 1.02
ERCC4-208ENST00000576348 RNMTO43148 476 aaKnown RBP21.44■■□□□ 1.02
ERCC4-208ENST00000576348 IFT57Q9NWB7 429 aa21.44■■□□□ 1.02
ERCC4-208ENST00000576348 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.43■■□□□ 1.02
ERCC4-208ENST00000576348 IL17REQ8NFR9 667 aa21.43■■□□□ 1.02
ERCC4-208ENST00000576348 TNS2Q63HR2 1409 aa21.42■■□□□ 1.02
ERCC4-208ENST00000576348 LGR6Q9HBX8 967 aa21.42■■□□□ 1.02
ERCC4-208ENST00000576348 CFAP44Q96MT7 982 aa21.41■■□□□ 1.02
ERCC4-208ENST00000576348 SPINK5Q9NQ38 1064 aaPredicted RBP21.41■■□□□ 1.02
ERCC4-208ENST00000576348 TAF7Q15545 349 aaPredicted RBP21.4■■□□□ 1.02
ERCC4-208ENST00000576348 PKD1L3Q7Z443 1732 aa21.4■■□□□ 1.02
ERCC4-208ENST00000576348 DUSP27Q5VZP5 1158 aa21.39■■□□□ 1.01
ERCC4-208ENST00000576348 TSR2Q969E8 191 aaKnown RBP21.39■■□□□ 1.01
ERCC4-208ENST00000576348 TSPYL4Q9UJ04 414 aa21.39■■□□□ 1.01
ERCC4-208ENST00000576348 FANCIQ9NVI1 1328 aa21.38■■□□□ 1.01
ERCC4-208ENST00000576348 CABP4P57796 275 aa21.38■■□□□ 1.01
ERCC4-208ENST00000576348 CEMIPQ8WUJ3 1361 aa21.37■■□□□ 1.01
ERCC4-208ENST00000576348 NKX1-1Q15270 411 aaPredicted RBP21.37■■□□□ 1.01
ERCC4-208ENST00000576348 TRMT2AQ8IZ69 625 aaKnown RBP21.37■■□□□ 1.01
ERCC4-208ENST00000576348 MBIPQ9NS73 344 aa21.37■■□□□ 1.01
ERCC4-208ENST00000576348 ZNF853P0CG23 659 aa21.36■■□□□ 1.01
ERCC4-208ENST00000576348 RBM6P78332 1123 aaKnown RBP21.36■■□□□ 1.01
ERCC4-208ENST00000576348 ILDR1Q86SU0 546 aaPredicted RBP21.36■■□□□ 1.01
ERCC4-208ENST00000576348 BABAM1Q9NWV8 329 aa21.36■■□□□ 1.01
ERCC4-208ENST00000576348 KDM6AO15550 1401 aaPredicted RBP21.36■■□□□ 1.01
ERCC4-208ENST00000576348 ERVV-2B6SEH9 535 aa21.35■■□□□ 1.01
ERCC4-208ENST00000576348 CHL1O00533 1208 aa21.35■■□□□ 1.01
ERCC4-208ENST00000576348 SEPT12Q8IYM1 358 aa21.35■■□□□ 1.01
ERCC4-208ENST00000576348 SLC52A2Q9HAB3 445 aa21.35■■□□□ 1.01
ERCC4-208ENST00000576348 MIS18AQ9NYP9 233 aa21.35■■□□□ 1.01
ERCC4-208ENST00000576348 DLG5Q8TDM6 1919 aa21.34■■□□□ 1.01
ERCC4-208ENST00000576348 BTBD11A6QL63 1104 aa21.34■■□□□ 1.01
ERCC4-208ENST00000576348 GLI3P10071 1580 aa21.34■■□□□ 1.01
ERCC4-208ENST00000576348 RXRBP28702 533 aa21.33■■□□□ 1.01
ERCC4-208ENST00000576348 MARCH10Q8NA82 808 aaPredicted RBP21.33■■□□□ 1.01
ERCC4-208ENST00000576348 WNK3Q9BYP7 1800 aa21.32■■□□□ 1
ERCC4-208ENST00000576348 ONECUT3O60422 494 aaPredicted RBP21.32■■□□□ 1
ERCC4-208ENST00000576348 EXOSC9Q06265 439 aaKnown RBP21.32■■□□□ 1
ERCC4-208ENST00000576348 NFATC2IPQ8NCF5 419 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms