RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 FHDC1Q9C0D6 1143 aaPredicted RBP30.84■■■□□ 2.53
SNF8-216ENST00000573795 TRIM26Q12899 539 aaPredicted RBP30.83■■■□□ 2.53
SNF8-216ENST00000573795 AKT1S1Q96B36 256 aa30.83■■■□□ 2.53
SNF8-216ENST00000573795 DCAF8L1A6NGE4 600 aa30.82■■■□□ 2.52
SNF8-216ENST00000573795 NBPF6Q5VWK0 638 aa30.81■■■□□ 2.52
SNF8-216ENST00000573795 NBPF4Q96M43 638 aa30.81■■■□□ 2.52
SNF8-216ENST00000573795 SYT17Q9BSW7 474 aa30.81■■■□□ 2.52
SNF8-216ENST00000573795 COL24A1Q17RW2 1714 aa30.81■■■□□ 2.52
SNF8-216ENST00000573795 PRIM1P49642 420 aaKnown RBP30.8■■■□□ 2.52
SNF8-216ENST00000573795 SLC27A3Q5K4L6 730 aa30.8■■■□□ 2.52
SNF8-216ENST00000573795 ZCRB1Q8TBF4 217 aaKnown RBP30.8■■■□□ 2.52
SNF8-216ENST00000573795 USHBP1Q8N6Y0 703 aa30.78■■■□□ 2.52
SNF8-216ENST00000573795 SYTL4Q96C24 671 aaPredicted RBP30.77■■■□□ 2.52
SNF8-216ENST00000573795 KCNQ4P56696 695 aa30.76■■■□□ 2.51
SNF8-216ENST00000573795 ARXQ96QS3 562 aa30.75■■■□□ 2.51
SNF8-216ENST00000573795 MAP3K5Q99683 1374 aa30.75■■■□□ 2.51
SNF8-216ENST00000573795 PNPLA7Q6ZV29 1317 aa30.74■■■□□ 2.51
SNF8-216ENST00000573795 INSRP06213 1382 aa30.74■■■□□ 2.51
SNF8-216ENST00000573795 SMG6Q86US8 1419 aaKnown RBP30.73■■■□□ 2.51
SNF8-216ENST00000573795 HSP90AB2PQ58FF8 381 aa30.73■■■□□ 2.51
SNF8-216ENST00000573795 CARD14Q9BXL6 1004 aa30.73■■■□□ 2.51
SNF8-216ENST00000573795 FLT4P35916 1363 aa30.72■■■□□ 2.51
SNF8-216ENST00000573795 CGNL1Q0VF96 1302 aa30.72■■■□□ 2.51
SNF8-216ENST00000573795 KIF24Q5T7B8 1368 aa30.7■■■□□ 2.51
SNF8-216ENST00000573795 CDCA8Q53HL2 280 aa30.7■■■□□ 2.51
SNF8-216ENST00000573795 NSD3Q9BZ95 1437 aa30.7■■■□□ 2.5
SNF8-216ENST00000573795 ANKRD26Q9UPS8 1709 aa30.7■■■□□ 2.5
SNF8-216ENST00000573795 SLC16A10Q8TF71 515 aa30.68■■■□□ 2.5
SNF8-216ENST00000573795 TOGARAM1Q9Y4F4 1720 aa30.67■■■□□ 2.5
SNF8-216ENST00000573795 RAPGEF4Q8WZA2 1011 aa30.67■■■□□ 2.5
SNF8-216ENST00000573795 CHD4Q14839 1912 aa30.66■■■□□ 2.5
SNF8-216ENST00000573795 PKD1L3Q7Z443 1732 aa30.66■■■□□ 2.5
SNF8-216ENST00000573795 TATP17735 454 aaPredicted RBP30.65■■■□□ 2.5
SNF8-216ENST00000573795 TFCP2L1Q9NZI6 479 aa30.65■■■□□ 2.5
SNF8-216ENST00000573795 CCNL1Q9UK58 526 aaPredicted RBP30.65■■■□□ 2.5
SNF8-216ENST00000573795 EMILIN1Q9Y6C2 1016 aa30.65■■■□□ 2.5
SNF8-216ENST00000573795 NCAPD2Q15021 1401 aa30.64■■■□□ 2.5
SNF8-216ENST00000573795 C5P01031 1676 aa30.64■■■□□ 2.5
SNF8-216ENST00000573795 GOLGB1Q14789 3259 aaKnown RBP30.63■■■□□ 2.49
SNF8-216ENST00000573795 PCDH11XQ9BZA7 1347 aa30.62■■■□□ 2.49
SNF8-216ENST00000573795 PCDH11YQ9BZA8 1340 aa30.62■■■□□ 2.49
SNF8-216ENST00000573795 ITGB4P16144 1822 aa30.61■■■□□ 2.49
SNF8-216ENST00000573795 TAF1LQ8IZX4 1826 aa30.61■■■□□ 2.49
SNF8-216ENST00000573795 CYP27B1O15528 508 aa30.6■■■□□ 2.49
SNF8-216ENST00000573795 TIMELESSQ9UNS1 1208 aa30.59■■■□□ 2.49
SNF8-216ENST00000573795 MAP2P11137 1827 aaKnown RBP30.59■■■□□ 2.49
SNF8-216ENST00000573795 ZNF784Q8NCA9 323 aaPredicted RBP30.58■■■□□ 2.49
SNF8-216ENST00000573795 POLD1P28340 1107 aa30.57■■■□□ 2.48
SNF8-216ENST00000573795 COL23A1Q86Y22 540 aaPredicted RBP30.56■■■□□ 2.48
SNF8-216ENST00000573795 PALLDQ8WX93 1383 aa30.54■■■□□ 2.48
SNF8-216ENST00000573795 KLHL34Q8N239 644 aa30.53■■■□□ 2.48
SNF8-216ENST00000573795 WASHC2AQ641Q2 1341 aa30.52■■■□□ 2.48
SNF8-216ENST00000573795 NLGN2Q8NFZ4 835 aa30.52■■■□□ 2.48
SNF8-216ENST00000573795 MPRIPQ6WCQ1 1025 aa30.51■■■□□ 2.47
SNF8-216ENST00000573795 C4BP0C0L5 1744 aa30.5■■■□□ 2.47
SNF8-216ENST00000573795 CLSPNQ9HAW4 1339 aa30.5■■■□□ 2.47
SNF8-216ENST00000573795 PPM1GO15355 546 aaPredicted RBP30.5■■■□□ 2.47
SNF8-216ENST00000573795 NKX1-1Q15270 411 aaPredicted RBP30.48■■■□□ 2.47
SNF8-216ENST00000573795 GPR162Q16538 588 aa30.48■■■□□ 2.47
SNF8-216ENST00000573795 EYA1Q99502 592 aa30.48■■■□□ 2.47
SNF8-216ENST00000573795 POLKQ9UBT6 870 aa30.47■■■□□ 2.47
SNF8-216ENST00000573795 MSH5O43196 834 aa30.46■■■□□ 2.47
SNF8-216ENST00000573795 UBR3Q6ZT12 1888 aa30.46■■■□□ 2.47
SNF8-216ENST00000573795 MSL1Q68DK7 614 aa30.45■■■□□ 2.47
SNF8-216ENST00000573795 PIGBQ92521 554 aa30.45■■■□□ 2.47
SNF8-216ENST00000573795 AMIGO3Q86WK7 504 aa30.44■■■□□ 2.46
SNF8-216ENST00000573795 PCGF6Q9BYE7 350 aa30.43■■■□□ 2.46
SNF8-216ENST00000573795 SPG7Q9UQ90 795 aa30.42■■■□□ 2.46
SNF8-216ENST00000573795 SMARCC1Q92922 1105 aaPredicted RBP30.41■■■□□ 2.46
SNF8-216ENST00000573795 POLR3GLQ9BT43 218 aa30.4■■■□□ 2.46
SNF8-216ENST00000573795 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.4■■■□□ 2.46
SNF8-216ENST00000573795 EIF4A2Q14240 407 aaKnown RBP30.39■■■□□ 2.46
SNF8-216ENST00000573795 PELP1Q8IZL8 1130 aaKnown RBP30.39■■■□□ 2.46
SNF8-216ENST00000573795 YBX3P16989 372 aaKnown RBP eCLIP30.38■■■□□ 2.452e-6■■□□□ 12.9
SNF8-216ENST00000573795 FLAD1Q8NFF5 587 aa30.38■■■□□ 2.45
SNF8-216ENST00000573795 PHKG2P15735 406 aa30.36■■■□□ 2.45
SNF8-216ENST00000573795 TNNT2P45379 298 aaPredicted RBP30.36■■■□□ 2.45
SNF8-216ENST00000573795 SMIM5Q71RC9 77 aa30.36■■■□□ 2.45
SNF8-216ENST00000573795 HSPA5P11021 654 aaKnown RBP30.35■■■□□ 2.45
SNF8-216ENST00000573795 HMGB2P26583 209 aaKnown RBP30.35■■■□□ 2.45
SNF8-216ENST00000573795 AK7Q96M32 723 aa30.35■■■□□ 2.45
SNF8-216ENST00000573795 LINC00116Q8NCU8 138 aa30.34■■■□□ 2.45
SNF8-216ENST00000573795 PLEKHG2Q9H7P9 1386 aa30.33■■■□□ 2.45
SNF8-216ENST00000573795 LOC102724428A0A0B4J2F2 783 aa30.33■■■□□ 2.45
SNF8-216ENST00000573795 SIK1P57059 783 aa30.33■■■□□ 2.45
SNF8-216ENST00000573795 IFNL2Q8IZJ0 200 aa30.33■■■□□ 2.45
SNF8-216ENST00000573795 ASAP1Q9ULH1 1129 aa30.33■■■□□ 2.45
SNF8-216ENST00000573795 IGSF1Q8N6C5 1336 aa30.32■■■□□ 2.44
SNF8-216ENST00000573795 TMOD3Q9NYL9 352 aa30.32■■■□□ 2.44
SNF8-216ENST00000573795 EIF4G2P78344 907 aaKnown RBP eCLIP30.31■■■□□ 2.44
SNF8-216ENST00000573795 ITPK1Q13572 414 aa30.31■■■□□ 2.44
SNF8-216ENST00000573795 PANK3Q9H999 370 aa30.31■■■□□ 2.44
SNF8-216ENST00000573795 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.3■■■□□ 2.44
SNF8-216ENST00000573795 PHF14O94880 888 aa30.3■■■□□ 2.44
SNF8-216ENST00000573795 CD2APQ9Y5K6 639 aa30.3■■■□□ 2.44
SNF8-216ENST00000573795 ATG3Q9NT62 314 aa30.28■■■□□ 2.44
SNF8-216ENST00000573795 SSFA2P28290 1259 aa30.27■■■□□ 2.44
SNF8-216ENST00000573795 KDRP35968 1356 aa30.27■■■□□ 2.44
SNF8-216ENST00000573795 GRIN3BO60391 1043 aa30.26■■■□□ 2.43
SNF8-216ENST00000573795 ZNF831Q5JPB2 1677 aa30.26■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms