RNA–Protein interactions for RNA: ENST00000576148.1

RAB40B-210, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40B, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-210ENST00000576148 ABCC6O95255 1503 aa10.8□□□□□ -0.68
RAB40B-210ENST00000576148 ARHGEF25Q86VW2 580 aa10.8□□□□□ -0.68
RAB40B-210ENST00000576148 TUBGCP6Q96RT7 1819 aa10.79□□□□□ -0.68
RAB40B-210ENST00000576148 LOC105371045A0A1W2PR82 267 aa10.79□□□□□ -0.68
RAB40B-210ENST00000576148 PRIM1P49642 420 aaKnown RBP10.79□□□□□ -0.68
RAB40B-210ENST00000576148 MKRN1Q9UHC7 482 aaKnown RBP10.79□□□□□ -0.68
RAB40B-210ENST00000576148 KCPQ6ZWJ8 1503 aa10.79□□□□□ -0.68
RAB40B-210ENST00000576148 CPSF1Q10570 1443 aaKnown RBP10.78□□□□□ -0.68
RAB40B-210ENST00000576148 LBX1P52954 281 aa10.78□□□□□ -0.68
RAB40B-210ENST00000576148 DDX54Q8TDD1 881 aaKnown RBP10.78□□□□□ -0.68
RAB40B-210ENST00000576148 NLRP2Q9NX02 1062 aa10.78□□□□□ -0.68
RAB40B-210ENST00000576148 KAT6BQ8WYB5 2073 aa10.78□□□□□ -0.68
RAB40B-210ENST00000576148 PXDNLA1KZ92 1463 aa10.77□□□□□ -0.69
RAB40B-210ENST00000576148 FCHSD2O94868 740 aa10.77□□□□□ -0.69
RAB40B-210ENST00000576148 KCNH5Q8NCM2 988 aa10.77□□□□□ -0.69
RAB40B-210ENST00000576148 COL18A1P39060 1754 aa10.76□□□□□ -0.69
RAB40B-210ENST00000576148 VEGFAP15692 232 aaPredicted RBP10.76□□□□□ -0.69
RAB40B-210ENST00000576148 TGFB2P61812 414 aa10.76□□□□□ -0.69
RAB40B-210ENST00000576148 CREBZFQ9NS37 354 aa10.76□□□□□ -0.69
RAB40B-210ENST00000576148 RNF181Q9P0P0 153 aa10.76□□□□□ -0.69
RAB40B-210ENST00000576148 KIAA1210Q9ULL0 1709 aa10.75□□□□□ -0.69
RAB40B-210ENST00000576148 SLIT3O75094 1523 aa10.75□□□□□ -0.69
RAB40B-210ENST00000576148 A0A0G2JLW4 131 aa10.75□□□□□ -0.69
RAB40B-210ENST00000576148 SOX12O15370 315 aa10.75□□□□□ -0.69
RAB40B-210ENST00000576148 ANKRD36BQ8N2N9 1353 aa10.74□□□□□ -0.69
RAB40B-210ENST00000576148 USP47Q96K76 1375 aa10.74□□□□□ -0.69
RAB40B-210ENST00000576148 ADGRB1O14514 1584 aa10.73□□□□□ -0.69
RAB40B-210ENST00000576148 CFAP44Q96MT7 982 aa10.73□□□□□ -0.69
RAB40B-210ENST00000576148 PIK3C2AO00443 1686 aa10.73□□□□□ -0.69
RAB40B-210ENST00000576148 PHF14O94880 888 aa10.72□□□□□ -0.69
RAB40B-210ENST00000576148 AK7Q96M32 723 aa10.72□□□□□ -0.69
RAB40B-210ENST00000576148 WBP1LQ9NX94 342 aa10.72□□□□□ -0.69
RAB40B-210ENST00000576148 HSPA8P11142 646 aaKnown RBP10.71□□□□□ -0.69
RAB40B-210ENST00000576148 SMIM5Q71RC9 77 aa10.71□□□□□ -0.69
RAB40B-210ENST00000576148 NSD2O96028 1365 aa10.7□□□□□ -0.7
RAB40B-210ENST00000576148 CNTNAP1P78357 1384 aa10.7□□□□□ -0.7
RAB40B-210ENST00000576148 ERBB3P21860 1342 aa10.7□□□□□ -0.7
RAB40B-210ENST00000576148 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.7□□□□□ -0.7
RAB40B-210ENST00000576148 DPEP1P16444 411 aa10.7□□□□□ -0.7
RAB40B-210ENST00000576148 SRPK2P78362 688 aaKnown RBP10.7□□□□□ -0.7
RAB40B-210ENST00000576148 LY75O60449 1722 aa10.7□□□□□ -0.7
RAB40B-210ENST00000576148 TNRC6CQ9HCJ0 1690 aaKnown RBP10.69□□□□□ -0.7
RAB40B-210ENST00000576148 MMP10P09238 476 aa10.69□□□□□ -0.7
RAB40B-210ENST00000576148 ZC3H4Q9UPT8 1303 aaKnown RBP10.68□□□□□ -0.7
RAB40B-210ENST00000576148 GLTPD2A6NH11 291 aa10.68□□□□□ -0.7
RAB40B-210ENST00000576148 VEGFBP49765 207 aa10.68□□□□□ -0.7
RAB40B-210ENST00000576148 NSD3Q9BZ95 1437 aa10.67□□□□□ -0.7
RAB40B-210ENST00000576148 SSFA2P28290 1259 aa10.67□□□□□ -0.7
RAB40B-210ENST00000576148 AMIGO3Q86WK7 504 aa10.67□□□□□ -0.7
RAB40B-210ENST00000576148 ANKRD24Q8TF21 1146 aa10.67□□□□□ -0.7
RAB40B-210ENST00000576148 DCAF5Q96JK2 942 aa10.67□□□□□ -0.7
RAB40B-210ENST00000576148 MPHOSPH9Q99550 1183 aa10.67□□□□□ -0.7
RAB40B-210ENST00000576148 CABP1Q9NZU7 370 aa10.67□□□□□ -0.7
RAB40B-210ENST00000576148 PIM2Q9P1W9 311 aa10.67□□□□□ -0.7
RAB40B-210ENST00000576148 RGPD5Q99666 1765 aa10.67□□□□□ -0.7
RAB40B-210ENST00000576148 MAP2K1Q02750 393 aaPredicted RBP10.66□□□□□ -0.7
RAB40B-210ENST00000576148 DALRD3Q5D0E6 543 aaKnown RBP10.66□□□□□ -0.7
RAB40B-210ENST00000576148 CABP2Q9NPB3 220 aa10.66□□□□□ -0.7
RAB40B-210ENST00000576148 CCDC87Q9NVE4 849 aa10.66□□□□□ -0.7
RAB40B-210ENST00000576148 KDM2AQ9Y2K7 1162 aa10.66□□□□□ -0.7
RAB40B-210ENST00000576148 PDE4DIPQ5VU43 2346 aa10.66□□□□□ -0.7
RAB40B-210ENST00000576148 PRPF38BQ5VTL8 546 aaKnown RBP10.65□□□□□ -0.7
RAB40B-210ENST00000576148 CHADLQ6NUI6 762 aa10.65□□□□□ -0.7
RAB40B-210ENST00000576148 PKD1L3Q7Z443 1732 aa10.64□□□□□ -0.71
RAB40B-210ENST00000576148 KCNA3P22001 575 aa10.64□□□□□ -0.71
RAB40B-210ENST00000576148 ZCRB1Q8TBF4 217 aaKnown RBP10.64□□□□□ -0.71
RAB40B-210ENST00000576148 USP54Q70EL1 1684 aa10.63□□□□□ -0.71
RAB40B-210ENST00000576148 TTC21BQ7Z4L5 1316 aa10.63□□□□□ -0.71
RAB40B-210ENST00000576148 NLGN1Q8N2Q7 840 aa10.63□□□□□ -0.71
RAB40B-210ENST00000576148 ZNF692Q9BU19 519 aaPredicted RBP10.63□□□□□ -0.71
RAB40B-210ENST00000576148 PALLDQ8WX93 1383 aa10.63□□□□□ -0.71
RAB40B-210ENST00000576148 C5P01031 1676 aa10.63□□□□□ -0.71
RAB40B-210ENST00000576148 N4BP2Q86UW6 1770 aaPredicted RBP10.62□□□□□ -0.71
RAB40B-210ENST00000576148 LMNB1P20700 586 aa10.62□□□□□ -0.71
RAB40B-210ENST00000576148 DPY19L2Q6NUT2 758 aa10.62□□□□□ -0.71
RAB40B-210ENST00000576148 TNRC18O15417 2968 aaPredicted RBP10.62□□□□□ -0.71
RAB40B-210ENST00000576148 TTC21AQ8NDW8 1320 aa10.61□□□□□ -0.71
RAB40B-210ENST00000576148 TMEM88BA6NKF7 163 aa10.61□□□□□ -0.71
RAB40B-210ENST00000576148 POTECB2RU33 542 aa10.61□□□□□ -0.71
RAB40B-210ENST00000576148 TMF1P82094 1093 aa10.61□□□□□ -0.71
RAB40B-210ENST00000576148 DCAF11Q8TEB1 546 aa10.61□□□□□ -0.71
RAB40B-210ENST00000576148 SMARCC1Q92922 1105 aaPredicted RBP10.61□□□□□ -0.71
RAB40B-210ENST00000576148 BEGAINQ9BUH8 593 aa10.61□□□□□ -0.71
RAB40B-210ENST00000576148 PARP3Q9Y6F1 533 aa10.61□□□□□ -0.71
RAB40B-210ENST00000576148 NFAT5O94916 1531 aa10.6□□□□□ -0.71
RAB40B-210ENST00000576148 GNPATO15228 680 aa10.6□□□□□ -0.71
RAB40B-210ENST00000576148 STAC3Q96MF2 364 aa10.6□□□□□ -0.71
RAB40B-210ENST00000576148 DOT1LQ8TEK3 1739 aa10.6□□□□□ -0.71
RAB40B-210ENST00000576148 KIAA1551Q9HCM1 1747 aa10.59□□□□□ -0.71
RAB40B-210ENST00000576148 KIF13BQ9NQT8 1826 aa10.59□□□□□ -0.71
RAB40B-210ENST00000576148 RASSF7Q02833 373 aa10.59□□□□□ -0.71
RAB40B-210ENST00000576148 DEFB115Q30KQ5 88 aa10.59□□□□□ -0.71
RAB40B-210ENST00000576148 MPRIPQ6WCQ1 1025 aa10.59□□□□□ -0.71
RAB40B-210ENST00000576148 MCOLN1Q9GZU1 580 aa10.59□□□□□ -0.71
RAB40B-210ENST00000576148 QRICH2Q9H0J4 1663 aa10.59□□□□□ -0.71
RAB40B-210ENST00000576148 C4BP0C0L5 1744 aa10.58□□□□□ -0.72
RAB40B-210ENST00000576148 LTV1Q96GA3 475 aaPredicted RBP10.58□□□□□ -0.72
RAB40B-210ENST00000576148 PASKQ96RG2 1323 aa10.58□□□□□ -0.72
RAB40B-210ENST00000576148 WDR33Q9C0J8 1336 aaKnown RBP10.58□□□□□ -0.72
RAB40B-210ENST00000576148 RASSF10A6NK89 507 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms