RNA–Protein interactions for RNA: ENST00000572905.1

TOM1L1-215, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-215ENST00000572905 ZNF330Q9Y3S2 320 aaPredicted RBP9.79□□□□□ -0.84
TOM1L1-215ENST00000572905 SOCS7O14512 581 aa9.78□□□□□ -0.84
TOM1L1-215ENST00000572905 CDC14CA4D256 554 aa9.77□□□□□ -0.85
TOM1L1-215ENST00000572905 MEN1O00255 615 aa9.77□□□□□ -0.85
TOM1L1-215ENST00000572905 RNF20Q5VTR2 975 aa9.77□□□□□ -0.85
TOM1L1-215ENST00000572905 TRIM52Q96A61 297 aa9.77□□□□□ -0.85
TOM1L1-215ENST00000572905 TBC1D2BQ9UPU7 963 aa9.77□□□□□ -0.85
TOM1L1-215ENST00000572905 PCDHB11Q9Y5F2 797 aa9.77□□□□□ -0.85
TOM1L1-215ENST00000572905 ITGA6P23229 1130 aa9.76□□□□□ -0.85
TOM1L1-215ENST00000572905 SCTRP47872 440 aa9.76□□□□□ -0.85
TOM1L1-215ENST00000572905 CC2D2BQ6DHV5 1058 aa9.76□□□□□ -0.85
TOM1L1-215ENST00000572905 LYSMD3Q7Z3D4 306 aa9.76□□□□□ -0.85
TOM1L1-215ENST00000572905 SENP3-EIF4A1A0A087X0R7 540 aa9.75□□□□□ -0.85
TOM1L1-215ENST00000572905 RAD21O60216 631 aa9.75□□□□□ -0.85
TOM1L1-215ENST00000572905 MCCD1P59942 119 aaPredicted RBP9.75□□□□□ -0.85
TOM1L1-215ENST00000572905 ERVK-9P63128 1117 aa9.75□□□□□ -0.85
TOM1L1-215ENST00000572905 KRT76Q01546 638 aa9.75□□□□□ -0.85
TOM1L1-215ENST00000572905 PRICKLE2Q7Z3G6 844 aa9.75□□□□□ -0.85
TOM1L1-215ENST00000572905 ZNF592Q92610 1267 aa9.75□□□□□ -0.85
TOM1L1-215ENST00000572905 CLUAP1Q96AJ1 413 aa9.75□□□□□ -0.85
TOM1L1-215ENST00000572905 CNTNAP3BQ96NU0 1288 aa9.75□□□□□ -0.85
TOM1L1-215ENST00000572905 CNTNAP3Q9BZ76 1288 aa9.75□□□□□ -0.85
TOM1L1-215ENST00000572905 RHOQP17081 205 aa9.74□□□□□ -0.85
TOM1L1-215ENST00000572905 VWA5B2Q8N398 1253 aa9.74□□□□□ -0.85
TOM1L1-215ENST00000572905 COL25A1Q9BXS0 654 aaPredicted RBP9.74□□□□□ -0.85
TOM1L1-215ENST00000572905 A0A1W2PRU2 124 aa9.73□□□□□ -0.85
TOM1L1-215ENST00000572905 NANOS1Q8WY41 292 aaKnown RBP9.73□□□□□ -0.85
TOM1L1-215ENST00000572905 TRAK2O60296 914 aa9.72□□□□□ -0.85
TOM1L1-215ENST00000572905 RNF144AP50876 292 aaPredicted RBP9.72□□□□□ -0.85
TOM1L1-215ENST00000572905 CCDC125Q86Z20 511 aa9.72□□□□□ -0.85
TOM1L1-215ENST00000572905 ESF1Q9H501 851 aaKnown RBP9.72□□□□□ -0.85
TOM1L1-215ENST00000572905 RNFT1Q5M7Z0 435 aa9.71□□□□□ -0.86
TOM1L1-215ENST00000572905 SV2AQ7L0J3 742 aa9.71□□□□□ -0.86
TOM1L1-215ENST00000572905 CYP2U1Q7Z449 544 aa9.71□□□□□ -0.86
TOM1L1-215ENST00000572905 PROSER2Q86WR7 435 aaPredicted RBP9.71□□□□□ -0.86
TOM1L1-215ENST00000572905 NLRP3Q96P20 1036 aa9.7□□□□□ -0.86
TOM1L1-215ENST00000572905 OSBPL3Q9H4L5 887 aa9.7□□□□□ -0.86
TOM1L1-215ENST00000572905 ARHGEF10LQ9HCE6 1279 aa9.7□□□□□ -0.86
TOM1L1-215ENST00000572905 PRM3Q9NNZ6 103 aa9.7□□□□□ -0.86
TOM1L1-215ENST00000572905 RAB6BQ9NRW1 208 aa9.7□□□□□ -0.86
TOM1L1-215ENST00000572905 CEP126Q9P2H0 1117 aa9.7□□□□□ -0.86
TOM1L1-215ENST00000572905 SLC27A3Q5K4L6 730 aa9.69□□□□□ -0.86
TOM1L1-215ENST00000572905 C1orf115Q9H7X2 142 aa9.69□□□□□ -0.86
TOM1L1-215ENST00000572905 CUEDC1Q9NWM3 386 aaPredicted RBP9.69□□□□□ -0.86
TOM1L1-215ENST00000572905 ARID3CA6NKF2 412 aa9.68□□□□□ -0.86
TOM1L1-215ENST00000572905 IRF5Q13568 498 aa9.68□□□□□ -0.86
TOM1L1-215ENST00000572905 CCDC85AQ96PX6 553 aaPredicted RBP9.68□□□□□ -0.86
TOM1L1-215ENST00000572905 CDCA7Q9BWT1 371 aaPredicted RBP9.68□□□□□ -0.86
TOM1L1-215ENST00000572905 GPC1P35052 558 aa9.67□□□□□ -0.86
TOM1L1-215ENST00000572905 ABL2P42684 1182 aa9.66□□□□□ -0.86
TOM1L1-215ENST00000572905 EIF4G2P78344 907 aaKnown RBP eCLIP9.66□□□□□ -0.86
TOM1L1-215ENST00000572905 VAC14Q08AM6 782 aa9.66□□□□□ -0.86
TOM1L1-215ENST00000572905 POU4F2Q12837 409 aa9.66□□□□□ -0.86
TOM1L1-215ENST00000572905 CLN3Q13286 438 aa9.66□□□□□ -0.86
TOM1L1-215ENST00000572905 POM121Q96HA1 1249 aa9.66□□□□□ -0.86
TOM1L1-215ENST00000572905 GDPD2Q9HCC8 539 aa9.66□□□□□ -0.86
TOM1L1-215ENST00000572905 COG6Q9Y2V7 657 aa9.66□□□□□ -0.86
TOM1L1-215ENST00000572905 MYCP01106 439 aaPredicted RBP9.65□□□□□ -0.86
TOM1L1-215ENST00000572905 RIPOR1Q6ZS17 1223 aa9.65□□□□□ -0.86
TOM1L1-215ENST00000572905 ARID3AQ99856 593 aa9.65□□□□□ -0.86
TOM1L1-215ENST00000572905 FNBP4Q8N3X1 1017 aaPredicted RBP9.64□□□□□ -0.87
TOM1L1-215ENST00000572905 GAS2L1Q99501 681 aaPredicted RBP9.64□□□□□ -0.87
TOM1L1-215ENST00000572905 TSGA10IPQ3SY00 556 aa9.63□□□□□ -0.87
TOM1L1-215ENST00000572905 SLFNL1Q499Z3 407 aa9.63□□□□□ -0.87
TOM1L1-215ENST00000572905 WWC1Q8IX03 1113 aa9.63□□□□□ -0.87
TOM1L1-215ENST00000572905 GRIP2Q9C0E4 1043 aa9.63□□□□□ -0.87
TOM1L1-215ENST00000572905 DOLKQ9UPQ8 538 aa9.63□□□□□ -0.87
TOM1L1-215ENST00000572905 NBPF10Q6P3W6 841 aaKnown RBP9.62□□□□□ -0.87
TOM1L1-215ENST00000572905 SVOPQ8N4V2 548 aa9.62□□□□□ -0.87
TOM1L1-215ENST00000572905 NBPF15Q8N660 670 aa9.62□□□□□ -0.87
TOM1L1-215ENST00000572905 CNKSR1Q969H4 720 aa9.62□□□□□ -0.87
TOM1L1-215ENST00000572905 ZNF837Q96EG3 531 aaPredicted RBP9.62□□□□□ -0.87
TOM1L1-215ENST00000572905 GPR25O00155 361 aa9.61□□□□□ -0.87
TOM1L1-215ENST00000572905 GNRH1P01148 92 aa9.61□□□□□ -0.87
TOM1L1-215ENST00000572905 IL2RAP01589 272 aa9.61□□□□□ -0.87
TOM1L1-215ENST00000572905 OXLD1Q5BKU9 147 aa9.61□□□□□ -0.87
TOM1L1-215ENST00000572905 RNF135Q8IUD6 432 aa9.61□□□□□ -0.87
TOM1L1-215ENST00000572905 WHAMMQ8TF30 809 aa9.61□□□□□ -0.87
TOM1L1-215ENST00000572905 DYRK1BQ9Y463 629 aa9.61□□□□□ -0.87
TOM1L1-215ENST00000572905 GAS6Q14393 721 aa9.6□□□□□ -0.87
TOM1L1-215ENST00000572905 ZNF385CQ66K41 422 aaPredicted RBP9.6□□□□□ -0.87
TOM1L1-215ENST00000572905 TRIM22Q8IYM9 498 aa9.6□□□□□ -0.87
TOM1L1-215ENST00000572905 CCDC82Q8N4S0 544 aa9.6□□□□□ -0.87
TOM1L1-215ENST00000572905 WASLO00401 505 aaPredicted RBP9.59□□□□□ -0.87
TOM1L1-215ENST00000572905 STAU1O95793 577 aaKnown RBP9.59□□□□□ -0.87
TOM1L1-215ENST00000572905 CENPCQ03188 943 aa9.59□□□□□ -0.87
TOM1L1-215ENST00000572905 DBN1Q16643 649 aa9.59□□□□□ -0.87
TOM1L1-215ENST00000572905 TAS1R3Q7RTX0 852 aa9.59□□□□□ -0.87
TOM1L1-215ENST00000572905 PHTF2Q8N3S3 785 aa9.59□□□□□ -0.87
TOM1L1-215ENST00000572905 ESYT1Q9BSJ8 1104 aa9.59□□□□□ -0.87
TOM1L1-215ENST00000572905 SPATA31C2B4DYI2 1134 aa9.58□□□□□ -0.88
TOM1L1-215ENST00000572905 ADAMTS2O95450 1211 aa9.58□□□□□ -0.88
TOM1L1-215ENST00000572905 SLURP2P0DP57 97 aa9.58□□□□□ -0.88
TOM1L1-215ENST00000572905 PHKA2P46019 1235 aa9.58□□□□□ -0.88
TOM1L1-215ENST00000572905 TIMMDC1Q9NPL8 285 aa9.58□□□□□ -0.88
TOM1L1-215ENST00000572905 ZNF777Q9ULD5 760 aaPredicted RBP9.58□□□□□ -0.88
TOM1L1-215ENST00000572905 GTPBP3Q969Y2 492 aaKnown RBP9.57□□□□□ -0.88
TOM1L1-215ENST00000572905 ZSCAN10Q96SZ4 725 aaPredicted RBP9.57□□□□□ -0.88
TOM1L1-215ENST00000572905 ADAMTS8Q9UP79 889 aa9.57□□□□□ -0.88
TOM1L1-215ENST00000572905 USP4Q13107 963 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms