RNA–Protein interactions for RNA: ENST00000573891.6

CACNA1A-203, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-203ENST00000573891 MARCH10Q8NA82 808 aaPredicted RBP8.67□□□□□ -1.02
CACNA1A-203ENST00000573891 CDCA7Q9BWT1 371 aaPredicted RBP8.67□□□□□ -1.02
CACNA1A-203ENST00000573891 CREBZFQ9NS37 354 aa8.67□□□□□ -1.02
CACNA1A-203ENST00000573891 PPP1R1BQ9UD71 204 aaPredicted RBP8.67□□□□□ -1.02
CACNA1A-203ENST00000573891 TTC21BQ7Z4L5 1316 aa8.66□□□□□ -1.02
CACNA1A-203ENST00000573891 EVC2Q86UK5 1308 aa8.66□□□□□ -1.02
CACNA1A-203ENST00000573891 CARD10Q9BWT7 1032 aa8.66□□□□□ -1.02
CACNA1A-203ENST00000573891 TTC21AQ8NDW8 1320 aa8.65□□□□□ -1.02
CACNA1A-203ENST00000573891 RASEFQ8IZ41 740 aa8.65□□□□□ -1.02
CACNA1A-203ENST00000573891 KCNH5Q8NCM2 988 aa8.65□□□□□ -1.02
CACNA1A-203ENST00000573891 L3MBTL2Q969R5 705 aa8.65□□□□□ -1.02
CACNA1A-203ENST00000573891 PDGFDQ9GZP0 370 aaPredicted RBP8.65□□□□□ -1.02
CACNA1A-203ENST00000573891 SBF2Q86WG5 1849 aa8.65□□□□□ -1.02
CACNA1A-203ENST00000573891 CASZ1Q86V15 1759 aa8.65□□□□□ -1.02
CACNA1A-203ENST00000573891 TRPM1Q7Z4N2 1603 aa8.65□□□□□ -1.03
CACNA1A-203ENST00000573891 NFAT5O94916 1531 aa8.64□□□□□ -1.03
CACNA1A-203ENST00000573891 ABCC6O95255 1503 aa8.64□□□□□ -1.03
CACNA1A-203ENST00000573891 WNK3Q9BYP7 1800 aa8.64□□□□□ -1.03
CACNA1A-203ENST00000573891 TNS2Q63HR2 1409 aa8.63□□□□□ -1.03
CACNA1A-203ENST00000573891 CCDC7Q96M83 1385 aa8.63□□□□□ -1.03
CACNA1A-203ENST00000573891 PTGER2P43116 358 aa8.63□□□□□ -1.03
CACNA1A-203ENST00000573891 TXNRD1Q16881 649 aa8.63□□□□□ -1.03
CACNA1A-203ENST00000573891 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.63□□□□□ -1.03
CACNA1A-203ENST00000573891 SPDYE1Q8NFV5 336 aaPredicted RBP8.63□□□□□ -1.03
CACNA1A-203ENST00000573891 ROCK2O75116 1388 aaKnown RBP8.62□□□□□ -1.03
CACNA1A-203ENST00000573891 EXOC5O00471 708 aa8.62□□□□□ -1.03
CACNA1A-203ENST00000573891 ZBTB7AO95365 584 aa8.62□□□□□ -1.03
CACNA1A-203ENST00000573891 CSB-PGBD3P0DP91 1061 aa8.62□□□□□ -1.03
CACNA1A-203ENST00000573891 UTRNP46939 3433 aa8.62□□□□□ -1.03
CACNA1A-203ENST00000573891 USP31Q70CQ4 1352 aa8.61□□□□□ -1.03
CACNA1A-203ENST00000573891 KTN1Q86UP2 1357 aaKnown RBP8.61□□□□□ -1.03
CACNA1A-203ENST00000573891 SBNO2Q9Y2G9 1366 aa8.61□□□□□ -1.03
CACNA1A-203ENST00000573891 AKAP12Q02952 1782 aa8.61□□□□□ -1.03
CACNA1A-203ENST00000573891 ERBB3P21860 1342 aa8.61□□□□□ -1.03
CACNA1A-203ENST00000573891 SOX12O15370 315 aa8.61□□□□□ -1.03
CACNA1A-203ENST00000573891 SLC15A2Q16348 729 aa8.61□□□□□ -1.03
CACNA1A-203ENST00000573891 KCNV2Q8TDN2 545 aa8.61□□□□□ -1.03
CACNA1A-203ENST00000573891 STK32BQ9NY57 414 aa8.61□□□□□ -1.03
CACNA1A-203ENST00000573891 MYOM1P52179 1685 aa8.6□□□□□ -1.03
CACNA1A-203ENST00000573891 SIN3AQ96ST3 1273 aa8.6□□□□□ -1.03
CACNA1A-203ENST00000573891 MTFR1LQ9H019 292 aa8.6□□□□□ -1.03
CACNA1A-203ENST00000573891 NHSQ6T4R5 1651 aa8.59□□□□□ -1.03
CACNA1A-203ENST00000573891 USP54Q70EL1 1684 aa8.59□□□□□ -1.03
CACNA1A-203ENST00000573891 CD163L1Q9NR16 1453 aa8.59□□□□□ -1.03
CACNA1A-203ENST00000573891 PAPPAQ13219 1627 aa8.59□□□□□ -1.03
CACNA1A-203ENST00000573891 RGPD5Q99666 1765 aa8.59□□□□□ -1.03
CACNA1A-203ENST00000573891 PYGBP11216 843 aa8.59□□□□□ -1.03
CACNA1A-203ENST00000573891 AKT1S1Q96B36 256 aa8.59□□□□□ -1.03
CACNA1A-203ENST00000573891 SYT17Q9BSW7 474 aa8.59□□□□□ -1.03
CACNA1A-203ENST00000573891 MON2Q7Z3U7 1717 aa8.59□□□□□ -1.03
CACNA1A-203ENST00000573891 IL2RBP14784 551 aa8.58□□□□□ -1.04
CACNA1A-203ENST00000573891 NME9Q86XW9 330 aa8.58□□□□□ -1.04
CACNA1A-203ENST00000573891 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.58□□□□□ -1.04
CACNA1A-203ENST00000573891 FHDC1Q9C0D6 1143 aaPredicted RBP8.58□□□□□ -1.04
CACNA1A-203ENST00000573891 NLRP2Q9NX02 1062 aa8.58□□□□□ -1.04
CACNA1A-203ENST00000573891 MAP3K5Q99683 1374 aa8.58□□□□□ -1.04
CACNA1A-203ENST00000573891 PRR29P0C7W0 189 aa8.57□□□□□ -1.04
CACNA1A-203ENST00000573891 CHRDL2Q6WN34 429 aa8.57□□□□□ -1.04
CACNA1A-203ENST00000573891 ZNF784Q8NCA9 323 aaPredicted RBP8.57□□□□□ -1.04
CACNA1A-203ENST00000573891 ACSBG1Q96GR2 724 aa8.57□□□□□ -1.04
CACNA1A-203ENST00000573891 WDR70Q9NW82 654 aa8.57□□□□□ -1.04
CACNA1A-203ENST00000573891 EDC4Q6P2E9 1401 aaKnown RBP8.56□□□□□ -1.04
CACNA1A-203ENST00000573891 NEUROD1Q13562 356 aa8.56□□□□□ -1.04
CACNA1A-203ENST00000573891 ZNF827Q17R98 1081 aa8.56□□□□□ -1.04
CACNA1A-203ENST00000573891 ANKRD24Q8TF21 1146 aa8.56□□□□□ -1.04
CACNA1A-203ENST00000573891 HDGFL2Q7Z4V5 671 aaPredicted RBP8.55□□□□□ -1.04
CACNA1A-203ENST00000573891 CARD11Q9BXL7 1154 aa8.55□□□□□ -1.04
CACNA1A-203ENST00000573891 SLC12A5Q9H2X9 1139 aa8.55□□□□□ -1.04
CACNA1A-203ENST00000573891 LRRC4BQ9NT99 713 aa8.55□□□□□ -1.04
CACNA1A-203ENST00000573891 A0A1W2PP64 1363 aa8.55□□□□□ -1.04
CACNA1A-203ENST00000573891 BTAF1O14981 1849 aa8.54□□□□□ -1.04
CACNA1A-203ENST00000573891 BRPF1P55201 1214 aaPredicted RBP8.54□□□□□ -1.04
CACNA1A-203ENST00000573891 PUS7Q96PZ0 661 aaKnown RBP8.54□□□□□ -1.04
CACNA1A-203ENST00000573891 CLEC11AQ9Y240 323 aa8.54□□□□□ -1.04
CACNA1A-203ENST00000573891 LTN1O94822 1766 aa8.53□□□□□ -1.04
CACNA1A-203ENST00000573891 SLC27A3Q5K4L6 730 aa8.53□□□□□ -1.04
CACNA1A-203ENST00000573891 TMC1Q8TDI8 760 aa8.53□□□□□ -1.04
CACNA1A-203ENST00000573891 SLC16A10Q8TF71 515 aa8.53□□□□□ -1.04
CACNA1A-203ENST00000573891 IP6K1Q92551 441 aa8.53□□□□□ -1.04
CACNA1A-203ENST00000573891 TERF2IPQ9NYB0 399 aa8.53□□□□□ -1.04
CACNA1A-203ENST00000573891 ANKRD36BQ8N2N9 1353 aa8.52□□□□□ -1.05
CACNA1A-203ENST00000573891 PNPLA7Q6ZV29 1317 aa8.52□□□□□ -1.05
CACNA1A-203ENST00000573891 NSD2O96028 1365 aa8.51□□□□□ -1.05
CACNA1A-203ENST00000573891 FAM208AQ9UK61 1670 aaKnown RBP8.51□□□□□ -1.05
CACNA1A-203ENST00000573891 DDX54Q8TDD1 881 aaKnown RBP8.51□□□□□ -1.05
CACNA1A-203ENST00000573891 TESK2Q96S53 571 aa8.51□□□□□ -1.05
CACNA1A-203ENST00000573891 MAP3K19Q56UN5 1328 aa8.51□□□□□ -1.05
CACNA1A-203ENST00000573891 HOXC9P31274 260 aa8.5□□□□□ -1.05
CACNA1A-203ENST00000573891 PRIM1P49642 420 aaKnown RBP8.5□□□□□ -1.05
CACNA1A-203ENST00000573891 QSER1Q2KHR3 1735 aa8.5□□□□□ -1.05
CACNA1A-203ENST00000573891 HOMEZQ8IX15 550 aa8.5□□□□□ -1.05
CACNA1A-203ENST00000573891 REM2Q8IYK8 340 aaPredicted RBP8.5□□□□□ -1.05
CACNA1A-203ENST00000573891 MEGF6O75095 1541 aa8.49□□□□□ -1.05
CACNA1A-203ENST00000573891 RTL1A6NKG5 1358 aa8.49□□□□□ -1.05
CACNA1A-203ENST00000573891 COL24A1Q17RW2 1714 aa8.49□□□□□ -1.05
CACNA1A-203ENST00000573891 CHD4Q14839 1912 aa8.49□□□□□ -1.05
CACNA1A-203ENST00000573891 GOLGB1Q14789 3259 aaKnown RBP8.49□□□□□ -1.05
CACNA1A-203ENST00000573891 POLD1P28340 1107 aa8.49□□□□□ -1.05
CACNA1A-203ENST00000573891 KCNQ4P56696 695 aa8.49□□□□□ -1.05
CACNA1A-203ENST00000573891 C1QTNF8P60827 252 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms