RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 FLT4P35916 1363 aa15.65■□□□□ 0.1
RPAIN-214ENST00000574003 ZCRB1Q8TBF4 217 aaKnown RBP15.65■□□□□ 0.1
RPAIN-214ENST00000574003 BTAF1O14981 1849 aa15.65■□□□□ 0.1
RPAIN-214ENST00000574003 MAP2P11137 1827 aaKnown RBP15.65■□□□□ 0.1
RPAIN-214ENST00000574003 SMG6Q86US8 1419 aaKnown RBP15.63■□□□□ 0.09
RPAIN-214ENST00000574003 PRIM1P49642 420 aaKnown RBP15.63■□□□□ 0.09
RPAIN-214ENST00000574003 SYTL4Q96C24 671 aaPredicted RBP15.63■□□□□ 0.09
RPAIN-214ENST00000574003 POLKQ9UBT6 870 aa15.63■□□□□ 0.09
RPAIN-214ENST00000574003 KCNQ4P56696 695 aa15.62■□□□□ 0.09
RPAIN-214ENST00000574003 DOT1LQ8TEK3 1739 aa15.61■□□□□ 0.09
RPAIN-214ENST00000574003 RAPGEF4Q8WZA2 1011 aa15.61■□□□□ 0.09
RPAIN-214ENST00000574003 LRRC4BQ9NT99 713 aa15.61■□□□□ 0.09
RPAIN-214ENST00000574003 TATP17735 454 aaPredicted RBP15.6■□□□□ 0.09
RPAIN-214ENST00000574003 NSD2O96028 1365 aa15.6■□□□□ 0.09
RPAIN-214ENST00000574003 ANKRD26Q9UPS8 1709 aa15.6■□□□□ 0.09
RPAIN-214ENST00000574003 ZBTB7AO95365 584 aa15.59■□□□□ 0.09
RPAIN-214ENST00000574003 EYA1Q99502 592 aa15.59■□□□□ 0.09
RPAIN-214ENST00000574003 STK32BQ9NY57 414 aa15.59■□□□□ 0.09
RPAIN-214ENST00000574003 KIF7Q2M1P5 1343 aa15.59■□□□□ 0.09
RPAIN-214ENST00000574003 WASHC2AQ641Q2 1341 aa15.59■□□□□ 0.09
RPAIN-214ENST00000574003 KIF24Q5T7B8 1368 aa15.59■□□□□ 0.09
RPAIN-214ENST00000574003 CASZ1Q86V15 1759 aa15.58■□□□□ 0.08
RPAIN-214ENST00000574003 SLC15A2Q16348 729 aa15.58■□□□□ 0.08
RPAIN-214ENST00000574003 ZNF827Q17R98 1081 aa15.58■□□□□ 0.08
RPAIN-214ENST00000574003 EIF4A2Q14240 407 aaKnown RBP15.57■□□□□ 0.08
RPAIN-214ENST00000574003 SPON1Q9HCB6 807 aa15.57■□□□□ 0.08
RPAIN-214ENST00000574003 CYP27B1O15528 508 aa15.56■□□□□ 0.08
RPAIN-214ENST00000574003 ATF5Q9Y2D1 282 aaPredicted RBP15.56■□□□□ 0.08
RPAIN-214ENST00000574003 PAPPAQ13219 1627 aa15.56■□□□□ 0.08
RPAIN-214ENST00000574003 NCAPD2Q15021 1401 aa15.54■□□□□ 0.08
RPAIN-214ENST00000574003 PCDH11XQ9BZA7 1347 aa15.54■□□□□ 0.08
RPAIN-214ENST00000574003 PCDH11YQ9BZA8 1340 aa15.54■□□□□ 0.08
RPAIN-214ENST00000574003 MORC1Q86VD1 984 aa15.54■□□□□ 0.08
RPAIN-214ENST00000574003 CNGB1Q14028 1251 aaPredicted RBP15.53■□□□□ 0.08
RPAIN-214ENST00000574003 PPP1R1BQ9UD71 204 aaPredicted RBP15.53■□□□□ 0.08
RPAIN-214ENST00000574003 KNSTRNQ9Y448 316 aa15.53■□□□□ 0.08
RPAIN-214ENST00000574003 PKD1L3Q7Z443 1732 aa15.52■□□□□ 0.08
RPAIN-214ENST00000574003 TOGARAM1Q9Y4F4 1720 aa15.52■□□□□ 0.08
RPAIN-214ENST00000574003 MPRIPQ6WCQ1 1025 aa15.52■□□□□ 0.08
RPAIN-214ENST00000574003 PTGER2P43116 358 aa15.51■□□□□ 0.07
RPAIN-214ENST00000574003 AMER1Q5JTC6 1135 aaPredicted RBP15.51■□□□□ 0.07
RPAIN-214ENST00000574003 AKT1S1Q96B36 256 aa15.51■□□□□ 0.07
RPAIN-214ENST00000574003 LY75O60449 1722 aa15.51■□□□□ 0.07
RPAIN-214ENST00000574003 AEBP1Q8IUX7 1158 aa15.5■□□□□ 0.07
RPAIN-214ENST00000574003 CCNL1Q9UK58 526 aaPredicted RBP15.5■□□□□ 0.07
RPAIN-214ENST00000574003 ITGB4P16144 1822 aa15.5■□□□□ 0.07
RPAIN-214ENST00000574003 SLC27A3Q5K4L6 730 aa15.49■□□□□ 0.07
RPAIN-214ENST00000574003 CC2D1BQ5T0F9 858 aaKnown RBP15.49■□□□□ 0.07
RPAIN-214ENST00000574003 SPG7Q9UQ90 795 aa15.49■□□□□ 0.07
RPAIN-214ENST00000574003 TUBGCP6Q96RT7 1819 aa15.49■□□□□ 0.07
RPAIN-214ENST00000574003 IGSF1Q8N6C5 1336 aa15.48■□□□□ 0.07
RPAIN-214ENST00000574003 PNPLA7Q6ZV29 1317 aa15.47■□□□□ 0.07
RPAIN-214ENST00000574003 PER1O15534 1290 aaPredicted RBP15.47■□□□□ 0.07
RPAIN-214ENST00000574003 PIGBQ92521 554 aa15.47■□□□□ 0.07
RPAIN-214ENST00000574003 PHKG2P15735 406 aa15.46■□□□□ 0.07
RPAIN-214ENST00000574003 NKX1-1Q15270 411 aaPredicted RBP15.46■□□□□ 0.07
RPAIN-214ENST00000574003 MTFR1LQ9H019 292 aa15.46■□□□□ 0.07
RPAIN-214ENST00000574003 TFCP2L1Q9NZI6 479 aa15.46■□□□□ 0.07
RPAIN-214ENST00000574003 PALLDQ8WX93 1383 aa15.46■□□□□ 0.07
RPAIN-214ENST00000574003 SMIM5Q71RC9 77 aa15.45■□□□□ 0.06
RPAIN-214ENST00000574003 SGIP1Q9BQI5 828 aa15.45■□□□□ 0.06
RPAIN-214ENST00000574003 IL13P35225 146 aa15.44■□□□□ 0.06
RPAIN-214ENST00000574003 MTHFSP49914 203 aa15.44■□□□□ 0.06
RPAIN-214ENST00000574003 IFNL2Q8IZJ0 200 aa15.44■□□□□ 0.06
RPAIN-214ENST00000574003 SULT6B1Q6IMI4 303 aa15.43■□□□□ 0.06
RPAIN-214ENST00000574003 FHDC1Q9C0D6 1143 aaPredicted RBP15.43■□□□□ 0.06
RPAIN-214ENST00000574003 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.43■□□□□ 0.062e-8■□□□□ 9.4
RPAIN-214ENST00000574003 ASAP1Q9ULH1 1129 aa15.43■□□□□ 0.06
RPAIN-214ENST00000574003 MSH5O43196 834 aa15.42■□□□□ 0.06
RPAIN-214ENST00000574003 ZNF530Q6P9A1 599 aaPredicted RBP15.42■□□□□ 0.06
RPAIN-214ENST00000574003 AMIGO3Q86WK7 504 aa15.42■□□□□ 0.06
RPAIN-214ENST00000574003 COL23A1Q86Y22 540 aaPredicted RBP15.42■□□□□ 0.06
RPAIN-214ENST00000574003 TMOD3Q9NYL9 352 aa15.42■□□□□ 0.06
RPAIN-214ENST00000574003 C5P01031 1676 aa15.41■□□□□ 0.06
RPAIN-214ENST00000574003 TAF1LQ8IZX4 1826 aa15.41■□□□□ 0.06
RPAIN-214ENST00000574003 QSER1Q2KHR3 1735 aa15.41■□□□□ 0.06
RPAIN-214ENST00000574003 MSL1Q68DK7 614 aa15.41■□□□□ 0.06
RPAIN-214ENST00000574003 HMOX1P09601 288 aa15.4■□□□□ 0.06
RPAIN-214ENST00000574003 PLEKHO1Q53GL0 409 aaPredicted RBP15.4■□□□□ 0.06
RPAIN-214ENST00000574003 ARXQ96QS3 562 aa15.4■□□□□ 0.06
RPAIN-214ENST00000574003 SYT17Q9BSW7 474 aa15.4■□□□□ 0.06
RPAIN-214ENST00000574003 ITPK1Q13572 414 aa15.39■□□□□ 0.05
RPAIN-214ENST00000574003 KLHL34Q8N239 644 aa15.39■□□□□ 0.05
RPAIN-214ENST00000574003 LINC00116Q8NCU8 138 aa15.39■□□□□ 0.05
RPAIN-214ENST00000574003 SMARCC1Q92922 1105 aaPredicted RBP15.39■□□□□ 0.05
RPAIN-214ENST00000574003 ATG3Q9NT62 314 aa15.39■□□□□ 0.05
RPAIN-214ENST00000574003 KDM6AO15550 1401 aaPredicted RBP15.39■□□□□ 0.05
RPAIN-214ENST00000574003 LOC102724428A0A0B4J2F2 783 aa15.38■□□□□ 0.05
RPAIN-214ENST00000574003 SIK1P57059 783 aa15.38■□□□□ 0.05
RPAIN-214ENST00000574003 PHF14O94880 888 aa15.37■□□□□ 0.05
RPAIN-214ENST00000574003 C4BP0C0L5 1744 aa15.37■□□□□ 0.05
RPAIN-214ENST00000574003 AMOTQ4VCS5 1084 aa15.36■□□□□ 0.05
RPAIN-214ENST00000574003 SLC16A10Q8TF71 515 aa15.36■□□□□ 0.05
RPAIN-214ENST00000574003 SLC4A9Q96Q91 983 aa15.36■□□□□ 0.05
RPAIN-214ENST00000574003 KDRP35968 1356 aa15.36■□□□□ 0.05
RPAIN-214ENST00000574003 ATP6V1AP38606 617 aa15.35■□□□□ 0.05
RPAIN-214ENST00000574003 DCAF5Q96JK2 942 aa15.35■□□□□ 0.05
RPAIN-214ENST00000574003 AK7Q96M32 723 aa15.35■□□□□ 0.05
RPAIN-214ENST00000574003 ERVV-2B6SEH9 535 aa15.34■□□□□ 0.05
RPAIN-214ENST00000574003 DIAPH1O60610 1272 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms