RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 ARXQ96QS3 562 aa11.63□□□□□ -0.55
NPLOC4-211ENST00000573212 LRRC4BQ9NT99 713 aa11.62□□□□□ -0.55
NPLOC4-211ENST00000573212 MAP3K5Q99683 1374 aa11.62□□□□□ -0.55
NPLOC4-211ENST00000573212 UTRNP46939 3433 aa11.61□□□□□ -0.55
NPLOC4-211ENST00000573212 ERBB3P21860 1342 aa11.61□□□□□ -0.55
NPLOC4-211ENST00000573212 NFAT5O94916 1531 aa11.61□□□□□ -0.55
NPLOC4-211ENST00000573212 IL2RBP14784 551 aa11.61□□□□□ -0.55
NPLOC4-211ENST00000573212 GSE1Q14687 1217 aa11.61□□□□□ -0.55
NPLOC4-211ENST00000573212 SIN3AQ96ST3 1273 aa11.61□□□□□ -0.55
NPLOC4-211ENST00000573212 KTN1Q86UP2 1357 aaKnown RBP11.61□□□□□ -0.55
NPLOC4-211ENST00000573212 TNS2Q63HR2 1409 aa11.6□□□□□ -0.55
NPLOC4-211ENST00000573212 ZNF827Q17R98 1081 aa11.6□□□□□ -0.55
NPLOC4-211ENST00000573212 SLC16A10Q8TF71 515 aa11.6□□□□□ -0.55
NPLOC4-211ENST00000573212 AKT1S1Q96B36 256 aa11.6□□□□□ -0.55
NPLOC4-211ENST00000573212 NLRP2Q9NX02 1062 aa11.6□□□□□ -0.55
NPLOC4-211ENST00000573212 TRPM1Q7Z4N2 1603 aa11.6□□□□□ -0.55
NPLOC4-211ENST00000573212 MYOM1P52179 1685 aa11.59□□□□□ -0.55
NPLOC4-211ENST00000573212 QRICH2Q9H0J4 1663 aa11.59□□□□□ -0.55
NPLOC4-211ENST00000573212 C1QTNF8P60827 252 aa11.59□□□□□ -0.55
NPLOC4-211ENST00000573212 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.59□□□□□ -0.55
NPLOC4-211ENST00000573212 ABCC6O95255 1503 aa11.59□□□□□ -0.55
NPLOC4-211ENST00000573212 SBNO2Q9Y2G9 1366 aa11.58□□□□□ -0.56
NPLOC4-211ENST00000573212 NME9Q86XW9 330 aa11.58□□□□□ -0.56
NPLOC4-211ENST00000573212 ANKRD24Q8TF21 1146 aa11.58□□□□□ -0.56
NPLOC4-211ENST00000573212 NKX1-1Q15270 411 aaPredicted RBP11.57□□□□□ -0.56
NPLOC4-211ENST00000573212 SLC27A3Q5K4L6 730 aa11.57□□□□□ -0.56
NPLOC4-211ENST00000573212 WNK3Q9BYP7 1800 aa11.57□□□□□ -0.56
NPLOC4-211ENST00000573212 CD163L1Q9NR16 1453 aa11.57□□□□□ -0.56
NPLOC4-211ENST00000573212 ROCK2O75116 1388 aaKnown RBP11.56□□□□□ -0.56
NPLOC4-211ENST00000573212 NUBP1P53384 320 aa11.56□□□□□ -0.56
NPLOC4-211ENST00000573212 IP6K1Q92551 441 aa11.56□□□□□ -0.56
NPLOC4-211ENST00000573212 PUS7Q96PZ0 661 aaKnown RBP11.56□□□□□ -0.56
NPLOC4-211ENST00000573212 SLC12A5Q9H2X9 1139 aa11.56□□□□□ -0.56
NPLOC4-211ENST00000573212 RGPD5Q99666 1765 aa11.56□□□□□ -0.56
NPLOC4-211ENST00000573212 PAPPAQ13219 1627 aa11.56□□□□□ -0.56
NPLOC4-211ENST00000573212 NHSQ6T4R5 1651 aa11.55□□□□□ -0.56
NPLOC4-211ENST00000573212 PNPLA7Q6ZV29 1317 aa11.55□□□□□ -0.56
NPLOC4-211ENST00000573212 AKAP12Q02952 1782 aa11.54□□□□□ -0.56
NPLOC4-211ENST00000573212 GPR162Q16538 588 aa11.54□□□□□ -0.56
NPLOC4-211ENST00000573212 DDX54Q8TDD1 881 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-211ENST00000573212 SENP3-EIF4A1A0A087X0R7 540 aa11.53□□□□□ -0.56
NPLOC4-211ENST00000573212 GTPBP6O43824 516 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-211ENST00000573212 PRIM1P49642 420 aaKnown RBP11.53□□□□□ -0.56
NPLOC4-211ENST00000573212 NEUROD1Q13562 356 aa11.53□□□□□ -0.56
NPLOC4-211ENST00000573212 HDGFL2Q7Z4V5 671 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-211ENST00000573212 RIOK3O14730 519 aaKnown RBP11.52□□□□□ -0.57
NPLOC4-211ENST00000573212 POLD1P28340 1107 aa11.52□□□□□ -0.57
NPLOC4-211ENST00000573212 KCNQ4P56696 695 aa11.52□□□□□ -0.57
NPLOC4-211ENST00000573212 TMC1Q8TDI8 760 aa11.52□□□□□ -0.57
NPLOC4-211ENST00000573212 EDC4Q6P2E9 1401 aaKnown RBP11.52□□□□□ -0.57
NPLOC4-211ENST00000573212 NLGN2Q8NFZ4 835 aa11.51□□□□□ -0.57
NPLOC4-211ENST00000573212 CARD11Q9BXL7 1154 aa11.51□□□□□ -0.57
NPLOC4-211ENST00000573212 TERF2IPQ9NYB0 399 aa11.51□□□□□ -0.57
NPLOC4-211ENST00000573212 TFCP2L1Q9NZI6 479 aa11.51□□□□□ -0.57
NPLOC4-211ENST00000573212 USP54Q70EL1 1684 aa11.51□□□□□ -0.57
NPLOC4-211ENST00000573212 ANKRD36BQ8N2N9 1353 aa11.51□□□□□ -0.57
NPLOC4-211ENST00000573212 FBLN1P23142 703 aa11.5□□□□□ -0.57
NPLOC4-211ENST00000573212 ZCRB1Q8TBF4 217 aaKnown RBP11.5□□□□□ -0.57
NPLOC4-211ENST00000573212 NSD2O96028 1365 aa11.5□□□□□ -0.57
NPLOC4-211ENST00000573212 MON2Q7Z3U7 1717 aa11.49□□□□□ -0.57
NPLOC4-211ENST00000573212 HOXC9P31274 260 aa11.49□□□□□ -0.57
NPLOC4-211ENST00000573212 COL23A1Q86Y22 540 aaPredicted RBP11.49□□□□□ -0.57
NPLOC4-211ENST00000573212 LTV1Q96GA3 475 aaPredicted RBP11.49□□□□□ -0.57
NPLOC4-211ENST00000573212 A0A1W2PP64 1363 aa11.49□□□□□ -0.57
NPLOC4-211ENST00000573212 BTAF1O14981 1849 aa11.49□□□□□ -0.57
NPLOC4-211ENST00000573212 GRIN3BO60391 1043 aa11.48□□□□□ -0.57
NPLOC4-211ENST00000573212 YBX3P16989 372 aaKnown RBP eCLIP11.48□□□□□ -0.57
NPLOC4-211ENST00000573212 SYTL4Q96C24 671 aaPredicted RBP11.48□□□□□ -0.57
NPLOC4-211ENST00000573212 MAP3K19Q56UN5 1328 aa11.48□□□□□ -0.57
NPLOC4-211ENST00000573212 COL24A1Q17RW2 1714 aa11.48□□□□□ -0.57
NPLOC4-211ENST00000573212 GIGYF1O75420 1035 aaPredicted RBP11.47□□□□□ -0.57
NPLOC4-211ENST00000573212 TESK2Q96S53 571 aa11.47□□□□□ -0.57
NPLOC4-211ENST00000573212 RBM42Q9BTD8 480 aaKnown RBP11.47□□□□□ -0.57
NPLOC4-211ENST00000573212 NBPF6Q5VWK0 638 aa11.46□□□□□ -0.57
NPLOC4-211ENST00000573212 COG3Q96JB2 828 aa11.46□□□□□ -0.57
NPLOC4-211ENST00000573212 NBPF4Q96M43 638 aa11.46□□□□□ -0.57
NPLOC4-211ENST00000573212 CCNL1Q9UK58 526 aaPredicted RBP11.46□□□□□ -0.57
NPLOC4-211ENST00000573212 CHD4Q14839 1912 aa11.46□□□□□ -0.58
NPLOC4-211ENST00000573212 AMPHP49418 695 aa11.45□□□□□ -0.58
NPLOC4-211ENST00000573212 DCAF8Q5TAQ9 597 aa11.45□□□□□ -0.58
NPLOC4-211ENST00000573212 IFFO2Q5TF58 517 aa11.45□□□□□ -0.58
NPLOC4-211ENST00000573212 PELP1Q8IZL8 1130 aaKnown RBP11.45□□□□□ -0.58
NPLOC4-211ENST00000573212 QSER1Q2KHR3 1735 aa11.44□□□□□ -0.58
NPLOC4-211ENST00000573212 CGNL1Q0VF96 1302 aa11.44□□□□□ -0.58
NPLOC4-211ENST00000573212 CD2APQ9Y5K6 639 aa11.44□□□□□ -0.58
NPLOC4-211ENST00000573212 FYB1O15117 783 aa11.43□□□□□ -0.58
NPLOC4-211ENST00000573212 MEGF6O75095 1541 aa11.43□□□□□ -0.58
NPLOC4-211ENST00000573212 LTN1O94822 1766 aa11.43□□□□□ -0.58
NPLOC4-211ENST00000573212 USP47Q96K76 1375 aa11.42□□□□□ -0.58
NPLOC4-211ENST00000573212 ST20-MTHFSA0A0A6YYL1 179 aa11.42□□□□□ -0.58
NPLOC4-211ENST00000573212 CHRM1P11229 460 aaPredicted RBP11.42□□□□□ -0.58
NPLOC4-211ENST00000573212 HMGB2P26583 209 aaKnown RBP11.42□□□□□ -0.58
NPLOC4-211ENST00000573212 RRS1Q15050 365 aaKnown RBP11.42□□□□□ -0.58
NPLOC4-211ENST00000573212 FLAD1Q8NFF5 587 aa11.42□□□□□ -0.58
NPLOC4-211ENST00000573212 SPDYE1Q8NFV5 336 aaPredicted RBP11.42□□□□□ -0.58
NPLOC4-211ENST00000573212 LY75O60449 1722 aa11.41□□□□□ -0.58
NPLOC4-211ENST00000573212 SHANK3Q9BYB0 1731 aa11.41□□□□□ -0.58
NPLOC4-211ENST00000573212 FAM208AQ9UK61 1670 aaKnown RBP11.41□□□□□ -0.58
NPLOC4-211ENST00000573212 STK25O00506 426 aa11.41□□□□□ -0.58
NPLOC4-211ENST00000573212 MSL1Q68DK7 614 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms