RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 TIMELESSQ9UNS1 1208 aa21.19■□□□□ 0.98
CTNS-209ENST00000574776 KCNQ4P56696 695 aa21.18■□□□□ 0.98
CTNS-209ENST00000574776 SLC27A3Q5K4L6 730 aa21.18■□□□□ 0.98
CTNS-209ENST00000574776 MEGF6O75095 1541 aa21.18■□□□□ 0.98
CTNS-209ENST00000574776 SGIP1Q9BQI5 828 aa21.17■□□□□ 0.98
CTNS-209ENST00000574776 MYOM1P52179 1685 aa21.16■□□□□ 0.98
CTNS-209ENST00000574776 RAPGEF4Q8WZA2 1011 aa21.16■□□□□ 0.98
CTNS-209ENST00000574776 AKT1S1Q96B36 256 aa21.16■□□□□ 0.98
CTNS-209ENST00000574776 SYT17Q9BSW7 474 aa21.16■□□□□ 0.98
CTNS-209ENST00000574776 FHDC1Q9C0D6 1143 aaPredicted RBP21.16■□□□□ 0.98
CTNS-209ENST00000574776 PAPPAQ13219 1627 aa21.15■□□□□ 0.98
CTNS-209ENST00000574776 SMG6Q86US8 1419 aaKnown RBP21.14■□□□□ 0.98
CTNS-209ENST00000574776 INSRP06213 1382 aa21.14■□□□□ 0.98
CTNS-209ENST00000574776 CGNL1Q0VF96 1302 aa21.14■□□□□ 0.97
CTNS-209ENST00000574776 TATP17735 454 aaPredicted RBP21.14■□□□□ 0.97
CTNS-209ENST00000574776 ARXQ96QS3 562 aa21.13■□□□□ 0.97
CTNS-209ENST00000574776 EMILIN1Q9Y6C2 1016 aa21.13■□□□□ 0.97
CTNS-209ENST00000574776 KIF20BQ96Q89 1820 aa21.13■□□□□ 0.97
CTNS-209ENST00000574776 NSD3Q9BZ95 1437 aa21.12■□□□□ 0.97
CTNS-209ENST00000574776 SHANK3Q9BYB0 1731 aa21.12■□□□□ 0.97
CTNS-209ENST00000574776 NSD2O96028 1365 aa21.12■□□□□ 0.97
CTNS-209ENST00000574776 FLT4P35916 1363 aa21.12■□□□□ 0.97
CTNS-209ENST00000574776 DOT1LQ8TEK3 1739 aa21.12■□□□□ 0.97
CTNS-209ENST00000574776 PPM1GO15355 546 aaPredicted RBP21.11■□□□□ 0.97
CTNS-209ENST00000574776 POLR3GLQ9BT43 218 aa21.11■□□□□ 0.97
CTNS-209ENST00000574776 TFCP2L1Q9NZI6 479 aa21.11■□□□□ 0.97
CTNS-209ENST00000574776 CLSPNQ9HAW4 1339 aa21.1■□□□□ 0.97
CTNS-209ENST00000574776 CCNL1Q9UK58 526 aaPredicted RBP21.1■□□□□ 0.97
CTNS-209ENST00000574776 KIF24Q5T7B8 1368 aa21.1■□□□□ 0.97
CTNS-209ENST00000574776 PNPLA7Q6ZV29 1317 aa21.09■□□□□ 0.97
CTNS-209ENST00000574776 SLC16A10Q8TF71 515 aa21.09■□□□□ 0.97
CTNS-209ENST00000574776 PCDH11XQ9BZA7 1347 aa21.06■□□□□ 0.96
CTNS-209ENST00000574776 PCDH11YQ9BZA8 1340 aa21.06■□□□□ 0.96
CTNS-209ENST00000574776 CYP27B1O15528 508 aa21.06■□□□□ 0.96
CTNS-209ENST00000574776 LY75O60449 1722 aa21.06■□□□□ 0.96
CTNS-209ENST00000574776 MPRIPQ6WCQ1 1025 aa21.05■□□□□ 0.96
CTNS-209ENST00000574776 POLD1P28340 1107 aa21.04■□□□□ 0.96
CTNS-209ENST00000574776 WASHC2AQ641Q2 1341 aa21.04■□□□□ 0.96
CTNS-209ENST00000574776 MSH5O43196 834 aa21.03■□□□□ 0.96
CTNS-209ENST00000574776 KLHL34Q8N239 644 aa21.03■□□□□ 0.96
CTNS-209ENST00000574776 POLKQ9UBT6 870 aa21.03■□□□□ 0.96
CTNS-209ENST00000574776 MAP2P11137 1827 aaKnown RBP21.02■□□□□ 0.96
CTNS-209ENST00000574776 QSER1Q2KHR3 1735 aa21.02■□□□□ 0.96
CTNS-209ENST00000574776 COL23A1Q86Y22 540 aaPredicted RBP21.02■□□□□ 0.96
CTNS-209ENST00000574776 EYA1Q99502 592 aa21.02■□□□□ 0.96
CTNS-209ENST00000574776 TNNT2P45379 298 aaPredicted RBP21.01■□□□□ 0.95
CTNS-209ENST00000574776 TUBGCP6Q96RT7 1819 aa21.01■□□□□ 0.95
CTNS-209ENST00000574776 HSPA5P11021 654 aaKnown RBP21■□□□□ 0.95
CTNS-209ENST00000574776 EIF4G2P78344 907 aaKnown RBP eCLIP21■□□□□ 0.954e-10■■■■■ 50.6
CTNS-209ENST00000574776 SPG7Q9UQ90 795 aa21■□□□□ 0.95
CTNS-209ENST00000574776 MAP3K5Q99683 1374 aa20.99■□□□□ 0.95
CTNS-209ENST00000574776 UTRNP46939 3433 aa20.99■□□□□ 0.95
CTNS-209ENST00000574776 GPR162Q16538 588 aa20.98■□□□□ 0.95
CTNS-209ENST00000574776 PIGBQ92521 554 aa20.98■□□□□ 0.95
CTNS-209ENST00000574776 PALLDQ8WX93 1383 aa20.97■□□□□ 0.95
CTNS-209ENST00000574776 NKX1-1Q15270 411 aaPredicted RBP20.97■□□□□ 0.95
CTNS-209ENST00000574776 CCER1Q8TC90 406 aaPredicted RBP20.97■□□□□ 0.95
CTNS-209ENST00000574776 PANK3Q9H999 370 aa20.97■□□□□ 0.95
CTNS-209ENST00000574776 NCAPD2Q15021 1401 aa20.96■□□□□ 0.95
CTNS-209ENST00000574776 SMARCC1Q92922 1105 aaPredicted RBP20.96■□□□□ 0.95
CTNS-209ENST00000574776 COL24A1Q17RW2 1714 aa20.95■□□□□ 0.94
CTNS-209ENST00000574776 EIF4A2Q14240 407 aaKnown RBP20.95■□□□□ 0.94
CTNS-209ENST00000574776 MSL1Q68DK7 614 aa20.95■□□□□ 0.94
CTNS-209ENST00000574776 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.95■□□□□ 0.94
CTNS-209ENST00000574776 ITGB4P16144 1822 aa20.94■□□□□ 0.94
CTNS-209ENST00000574776 HMGB2P26583 209 aaKnown RBP20.94■□□□□ 0.94
CTNS-209ENST00000574776 PELP1Q8IZL8 1130 aaKnown RBP20.94■□□□□ 0.94
CTNS-209ENST00000574776 ZNF784Q8NCA9 323 aaPredicted RBP20.94■□□□□ 0.94
CTNS-209ENST00000574776 PKD1L3Q7Z443 1732 aa20.94■□□□□ 0.94
CTNS-209ENST00000574776 ANKRD26Q9UPS8 1709 aa20.94■□□□□ 0.94
CTNS-209ENST00000574776 TOGARAM1Q9Y4F4 1720 aa20.93■□□□□ 0.94
CTNS-209ENST00000574776 NLGN2Q8NFZ4 835 aa20.93■□□□□ 0.94
CTNS-209ENST00000574776 IFNL2Q8IZJ0 200 aa20.92■□□□□ 0.94
CTNS-209ENST00000574776 FLAD1Q8NFF5 587 aa20.92■□□□□ 0.94
CTNS-209ENST00000574776 C5P01031 1676 aa20.92■□□□□ 0.94
CTNS-209ENST00000574776 PHKG2P15735 406 aa20.91■□□□□ 0.94
CTNS-209ENST00000574776 CHD4Q14839 1912 aa20.91■□□□□ 0.94
CTNS-209ENST00000574776 TMOD3Q9NYL9 352 aa20.91■□□□□ 0.94
CTNS-209ENST00000574776 SMIM5Q71RC9 77 aa20.9■□□□□ 0.94
CTNS-209ENST00000574776 AK7Q96M32 723 aa20.9■□□□□ 0.94
CTNS-209ENST00000574776 ASAP1Q9ULH1 1129 aa20.9■□□□□ 0.94
CTNS-209ENST00000574776 TAF1LQ8IZX4 1826 aa20.9■□□□□ 0.94
CTNS-209ENST00000574776 LOC102724428A0A0B4J2F2 783 aa20.89■□□□□ 0.93
CTNS-209ENST00000574776 SIK1P57059 783 aa20.89■□□□□ 0.93
CTNS-209ENST00000574776 AMIGO3Q86WK7 504 aa20.88■□□□□ 0.93
CTNS-209ENST00000574776 PHF14O94880 888 aa20.87■□□□□ 0.93
CTNS-209ENST00000574776 MORC1Q86VD1 984 aa20.87■□□□□ 0.93
CTNS-209ENST00000574776 LINC00116Q8NCU8 138 aa20.86■□□□□ 0.93
CTNS-209ENST00000574776 C4BP0C0L5 1744 aa20.86■□□□□ 0.93
CTNS-209ENST00000574776 IGSF1Q8N6C5 1336 aa20.85■□□□□ 0.93
CTNS-209ENST00000574776 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.85■□□□□ 0.93
CTNS-209ENST00000574776 ATP6V1AP38606 617 aa20.85■□□□□ 0.93
CTNS-209ENST00000574776 ATG3Q9NT62 314 aa20.85■□□□□ 0.93
CTNS-209ENST00000574776 ITPK1Q13572 414 aa20.84■□□□□ 0.93
CTNS-209ENST00000574776 PLEKHO1Q53GL0 409 aaPredicted RBP20.84■□□□□ 0.93
CTNS-209ENST00000574776 YBX3P16989 372 aaKnown RBP eCLIP20.83■□□□□ 0.93
CTNS-209ENST00000574776 KNSTRNQ9Y448 316 aa20.83■□□□□ 0.93
CTNS-209ENST00000574776 GOLGB1Q14789 3259 aaKnown RBP20.82■□□□□ 0.92
CTNS-209ENST00000574776 CD2APQ9Y5K6 639 aa20.82■□□□□ 0.92
CTNS-209ENST00000574776 ERVV-2B6SEH9 535 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms