RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 TXNRD1Q16881 649 aa35.89■■■■□ 3.34
NPLOC4-215ENST00000574095 SHANK3Q9BYB0 1731 aa35.87■■■■□ 3.33
NPLOC4-215ENST00000574095 ANKRD26Q9UPS8 1709 aa35.87■■■■□ 3.33
NPLOC4-215ENST00000574095 BTAF1O14981 1849 aa35.86■■■■□ 3.33
NPLOC4-215ENST00000574095 TNNT2P45379 298 aaPredicted RBP35.86■■■■□ 3.33
NPLOC4-215ENST00000574095 RAPGEF4Q8WZA2 1011 aa35.86■■■■□ 3.33
NPLOC4-215ENST00000574095 ANO8Q9HCE9 1232 aaPredicted RBP35.86■■■■□ 3.33
NPLOC4-215ENST00000574095 POLKQ9UBT6 870 aa35.84■■■■□ 3.33
NPLOC4-215ENST00000574095 WASHC2AQ641Q2 1341 aa35.83■■■■□ 3.33
NPLOC4-215ENST00000574095 TATP17735 454 aaPredicted RBP35.82■■■■□ 3.32
NPLOC4-215ENST00000574095 SYTL4Q96C24 671 aaPredicted RBP35.79■■■■□ 3.32
NPLOC4-215ENST00000574095 DOT1LQ8TEK3 1739 aa35.77■■■■□ 3.32
NPLOC4-215ENST00000574095 PRIM1P49642 420 aaKnown RBP35.77■■■■□ 3.32
NPLOC4-215ENST00000574095 KIF7Q2M1P5 1343 aa35.77■■■■□ 3.32
NPLOC4-215ENST00000574095 STK32BQ9NY57 414 aa35.74■■■■□ 3.31
NPLOC4-215ENST00000574095 EYA1Q99502 592 aa35.72■■■■□ 3.31
NPLOC4-215ENST00000574095 PDGFDQ9GZP0 370 aaPredicted RBP35.72■■■■□ 3.31
NPLOC4-215ENST00000574095 KNSTRNQ9Y448 316 aa35.72■■■■□ 3.31
NPLOC4-215ENST00000574095 NSD2O96028 1365 aa35.72■■■■□ 3.31
NPLOC4-215ENST00000574095 SLC15A2Q16348 729 aa35.71■■■■□ 3.31
NPLOC4-215ENST00000574095 MORC1Q86VD1 984 aa35.7■■■■□ 3.31
NPLOC4-215ENST00000574095 NCAPD2Q15021 1401 aa35.69■■■■□ 3.3
NPLOC4-215ENST00000574095 PCDH11XQ9BZA7 1347 aa35.69■■■■□ 3.3
NPLOC4-215ENST00000574095 PCDH11YQ9BZA8 1340 aa35.69■■■■□ 3.3
NPLOC4-215ENST00000574095 EIF4A2Q14240 407 aaKnown RBP35.68■■■■□ 3.3
NPLOC4-215ENST00000574095 SPON1Q9HCB6 807 aa35.68■■■■□ 3.3
NPLOC4-215ENST00000574095 LRRC4BQ9NT99 713 aa35.68■■■■□ 3.3
NPLOC4-215ENST00000574095 CASZ1Q86V15 1759 aa35.68■■■■□ 3.3
NPLOC4-215ENST00000574095 CYP27B1O15528 508 aa35.65■■■■□ 3.3
NPLOC4-215ENST00000574095 PAPPAQ13219 1627 aa35.64■■■■□ 3.3
NPLOC4-215ENST00000574095 PKD1L3Q7Z443 1732 aa35.63■■■■□ 3.29
NPLOC4-215ENST00000574095 ZBTB7AO95365 584 aa35.6■■■■□ 3.29
NPLOC4-215ENST00000574095 KCNQ4P56696 695 aa35.6■■■■□ 3.29
NPLOC4-215ENST00000574095 AMER1Q5JTC6 1135 aaPredicted RBP35.6■■■■□ 3.29
NPLOC4-215ENST00000574095 SLC27A3Q5K4L6 730 aa35.6■■■■□ 3.29
NPLOC4-215ENST00000574095 SPG7Q9UQ90 795 aa35.6■■■■□ 3.29
NPLOC4-215ENST00000574095 ZNF827Q17R98 1081 aa35.59■■■■□ 3.29
NPLOC4-215ENST00000574095 LY75O60449 1722 aa35.59■■■■□ 3.29
NPLOC4-215ENST00000574095 PPP1R1BQ9UD71 204 aaPredicted RBP35.57■■■■□ 3.28
NPLOC4-215ENST00000574095 ATF5Q9Y2D1 282 aaPredicted RBP35.56■■■■□ 3.28
NPLOC4-215ENST00000574095 MPRIPQ6WCQ1 1025 aa35.55■■■■□ 3.28
NPLOC4-215ENST00000574095 TOGARAM1Q9Y4F4 1720 aa35.54■■■■□ 3.28
NPLOC4-215ENST00000574095 PER1O15534 1290 aaPredicted RBP35.54■■■■□ 3.28
NPLOC4-215ENST00000574095 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.54■■■■□ 3.28
NPLOC4-215ENST00000574095 IGSF1Q8N6C5 1336 aa35.54■■■■□ 3.28
NPLOC4-215ENST00000574095 AKT1S1Q96B36 256 aa35.53■■■■□ 3.28
NPLOC4-215ENST00000574095 ITGB4P16144 1822 aa35.53■■■■□ 3.28
NPLOC4-215ENST00000574095 NKX1-1Q15270 411 aaPredicted RBP35.52■■■■□ 3.28
NPLOC4-215ENST00000574095 CCNL1Q9UK58 526 aaPredicted RBP35.52■■■■□ 3.28
NPLOC4-215ENST00000574095 CC2D1BQ5T0F9 858 aaKnown RBP35.48■■■■□ 3.27
NPLOC4-215ENST00000574095 IFNL2Q8IZJ0 200 aa35.48■■■■□ 3.27
NPLOC4-215ENST00000574095 PHKG2P15735 406 aa35.47■■■■□ 3.27
NPLOC4-215ENST00000574095 PTGER2P43116 358 aa35.47■■■■□ 3.27
NPLOC4-215ENST00000574095 MTFR1LQ9H019 292 aa35.47■■■■□ 3.27
NPLOC4-215ENST00000574095 PIGBQ92521 554 aa35.44■■■■□ 3.26
NPLOC4-215ENST00000574095 TFCP2L1Q9NZI6 479 aa35.44■■■■□ 3.26
NPLOC4-215ENST00000574095 PALLDQ8WX93 1383 aa35.43■■■■□ 3.26
NPLOC4-215ENST00000574095 AEBP1Q8IUX7 1158 aa35.43■■■■□ 3.26
NPLOC4-215ENST00000574095 TUBGCP6Q96RT7 1819 aa35.43■■■■□ 3.26
NPLOC4-215ENST00000574095 MTHFSP49914 203 aa35.42■■■■□ 3.26
NPLOC4-215ENST00000574095 CNGB1Q14028 1251 aaPredicted RBP35.42■■■■□ 3.26
NPLOC4-215ENST00000574095 QSER1Q2KHR3 1735 aa35.42■■■■□ 3.26
NPLOC4-215ENST00000574095 PNPLA7Q6ZV29 1317 aa35.41■■■■□ 3.26
NPLOC4-215ENST00000574095 IL13P35225 146 aa35.41■■■■□ 3.26
NPLOC4-215ENST00000574095 PLEKHO1Q53GL0 409 aaPredicted RBP35.4■■■■□ 3.26
NPLOC4-215ENST00000574095 PLEKHG2Q9H7P9 1386 aa35.39■■■■□ 3.26
NPLOC4-215ENST00000574095 SULT6B1Q6IMI4 303 aa35.39■■■■□ 3.26
NPLOC4-215ENST00000574095 SMARCC1Q92922 1105 aaPredicted RBP35.39■■■■□ 3.26
NPLOC4-215ENST00000574095 SGIP1Q9BQI5 828 aa35.38■■■■□ 3.25
NPLOC4-215ENST00000574095 TMOD3Q9NYL9 352 aa35.38■■■■□ 3.25
NPLOC4-215ENST00000574095 C5P01031 1676 aa35.36■■■■□ 3.25
NPLOC4-215ENST00000574095 TAF1LQ8IZX4 1826 aa35.34■■■■□ 3.25
NPLOC4-215ENST00000574095 AMOTQ4VCS5 1084 aa35.34■■■■□ 3.25
NPLOC4-215ENST00000574095 ZNF530Q6P9A1 599 aaPredicted RBP35.34■■■■□ 3.25
NPLOC4-215ENST00000574095 SLC16A10Q8TF71 515 aa35.33■■■■□ 3.25
NPLOC4-215ENST00000574095 ASAP1Q9ULH1 1129 aa35.32■■■■□ 3.24
NPLOC4-215ENST00000574095 NPC1L1Q9UHC9 1359 aa35.32■■■■□ 3.24
NPLOC4-215ENST00000574095 KDRP35968 1356 aa35.31■■■■□ 3.24
NPLOC4-215ENST00000574095 HSP90AB1P08238 724 aaKnown RBP35.3■■■■□ 3.24
NPLOC4-215ENST00000574095 DCAF5Q96JK2 942 aa35.29■■■■□ 3.24
NPLOC4-215ENST00000574095 ARXQ96QS3 562 aa35.29■■■■□ 3.24
NPLOC4-215ENST00000574095 FHDC1Q9C0D6 1143 aaPredicted RBP35.29■■■■□ 3.24
NPLOC4-215ENST00000574095 MSH5O43196 834 aa35.28■■■■□ 3.24
NPLOC4-215ENST00000574095 COL23A1Q86Y22 540 aaPredicted RBP35.28■■■■□ 3.24
NPLOC4-215ENST00000574095 ATG3Q9NT62 314 aa35.27■■■■□ 3.24
NPLOC4-215ENST00000574095 LOC102724428A0A0B4J2F2 783 aa35.26■■■■□ 3.24
NPLOC4-215ENST00000574095 ERVV-2B6SEH9 535 aa35.26■■■■□ 3.24
NPLOC4-215ENST00000574095 DIAPH1O60610 1272 aaKnown RBP35.26■■■■□ 3.24
NPLOC4-215ENST00000574095 HMGB2P26583 209 aaKnown RBP35.26■■■■□ 3.24
NPLOC4-215ENST00000574095 SIK1P57059 783 aa35.26■■■■□ 3.24
NPLOC4-215ENST00000574095 HMOX1P09601 288 aa35.25■■■■□ 3.23
NPLOC4-215ENST00000574095 C1orf141Q5JVX7 400 aa35.25■■■■□ 3.23
NPLOC4-215ENST00000574095 KDM6AO15550 1401 aaPredicted RBP35.24■■■■□ 3.23
NPLOC4-215ENST00000574095 C4BP0C0L5 1744 aa35.24■■■■□ 3.23
NPLOC4-215ENST00000574095 SYT17Q9BSW7 474 aa35.24■■■■□ 3.23
NPLOC4-215ENST00000574095 COL24A1Q17RW2 1714 aa35.22■■■■□ 3.23
NPLOC4-215ENST00000574095 POLD1P28340 1107 aa35.21■■■■□ 3.23
NPLOC4-215ENST00000574095 AK7Q96M32 723 aa35.21■■■■□ 3.23
NPLOC4-215ENST00000574095 DCAF8L1A6NGE4 600 aa35.2■■■■□ 3.23
NPLOC4-215ENST00000574095 ATP6V1AP38606 617 aa35.2■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms