RNA–Protein interactions for RNA: ENST00000574132.5

RAB40B-209, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-209ENST00000574132 RAPGEF4Q8WZA2 1011 aa21.28■■□□□ 1
RAB40B-209ENST00000574132 SGIP1Q9BQI5 828 aa21.28■■□□□ 1
RAB40B-209ENST00000574132 RTL1A6NKG5 1358 aa21.27■■□□□ 1
RAB40B-209ENST00000574132 PAPPAQ13219 1627 aa21.27■■□□□ 1
RAB40B-209ENST00000574132 POLD1P28340 1107 aa21.27■■□□□ 1
RAB40B-209ENST00000574132 KCNQ4P56696 695 aa21.27■■□□□ 1
RAB40B-209ENST00000574132 AKT1S1Q96B36 256 aa21.27■■□□□ 1
RAB40B-209ENST00000574132 TRIM26Q12899 539 aaPredicted RBP21.26■□□□□ 0.99
RAB40B-209ENST00000574132 NBPF6Q5VWK0 638 aa21.25■□□□□ 0.99
RAB40B-209ENST00000574132 NBPF4Q96M43 638 aa21.25■□□□□ 0.99
RAB40B-209ENST00000574132 MEGF6O75095 1541 aa21.24■□□□□ 0.99
RAB40B-209ENST00000574132 TATP17735 454 aaPredicted RBP21.24■□□□□ 0.99
RAB40B-209ENST00000574132 SLC16A10Q8TF71 515 aa21.24■□□□□ 0.99
RAB40B-209ENST00000574132 CCNL1Q9UK58 526 aaPredicted RBP21.24■□□□□ 0.99
RAB40B-209ENST00000574132 RGPD2P0DJD1 1756 aa21.23■□□□□ 0.99
RAB40B-209ENST00000574132 MSH5O43196 834 aa21.23■□□□□ 0.99
RAB40B-209ENST00000574132 CGNL1Q0VF96 1302 aa21.23■□□□□ 0.99
RAB40B-209ENST00000574132 DOT1LQ8TEK3 1739 aa21.22■□□□□ 0.99
RAB40B-209ENST00000574132 GPR162Q16538 588 aa21.22■□□□□ 0.99
RAB40B-209ENST00000574132 PNPLA7Q6ZV29 1317 aa21.22■□□□□ 0.99
RAB40B-209ENST00000574132 HSP90AB2PQ58FF8 381 aa21.21■□□□□ 0.99
RAB40B-209ENST00000574132 PELP1Q8IZL8 1130 aaKnown RBP21.21■□□□□ 0.99
RAB40B-209ENST00000574132 ZNF784Q8NCA9 323 aaPredicted RBP21.19■□□□□ 0.98
RAB40B-209ENST00000574132 UTRNP46939 3433 aa21.19■□□□□ 0.98
RAB40B-209ENST00000574132 NSD2O96028 1365 aa21.19■□□□□ 0.98
RAB40B-209ENST00000574132 FLT4P35916 1363 aa21.19■□□□□ 0.98
RAB40B-209ENST00000574132 PPM1GO15355 546 aaPredicted RBP21.18■□□□□ 0.98
RAB40B-209ENST00000574132 PCDH11XQ9BZA7 1347 aa21.18■□□□□ 0.98
RAB40B-209ENST00000574132 PCDH11YQ9BZA8 1340 aa21.18■□□□□ 0.98
RAB40B-209ENST00000574132 INSRP06213 1382 aa21.18■□□□□ 0.98
RAB40B-209ENST00000574132 MAP3K5Q99683 1374 aa21.18■□□□□ 0.98
RAB40B-209ENST00000574132 SHANK3Q9BYB0 1731 aa21.16■□□□□ 0.98
RAB40B-209ENST00000574132 KIF20BQ96Q89 1820 aa21.15■□□□□ 0.98
RAB40B-209ENST00000574132 NSD3Q9BZ95 1437 aa21.15■□□□□ 0.98
RAB40B-209ENST00000574132 MPRIPQ6WCQ1 1025 aa21.15■□□□□ 0.98
RAB40B-209ENST00000574132 POLR3GLQ9BT43 218 aa21.15■□□□□ 0.98
RAB40B-209ENST00000574132 KIF24Q5T7B8 1368 aa21.14■□□□□ 0.98
RAB40B-209ENST00000574132 CARD14Q9BXL6 1004 aa21.14■□□□□ 0.97
RAB40B-209ENST00000574132 EMILIN1Q9Y6C2 1016 aa21.14■□□□□ 0.97
RAB40B-209ENST00000574132 QSER1Q2KHR3 1735 aa21.14■□□□□ 0.97
RAB40B-209ENST00000574132 LY75O60449 1722 aa21.13■□□□□ 0.97
RAB40B-209ENST00000574132 HMGB2P26583 209 aaKnown RBP21.13■□□□□ 0.97
RAB40B-209ENST00000574132 CHD4Q14839 1912 aa21.12■□□□□ 0.97
RAB40B-209ENST00000574132 COL23A1Q86Y22 540 aaPredicted RBP21.12■□□□□ 0.97
RAB40B-209ENST00000574132 TUBGCP6Q96RT7 1819 aa21.11■□□□□ 0.97
RAB40B-209ENST00000574132 MSL1Q68DK7 614 aa21.11■□□□□ 0.97
RAB40B-209ENST00000574132 PALLDQ8WX93 1383 aa21.1■□□□□ 0.97
RAB40B-209ENST00000574132 NLGN2Q8NFZ4 835 aa21.1■□□□□ 0.97
RAB40B-209ENST00000574132 CYP27B1O15528 508 aa21.09■□□□□ 0.97
RAB40B-209ENST00000574132 SMARCC1Q92922 1105 aaPredicted RBP21.09■□□□□ 0.97
RAB40B-209ENST00000574132 PCGF6Q9BYE7 350 aa21.08■□□□□ 0.97
RAB40B-209ENST00000574132 SPG7Q9UQ90 795 aa21.08■□□□□ 0.97
RAB40B-209ENST00000574132 FLAD1Q8NFF5 587 aa21.07■□□□□ 0.96
RAB40B-209ENST00000574132 AK7Q96M32 723 aa21.07■□□□□ 0.96
RAB40B-209ENST00000574132 TIMELESSQ9UNS1 1208 aa21.07■□□□□ 0.96
RAB40B-209ENST00000574132 TNNT2P45379 298 aaPredicted RBP21.04■□□□□ 0.96
RAB40B-209ENST00000574132 WASHC2AQ641Q2 1341 aa21.04■□□□□ 0.96
RAB40B-209ENST00000574132 C5P01031 1676 aa21.03■□□□□ 0.96
RAB40B-209ENST00000574132 GRIN3BO60391 1043 aa21.03■□□□□ 0.96
RAB40B-209ENST00000574132 PHF14O94880 888 aa21.03■□□□□ 0.96
RAB40B-209ENST00000574132 PIGBQ92521 554 aa21.03■□□□□ 0.96
RAB40B-209ENST00000574132 EYA1Q99502 592 aa21.03■□□□□ 0.96
RAB40B-209ENST00000574132 COL24A1Q17RW2 1714 aa21.02■□□□□ 0.96
RAB40B-209ENST00000574132 TMOD3Q9NYL9 352 aa21.02■□□□□ 0.96
RAB40B-209ENST00000574132 SENP3-EIF4A1A0A087X0R7 540 aa21■□□□□ 0.95
RAB40B-209ENST00000574132 NKX1-1Q15270 411 aaPredicted RBP21■□□□□ 0.95
RAB40B-209ENST00000574132 POLKQ9UBT6 870 aa21■□□□□ 0.95
RAB40B-209ENST00000574132 YBX3P16989 372 aaKnown RBP eCLIP20.99■□□□□ 0.95
RAB40B-209ENST00000574132 C1QTNF8P60827 252 aa20.99■□□□□ 0.95
RAB40B-209ENST00000574132 IFNL2Q8IZJ0 200 aa20.99■□□□□ 0.95
RAB40B-209ENST00000574132 MAP2P11137 1827 aaKnown RBP20.99■□□□□ 0.95
RAB40B-209ENST00000574132 ITGB4P16144 1822 aa20.99■□□□□ 0.95
RAB40B-209ENST00000574132 PKD1L3Q7Z443 1732 aa20.98■□□□□ 0.95
RAB40B-209ENST00000574132 GOLGB1Q14789 3259 aaKnown RBP20.98■□□□□ 0.95
RAB40B-209ENST00000574132 LOC102724428A0A0B4J2F2 783 aa20.98■□□□□ 0.95
RAB40B-209ENST00000574132 GIGYF1O75420 1035 aaPredicted RBP20.98■□□□□ 0.95
RAB40B-209ENST00000574132 SIK1P57059 783 aa20.98■□□□□ 0.95
RAB40B-209ENST00000574132 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.98■□□□□ 0.95
RAB40B-209ENST00000574132 CD2APQ9Y5K6 639 aa20.98■□□□□ 0.95
RAB40B-209ENST00000574132 TOGARAM1Q9Y4F4 1720 aa20.98■□□□□ 0.95
RAB40B-209ENST00000574132 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.97■□□□□ 0.95
RAB40B-209ENST00000574132 SMIM5Q71RC9 77 aa20.97■□□□□ 0.95
RAB40B-209ENST00000574132 CLSPNQ9HAW4 1339 aa20.97■□□□□ 0.95
RAB40B-209ENST00000574132 TAF1LQ8IZX4 1826 aa20.97■□□□□ 0.95
RAB40B-209ENST00000574132 NCAPD2Q15021 1401 aa20.96■□□□□ 0.95
RAB40B-209ENST00000574132 C4BP0C0L5 1744 aa20.96■□□□□ 0.95
RAB40B-209ENST00000574132 PHKG2P15735 406 aa20.96■□□□□ 0.95
RAB40B-209ENST00000574132 EIF4G2P78344 907 aaKnown RBP eCLIP20.96■□□□□ 0.95
RAB40B-209ENST00000574132 EIF4A2Q14240 407 aaKnown RBP20.96■□□□□ 0.95
RAB40B-209ENST00000574132 ASAP1Q9ULH1 1129 aa20.96■□□□□ 0.95
RAB40B-209ENST00000574132 ATP6V1AP38606 617 aa20.95■□□□□ 0.94
RAB40B-209ENST00000574132 LINC00116Q8NCU8 138 aa20.95■□□□□ 0.94
RAB40B-209ENST00000574132 GNPATO15228 680 aa20.94■□□□□ 0.94
RAB40B-209ENST00000574132 SSFA2P28290 1259 aa20.94■□□□□ 0.94
RAB40B-209ENST00000574132 ANKRD26Q9UPS8 1709 aa20.93■□□□□ 0.94
RAB40B-209ENST00000574132 AMIGO3Q86WK7 504 aa20.93■□□□□ 0.94
RAB40B-209ENST00000574132 PANK3Q9H999 370 aa20.92■□□□□ 0.94
RAB40B-209ENST00000574132 WWC3Q9ULE0 1092 aa20.92■□□□□ 0.94
RAB40B-209ENST00000574132 HSPA5P11021 654 aaKnown RBP20.91■□□□□ 0.94
RAB40B-209ENST00000574132 HSP90AB1P08238 724 aaKnown RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms