RNA–Protein interactions for RNA: ENST00000572857.5

CHRNB1-204, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 4

Gene CHRNB1, Length 539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-204ENST00000572857 RGPD4Q7Z3J3 1758 aa28.67■■■□□ 2.18
CHRNB1-204ENST00000572857 TNNT2P45379 298 aaPredicted RBP28.66■■■□□ 2.18
CHRNB1-204ENST00000572857 SPON1Q9HCB6 807 aa28.66■■■□□ 2.18
CHRNB1-204ENST00000572857 TATP17735 454 aaPredicted RBP28.65■■■□□ 2.18
CHRNB1-204ENST00000572857 PRIM1P49642 420 aaKnown RBP28.65■■■□□ 2.18
CHRNB1-204ENST00000572857 NHSQ6T4R5 1651 aa28.64■■■□□ 2.18
CHRNB1-204ENST00000572857 PDGFDQ9GZP0 370 aaPredicted RBP28.64■■■□□ 2.18
CHRNB1-204ENST00000572857 RGPD2P0DJD1 1756 aa28.63■■■□□ 2.17
CHRNB1-204ENST00000572857 SLC15A2Q16348 729 aa28.63■■■□□ 2.17
CHRNB1-204ENST00000572857 POLKQ9UBT6 870 aa28.61■■■□□ 2.17
CHRNB1-204ENST00000572857 PPP1R1BQ9UD71 204 aaPredicted RBP28.61■■■□□ 2.17
CHRNB1-204ENST00000572857 KAT6BQ8WYB5 2073 aa28.61■■■□□ 2.17
CHRNB1-204ENST00000572857 WASHC2AQ641Q2 1341 aa28.59■■■□□ 2.17
CHRNB1-204ENST00000572857 ZBTB7AO95365 584 aa28.58■■■□□ 2.17
CHRNB1-204ENST00000572857 LRRC4BQ9NT99 713 aa28.57■■■□□ 2.16
CHRNB1-204ENST00000572857 BTAF1O14981 1849 aa28.55■■■□□ 2.16
CHRNB1-204ENST00000572857 PCDH11XQ9BZA7 1347 aa28.54■■■□□ 2.16
CHRNB1-204ENST00000572857 PCDH11YQ9BZA8 1340 aa28.54■■■□□ 2.16
CHRNB1-204ENST00000572857 EYA1Q99502 592 aa28.54■■■□□ 2.16
CHRNB1-204ENST00000572857 ATF5Q9Y2D1 282 aaPredicted RBP28.54■■■□□ 2.16
CHRNB1-204ENST00000572857 KCNQ4P56696 695 aa28.53■■■□□ 2.16
CHRNB1-204ENST00000572857 SLC27A3Q5K4L6 730 aa28.52■■■□□ 2.16
CHRNB1-204ENST00000572857 CYP27B1O15528 508 aa28.51■■■□□ 2.15
CHRNB1-204ENST00000572857 ZNF827Q17R98 1081 aa28.51■■■□□ 2.15
CHRNB1-204ENST00000572857 KNSTRNQ9Y448 316 aa28.51■■■□□ 2.15
CHRNB1-204ENST00000572857 NSD2O96028 1365 aa28.5■■■□□ 2.15
CHRNB1-204ENST00000572857 MORC1Q86VD1 984 aa28.5■■■□□ 2.15
CHRNB1-204ENST00000572857 EIF4A2Q14240 407 aaKnown RBP28.49■■■□□ 2.15
CHRNB1-204ENST00000572857 SPG7Q9UQ90 795 aa28.48■■■□□ 2.15
CHRNB1-204ENST00000572857 SHANK3Q9BYB0 1731 aa28.48■■■□□ 2.15
CHRNB1-204ENST00000572857 KIF7Q2M1P5 1343 aa28.47■■■□□ 2.15
CHRNB1-204ENST00000572857 MPRIPQ6WCQ1 1025 aa28.46■■■□□ 2.15
CHRNB1-204ENST00000572857 CCNL1Q9UK58 526 aaPredicted RBP28.46■■■□□ 2.15
CHRNB1-204ENST00000572857 DOT1LQ8TEK3 1739 aa28.46■■■□□ 2.15
CHRNB1-204ENST00000572857 CASZ1Q86V15 1759 aa28.45■■■□□ 2.15
CHRNB1-204ENST00000572857 PTGER2P43116 358 aa28.45■■■□□ 2.14
CHRNB1-204ENST00000572857 AKT1S1Q96B36 256 aa28.45■■■□□ 2.14
CHRNB1-204ENST00000572857 MTFR1LQ9H019 292 aa28.45■■■□□ 2.14
CHRNB1-204ENST00000572857 MAP2P11137 1827 aaKnown RBP28.45■■■□□ 2.14
CHRNB1-204ENST00000572857 NCAPD2Q15021 1401 aa28.43■■■□□ 2.14
CHRNB1-204ENST00000572857 TFCP2L1Q9NZI6 479 aa28.42■■■□□ 2.14
CHRNB1-204ENST00000572857 ANKRD26Q9UPS8 1709 aa28.42■■■□□ 2.14
CHRNB1-204ENST00000572857 PAPPAQ13219 1627 aa28.41■■■□□ 2.14
CHRNB1-204ENST00000572857 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.4■■■□□ 2.14
CHRNB1-204ENST00000572857 NKX1-1Q15270 411 aaPredicted RBP28.38■■■□□ 2.13
CHRNB1-204ENST00000572857 AMER1Q5JTC6 1135 aaPredicted RBP28.37■■■□□ 2.13
CHRNB1-204ENST00000572857 IFNL2Q8IZJ0 200 aa28.36■■■□□ 2.13
CHRNB1-204ENST00000572857 PIGBQ92521 554 aa28.36■■■□□ 2.13
CHRNB1-204ENST00000572857 PNPLA7Q6ZV29 1317 aa28.36■■■□□ 2.13
CHRNB1-204ENST00000572857 IGSF1Q8N6C5 1336 aa28.36■■■□□ 2.13
CHRNB1-204ENST00000572857 PALLDQ8WX93 1383 aa28.36■■■□□ 2.13
CHRNB1-204ENST00000572857 PHKG2P15735 406 aa28.35■■■□□ 2.13
CHRNB1-204ENST00000572857 DCAF8L1A6NGE4 600 aa28.34■■■□□ 2.13
CHRNB1-204ENST00000572857 SGIP1Q9BQI5 828 aa28.34■■■□□ 2.13
CHRNB1-204ENST00000572857 SMARCC1Q92922 1105 aaPredicted RBP28.33■■■□□ 2.13
CHRNB1-204ENST00000572857 MSH5O43196 834 aa28.32■■■□□ 2.12
CHRNB1-204ENST00000572857 SLC16A10Q8TF71 515 aa28.32■■■□□ 2.12
CHRNB1-204ENST00000572857 ARXQ96QS3 562 aa28.32■■■□□ 2.12
CHRNB1-204ENST00000572857 FHDC1Q9C0D6 1143 aaPredicted RBP28.32■■■□□ 2.12
CHRNB1-204ENST00000572857 TMOD3Q9NYL9 352 aa28.32■■■□□ 2.12
CHRNB1-204ENST00000572857 PKD1L3Q7Z443 1732 aa28.32■■■□□ 2.12
CHRNB1-204ENST00000572857 PLEKHO1Q53GL0 409 aaPredicted RBP28.3■■■□□ 2.12
CHRNB1-204ENST00000572857 CC2D1BQ5T0F9 858 aaKnown RBP28.3■■■□□ 2.12
CHRNB1-204ENST00000572857 LY75O60449 1722 aa28.29■■■□□ 2.12
CHRNB1-204ENST00000572857 PER1O15534 1290 aaPredicted RBP28.29■■■□□ 2.12
CHRNB1-204ENST00000572857 CNGB1Q14028 1251 aaPredicted RBP28.29■■■□□ 2.12
CHRNB1-204ENST00000572857 AEBP1Q8IUX7 1158 aa28.29■■■□□ 2.12
CHRNB1-204ENST00000572857 SYT17Q9BSW7 474 aa28.29■■■□□ 2.12
CHRNB1-204ENST00000572857 SULT6B1Q6IMI4 303 aa28.27■■■□□ 2.12
CHRNB1-204ENST00000572857 POLD1P28340 1107 aa28.26■■■□□ 2.11
CHRNB1-204ENST00000572857 IL13P35225 146 aa28.26■■■□□ 2.11
CHRNB1-204ENST00000572857 MTHFSP49914 203 aa28.26■■■□□ 2.11
CHRNB1-204ENST00000572857 ZNF530Q6P9A1 599 aaPredicted RBP28.26■■■□□ 2.11
CHRNB1-204ENST00000572857 COL23A1Q86Y22 540 aaPredicted RBP28.26■■■□□ 2.11
CHRNB1-204ENST00000572857 ASAP1Q9ULH1 1129 aa28.26■■■□□ 2.11
CHRNB1-204ENST00000572857 TOGARAM1Q9Y4F4 1720 aa28.26■■■□□ 2.11
CHRNB1-204ENST00000572857 HMGB2P26583 209 aaKnown RBP28.25■■■□□ 2.11
CHRNB1-204ENST00000572857 AMOTQ4VCS5 1084 aa28.24■■■□□ 2.11
CHRNB1-204ENST00000572857 KLHL34Q8N239 644 aa28.23■■■□□ 2.11
CHRNB1-204ENST00000572857 LOC102724428A0A0B4J2F2 783 aa28.22■■■□□ 2.11
CHRNB1-204ENST00000572857 HSP90AB1P08238 724 aaKnown RBP28.22■■■□□ 2.11
CHRNB1-204ENST00000572857 SIK1P57059 783 aa28.22■■■□□ 2.11
CHRNB1-204ENST00000572857 PLEKHG2Q9H7P9 1386 aa28.22■■■□□ 2.11
CHRNB1-204ENST00000572857 DCAF5Q96JK2 942 aa28.21■■■□□ 2.11
CHRNB1-204ENST00000572857 AK7Q96M32 723 aa28.21■■■□□ 2.11
CHRNB1-204ENST00000572857 C1orf141Q5JVX7 400 aa28.2■■■□□ 2.1
CHRNB1-204ENST00000572857 ATG3Q9NT62 314 aa28.2■■■□□ 2.1
CHRNB1-204ENST00000572857 ITGB4P16144 1822 aa28.2■■■□□ 2.1
CHRNB1-204ENST00000572857 ERVV-2B6SEH9 535 aa28.19■■■□□ 2.1
CHRNB1-204ENST00000572857 MSL1Q68DK7 614 aa28.19■■■□□ 2.1
CHRNB1-204ENST00000572857 ATP6V1AP38606 617 aa28.18■■■□□ 2.1
CHRNB1-204ENST00000572857 FLAD1Q8NFF5 587 aa28.18■■■□□ 2.1
CHRNB1-204ENST00000572857 YY1P25490 414 aa28.17■■■□□ 2.1
CHRNB1-204ENST00000572857 CABP4P57796 275 aa28.17■■■□□ 2.1
CHRNB1-204ENST00000572857 SMIM5Q71RC9 77 aa28.17■■■□□ 2.1
CHRNB1-204ENST00000572857 LINC00116Q8NCU8 138 aa28.17■■■□□ 2.1
CHRNB1-204ENST00000572857 QSER1Q2KHR3 1735 aa28.16■■■□□ 2.1
CHRNB1-204ENST00000572857 PHF14O94880 888 aa28.16■■■□□ 2.1
CHRNB1-204ENST00000572857 HMOX1P09601 288 aa28.15■■■□□ 2.1
CHRNB1-204ENST00000572857 ITPK1Q13572 414 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms