RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 KIF7Q2M1P5 1343 aa27.12■■□□□ 1.93
SCARF1-208ENST00000574545 LRP5O75197 1615 aa27.09■■□□□ 1.93
SCARF1-208ENST00000574545 NCAPD2Q15021 1401 aa27.09■■□□□ 1.93
SCARF1-208ENST00000574545 TXNRD1Q16881 649 aa27.09■■□□□ 1.93
SCARF1-208ENST00000574545 SHANK3Q9BYB0 1731 aa27.09■■□□□ 1.93
SCARF1-208ENST00000574545 NSD2O96028 1365 aa27.08■■□□□ 1.93
SCARF1-208ENST00000574545 PPM1GO15355 546 aaPredicted RBP27.07■■□□□ 1.92
SCARF1-208ENST00000574545 RAPGEF4Q8WZA2 1011 aa27.07■■□□□ 1.92
SCARF1-208ENST00000574545 ANO8Q9HCE9 1232 aaPredicted RBP27.07■■□□□ 1.92
SCARF1-208ENST00000574545 KAT6BQ8WYB5 2073 aa27.05■■□□□ 1.92
SCARF1-208ENST00000574545 TATP17735 454 aaPredicted RBP27.05■■□□□ 1.92
SCARF1-208ENST00000574545 TNNT2P45379 298 aaPredicted RBP27.05■■□□□ 1.92
SCARF1-208ENST00000574545 BTAF1O14981 1849 aa27.03■■□□□ 1.92
SCARF1-208ENST00000574545 EYA1Q99502 592 aa27.03■■□□□ 1.92
SCARF1-208ENST00000574545 AMER1Q5JTC6 1135 aaPredicted RBP27.02■■□□□ 1.92
SCARF1-208ENST00000574545 KNSTRNQ9Y448 316 aa27.02■■□□□ 1.92
SCARF1-208ENST00000574545 PER1O15534 1290 aaPredicted RBP27.01■■□□□ 1.91
SCARF1-208ENST00000574545 PRIM1P49642 420 aaKnown RBP27■■□□□ 1.91
SCARF1-208ENST00000574545 EIF4A2Q14240 407 aaKnown RBP27■■□□□ 1.91
SCARF1-208ENST00000574545 MORC1Q86VD1 984 aa26.99■■□□□ 1.91
SCARF1-208ENST00000574545 CYP27B1O15528 508 aa26.98■■□□□ 1.91
SCARF1-208ENST00000574545 PCDH11XQ9BZA7 1347 aa26.96■■□□□ 1.91
SCARF1-208ENST00000574545 PCDH11YQ9BZA8 1340 aa26.96■■□□□ 1.91
SCARF1-208ENST00000574545 SLC15A2Q16348 729 aa26.96■■□□□ 1.91
SCARF1-208ENST00000574545 LRRC4BQ9NT99 713 aa26.96■■□□□ 1.91
SCARF1-208ENST00000574545 DOT1LQ8TEK3 1739 aa26.96■■□□□ 1.91
SCARF1-208ENST00000574545 SYTL4Q96C24 671 aaPredicted RBP26.94■■□□□ 1.9
SCARF1-208ENST00000574545 PDGFDQ9GZP0 370 aaPredicted RBP26.94■■□□□ 1.9
SCARF1-208ENST00000574545 PKD1L3Q7Z443 1732 aa26.93■■□□□ 1.9
SCARF1-208ENST00000574545 STK32BQ9NY57 414 aa26.93■■□□□ 1.9
SCARF1-208ENST00000574545 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.93■■□□□ 1.9
SCARF1-208ENST00000574545 PAPPAQ13219 1627 aa26.93■■□□□ 1.9
SCARF1-208ENST00000574545 IGSF1Q8N6C5 1336 aa26.92■■□□□ 1.9
SCARF1-208ENST00000574545 NKX1-1Q15270 411 aaPredicted RBP26.91■■□□□ 1.9
SCARF1-208ENST00000574545 CASZ1Q86V15 1759 aa26.91■■□□□ 1.9
SCARF1-208ENST00000574545 SLC27A3Q5K4L6 730 aa26.9■■□□□ 1.9
SCARF1-208ENST00000574545 SPG7Q9UQ90 795 aa26.89■■□□□ 1.9
SCARF1-208ENST00000574545 SPON1Q9HCB6 807 aa26.88■■□□□ 1.89
SCARF1-208ENST00000574545 PLEKHG2Q9H7P9 1386 aa26.87■■□□□ 1.89
SCARF1-208ENST00000574545 LY75O60449 1722 aa26.86■■□□□ 1.89
SCARF1-208ENST00000574545 ZNF827Q17R98 1081 aa26.86■■□□□ 1.89
SCARF1-208ENST00000574545 AKT1S1Q96B36 256 aa26.86■■□□□ 1.89
SCARF1-208ENST00000574545 NPC1L1Q9UHC9 1359 aa26.84■■□□□ 1.89
SCARF1-208ENST00000574545 IL13P35225 146 aa26.84■■□□□ 1.89
SCARF1-208ENST00000574545 TOGARAM1Q9Y4F4 1720 aa26.84■■□□□ 1.89
SCARF1-208ENST00000574545 PHKG2P15735 406 aa26.83■■□□□ 1.89
SCARF1-208ENST00000574545 KCNQ4P56696 695 aa26.83■■□□□ 1.89
SCARF1-208ENST00000574545 MPRIPQ6WCQ1 1025 aa26.82■■□□□ 1.88
SCARF1-208ENST00000574545 IFNL2Q8IZJ0 200 aa26.82■■□□□ 1.88
SCARF1-208ENST00000574545 CC2D1BQ5T0F9 858 aaKnown RBP26.81■■□□□ 1.88
SCARF1-208ENST00000574545 ZBTB7AO95365 584 aa26.8■■□□□ 1.88
SCARF1-208ENST00000574545 MTHFSP49914 203 aa26.8■■□□□ 1.88
SCARF1-208ENST00000574545 AEBP1Q8IUX7 1158 aa26.8■■□□□ 1.88
SCARF1-208ENST00000574545 ITGB4P16144 1822 aa26.79■■□□□ 1.88
SCARF1-208ENST00000574545 PTGER2P43116 358 aa26.79■■□□□ 1.88
SCARF1-208ENST00000574545 PIGBQ92521 554 aa26.79■■□□□ 1.88
SCARF1-208ENST00000574545 CCNL1Q9UK58 526 aaPredicted RBP26.79■■□□□ 1.88
SCARF1-208ENST00000574545 KDRP35968 1356 aa26.78■■□□□ 1.88
SCARF1-208ENST00000574545 SGIP1Q9BQI5 828 aa26.76■■□□□ 1.87
SCARF1-208ENST00000574545 MTFR1LQ9H019 292 aa26.76■■□□□ 1.87
SCARF1-208ENST00000574545 ATF5Q9Y2D1 282 aaPredicted RBP26.76■■□□□ 1.87
SCARF1-208ENST00000574545 PALLDQ8WX93 1383 aa26.75■■□□□ 1.87
SCARF1-208ENST00000574545 PLEKHO1Q53GL0 409 aaPredicted RBP26.75■■□□□ 1.87
SCARF1-208ENST00000574545 SULT6B1Q6IMI4 303 aa26.75■■□□□ 1.87
SCARF1-208ENST00000574545 PNPLA7Q6ZV29 1317 aa26.74■■□□□ 1.87
SCARF1-208ENST00000574545 AMOTQ4VCS5 1084 aa26.74■■□□□ 1.87
SCARF1-208ENST00000574545 QSER1Q2KHR3 1735 aa26.73■■□□□ 1.87
SCARF1-208ENST00000574545 SMARCC1Q92922 1105 aaPredicted RBP26.73■■□□□ 1.87
SCARF1-208ENST00000574545 PPP1R1BQ9UD71 204 aaPredicted RBP26.71■■□□□ 1.87
SCARF1-208ENST00000574545 TMOD3Q9NYL9 352 aa26.7■■□□□ 1.86
SCARF1-208ENST00000574545 TFCP2L1Q9NZI6 479 aa26.7■■□□□ 1.86
SCARF1-208ENST00000574545 TUBGCP6Q96RT7 1819 aa26.69■■□□□ 1.86
SCARF1-208ENST00000574545 ERVV-2B6SEH9 535 aa26.69■■□□□ 1.86
SCARF1-208ENST00000574545 ZNF530Q6P9A1 599 aaPredicted RBP26.69■■□□□ 1.86
SCARF1-208ENST00000574545 SLC16A10Q8TF71 515 aa26.69■■□□□ 1.86
SCARF1-208ENST00000574545 DCAF5Q96JK2 942 aa26.69■■□□□ 1.86
SCARF1-208ENST00000574545 HSP90AB1P08238 724 aaKnown RBP26.68■■□□□ 1.86
SCARF1-208ENST00000574545 ASAP1Q9ULH1 1129 aa26.68■■□□□ 1.86
SCARF1-208ENST00000574545 KDM6AO15550 1401 aaPredicted RBP26.67■■□□□ 1.86
SCARF1-208ENST00000574545 DIAPH1O60610 1272 aaKnown RBP26.67■■□□□ 1.86
SCARF1-208ENST00000574545 COL3A1P02461 1466 aaPredicted RBP26.67■■□□□ 1.86
SCARF1-208ENST00000574545 ATG3Q9NT62 314 aa26.66■■□□□ 1.86
SCARF1-208ENST00000574545 TAF1LQ8IZX4 1826 aa26.66■■□□□ 1.86
SCARF1-208ENST00000574545 CNGB1Q14028 1251 aaPredicted RBP26.65■■□□□ 1.86
SCARF1-208ENST00000574545 C5P01031 1676 aa26.65■■□□□ 1.86
SCARF1-208ENST00000574545 LOC102724428A0A0B4J2F2 783 aa26.64■■□□□ 1.86
SCARF1-208ENST00000574545 HMGB2P26583 209 aaKnown RBP26.64■■□□□ 1.86
SCARF1-208ENST00000574545 SIK1P57059 783 aa26.64■■□□□ 1.86
SCARF1-208ENST00000574545 COL24A1Q17RW2 1714 aa26.63■■□□□ 1.85
SCARF1-208ENST00000574545 HMOX1P09601 288 aa26.63■■□□□ 1.85
SCARF1-208ENST00000574545 COL23A1Q86Y22 540 aaPredicted RBP26.63■■□□□ 1.85
SCARF1-208ENST00000574545 C1orf141Q5JVX7 400 aa26.61■■□□□ 1.85
SCARF1-208ENST00000574545 ITPK1Q13572 414 aa26.59■■□□□ 1.85
SCARF1-208ENST00000574545 AKAP4Q5JQC9 854 aa26.59■■□□□ 1.85
SCARF1-208ENST00000574545 AMIGO3Q86WK7 504 aa26.59■■□□□ 1.85
SCARF1-208ENST00000574545 LINC00116Q8NCU8 138 aa26.59■■□□□ 1.85
SCARF1-208ENST00000574545 SLC4A9Q96Q91 983 aa26.59■■□□□ 1.85
SCARF1-208ENST00000574545 ARXQ96QS3 562 aa26.59■■□□□ 1.85
SCARF1-208ENST00000574545 C4BP0C0L5 1744 aa26.59■■□□□ 1.85
SCARF1-208ENST00000574545 CABP4P57796 275 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms