RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 FYB1O15117 783 aa13.85□□□□□ -0.19
TRAPPC1-205ENST00000572656 GPR162Q16538 588 aa13.85□□□□□ -0.19
TRAPPC1-205ENST00000572656 NBPF6Q5VWK0 638 aa13.85□□□□□ -0.19
TRAPPC1-205ENST00000572656 NBPF4Q96M43 638 aa13.85□□□□□ -0.19
TRAPPC1-205ENST00000572656 CGNL1Q0VF96 1302 aa13.85□□□□□ -0.19
TRAPPC1-205ENST00000572656 RRS1Q15050 365 aaKnown RBP13.84□□□□□ -0.19
TRAPPC1-205ENST00000572656 CCNL1Q9UK58 526 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC1-205ENST00000572656 FAM208AQ9UK61 1670 aaKnown RBP13.84□□□□□ -0.19
TRAPPC1-205ENST00000572656 MEGF6O75095 1541 aa13.84□□□□□ -0.19
TRAPPC1-205ENST00000572656 TMF1P82094 1093 aa13.83□□□□□ -0.2
TRAPPC1-205ENST00000572656 KLHL34Q8N239 644 aa13.83□□□□□ -0.2
TRAPPC1-205ENST00000572656 GGNBP2Q9H3C7 697 aa13.83□□□□□ -0.2
TRAPPC1-205ENST00000572656 UTRNP46939 3433 aa13.83□□□□□ -0.2
TRAPPC1-205ENST00000572656 USHBP1Q8N6Y0 703 aa13.82□□□□□ -0.2
TRAPPC1-205ENST00000572656 RAPGEF4Q8WZA2 1011 aa13.82□□□□□ -0.2
TRAPPC1-205ENST00000572656 USP47Q96K76 1375 aa13.82□□□□□ -0.2
TRAPPC1-205ENST00000572656 SMG6Q86US8 1419 aaKnown RBP13.81□□□□□ -0.2
TRAPPC1-205ENST00000572656 TATP17735 454 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC1-205ENST00000572656 HMGB2P26583 209 aaKnown RBP13.8□□□□□ -0.2
TRAPPC1-205ENST00000572656 HSP90AB2PQ58FF8 381 aa13.8□□□□□ -0.2
TRAPPC1-205ENST00000572656 COL23A1Q86Y22 540 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC1-205ENST00000572656 NLGN2Q8NFZ4 835 aa13.8□□□□□ -0.2
TRAPPC1-205ENST00000572656 INSRP06213 1382 aa13.8□□□□□ -0.2
TRAPPC1-205ENST00000572656 MSH5O43196 834 aa13.79□□□□□ -0.2
TRAPPC1-205ENST00000572656 CDCA8Q53HL2 280 aa13.79□□□□□ -0.2
TRAPPC1-205ENST00000572656 PELP1Q8IZL8 1130 aaKnown RBP13.79□□□□□ -0.2
TRAPPC1-205ENST00000572656 KIF24Q5T7B8 1368 aa13.79□□□□□ -0.2
TRAPPC1-205ENST00000572656 C1QTNF8P60827 252 aa13.78□□□□□ -0.2
TRAPPC1-205ENST00000572656 PCDH11XQ9BZA7 1347 aa13.78□□□□□ -0.2
TRAPPC1-205ENST00000572656 PCDH11YQ9BZA8 1340 aa13.78□□□□□ -0.2
TRAPPC1-205ENST00000572656 FLT4P35916 1363 aa13.78□□□□□ -0.2
TRAPPC1-205ENST00000572656 QSER1Q2KHR3 1735 aa13.78□□□□□ -0.2
TRAPPC1-205ENST00000572656 DOT1LQ8TEK3 1739 aa13.77□□□□□ -0.21
TRAPPC1-205ENST00000572656 GRIN3BO60391 1043 aa13.76□□□□□ -0.21
TRAPPC1-205ENST00000572656 FLAD1Q8NFF5 587 aa13.76□□□□□ -0.21
TRAPPC1-205ENST00000572656 LY75O60449 1722 aa13.76□□□□□ -0.21
TRAPPC1-205ENST00000572656 COL24A1Q17RW2 1714 aa13.76□□□□□ -0.21
TRAPPC1-205ENST00000572656 PALLDQ8WX93 1383 aa13.75□□□□□ -0.21
TRAPPC1-205ENST00000572656 SENP3-EIF4A1A0A087X0R7 540 aa13.75□□□□□ -0.21
TRAPPC1-205ENST00000572656 CYP27B1O15528 508 aa13.75□□□□□ -0.21
TRAPPC1-205ENST00000572656 MSL1Q68DK7 614 aa13.75□□□□□ -0.21
TRAPPC1-205ENST00000572656 MPRIPQ6WCQ1 1025 aa13.75□□□□□ -0.21
TRAPPC1-205ENST00000572656 CARD14Q9BXL6 1004 aa13.75□□□□□ -0.21
TRAPPC1-205ENST00000572656 SHANK3Q9BYB0 1731 aa13.75□□□□□ -0.21
TRAPPC1-205ENST00000572656 YBX3P16989 372 aaKnown RBP eCLIP13.74□□□□□ -0.214e-7■■□□□ 14.4
TRAPPC1-205ENST00000572656 SMARCC1Q92922 1105 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC1-205ENST00000572656 EMILIN1Q9Y6C2 1016 aa13.74□□□□□ -0.21
TRAPPC1-205ENST00000572656 GIGYF1O75420 1035 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC1-205ENST00000572656 CD2APQ9Y5K6 639 aa13.73□□□□□ -0.21
TRAPPC1-205ENST00000572656 NKX1-1Q15270 411 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC1-205ENST00000572656 RGPD2P0DJD1 1756 aa13.72□□□□□ -0.21
TRAPPC1-205ENST00000572656 PIGBQ92521 554 aa13.71□□□□□ -0.21
TRAPPC1-205ENST00000572656 AK7Q96M32 723 aa13.71□□□□□ -0.21
TRAPPC1-205ENST00000572656 SPG7Q9UQ90 795 aa13.71□□□□□ -0.21
TRAPPC1-205ENST00000572656 NSD3Q9BZ95 1437 aa13.71□□□□□ -0.22
TRAPPC1-205ENST00000572656 TUBGCP6Q96RT7 1819 aa13.71□□□□□ -0.22
TRAPPC1-205ENST00000572656 WASHC2AQ641Q2 1341 aa13.7□□□□□ -0.22
TRAPPC1-205ENST00000572656 KAT6BQ8WYB5 2073 aa13.7□□□□□ -0.22
TRAPPC1-205ENST00000572656 PPM1GO15355 546 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC1-205ENST00000572656 NCAPD2Q15021 1401 aa13.7□□□□□ -0.22
TRAPPC1-205ENST00000572656 CHD4Q14839 1912 aa13.7□□□□□ -0.22
TRAPPC1-205ENST00000572656 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.69□□□□□ -0.22
TRAPPC1-205ENST00000572656 GOLGB1Q14789 3259 aaKnown RBP13.68□□□□□ -0.22
TRAPPC1-205ENST00000572656 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.68□□□□□ -0.22
TRAPPC1-205ENST00000572656 TRIM26Q12899 539 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC1-205ENST00000572656 AMIGO3Q86WK7 504 aa13.68□□□□□ -0.22
TRAPPC1-205ENST00000572656 EYA1Q99502 592 aa13.68□□□□□ -0.22
TRAPPC1-205ENST00000572656 C5P01031 1676 aa13.67□□□□□ -0.22
TRAPPC1-205ENST00000572656 LOC102724428A0A0B4J2F2 783 aa13.67□□□□□ -0.22
TRAPPC1-205ENST00000572656 PHF14O94880 888 aa13.67□□□□□ -0.22
TRAPPC1-205ENST00000572656 SSFA2P28290 1259 aa13.67□□□□□ -0.22
TRAPPC1-205ENST00000572656 SIK1P57059 783 aa13.67□□□□□ -0.22
TRAPPC1-205ENST00000572656 TMOD3Q9NYL9 352 aa13.67□□□□□ -0.22
TRAPPC1-205ENST00000572656 TIMELESSQ9UNS1 1208 aa13.67□□□□□ -0.22
TRAPPC1-205ENST00000572656 SMIM5Q71RC9 77 aa13.66□□□□□ -0.22
TRAPPC1-205ENST00000572656 IFNL2Q8IZJ0 200 aa13.66□□□□□ -0.22
TRAPPC1-205ENST00000572656 LINC00116Q8NCU8 138 aa13.66□□□□□ -0.22
TRAPPC1-205ENST00000572656 POLKQ9UBT6 870 aa13.66□□□□□ -0.22
TRAPPC1-205ENST00000572656 KIF20BQ96Q89 1820 aa13.65□□□□□ -0.22
TRAPPC1-205ENST00000572656 PHKG2P15735 406 aa13.65□□□□□ -0.22
TRAPPC1-205ENST00000572656 ASAP1Q9ULH1 1129 aa13.65□□□□□ -0.22
TRAPPC1-205ENST00000572656 ATP10DQ9P241 1426 aa13.64□□□□□ -0.23
TRAPPC1-205ENST00000572656 C4BP0C0L5 1744 aa13.64□□□□□ -0.23
TRAPPC1-205ENST00000572656 ITPK1Q13572 414 aa13.64□□□□□ -0.23
TRAPPC1-205ENST00000572656 PKD1L3Q7Z443 1732 aa13.64□□□□□ -0.23
TRAPPC1-205ENST00000572656 TOGARAM1Q9Y4F4 1720 aa13.64□□□□□ -0.23
TRAPPC1-205ENST00000572656 GNPATO15228 680 aa13.63□□□□□ -0.23
TRAPPC1-205ENST00000572656 ATP6V1AP38606 617 aa13.63□□□□□ -0.23
TRAPPC1-205ENST00000572656 EIF4A2Q14240 407 aaKnown RBP13.63□□□□□ -0.23
TRAPPC1-205ENST00000572656 ATG3Q9NT62 314 aa13.63□□□□□ -0.23
TRAPPC1-205ENST00000572656 IGSF1Q8N6C5 1336 aa13.63□□□□□ -0.23
TRAPPC1-205ENST00000572656 PLEKHG2Q9H7P9 1386 aa13.62□□□□□ -0.23
TRAPPC1-205ENST00000572656 GPBP1L1Q9HC44 474 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC1-205ENST00000572656 ADCY9O60503 1353 aa13.61□□□□□ -0.23
TRAPPC1-205ENST00000572656 TNNT2P45379 298 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC1-205ENST00000572656 ERVV-2B6SEH9 535 aa13.6□□□□□ -0.23
TRAPPC1-205ENST00000572656 POLR3GLQ9BT43 218 aa13.6□□□□□ -0.23
TRAPPC1-205ENST00000572656 ANKRD26Q9UPS8 1709 aa13.6□□□□□ -0.23
TRAPPC1-205ENST00000572656 TAF1LQ8IZX4 1826 aa13.6□□□□□ -0.23
TRAPPC1-205ENST00000572656 HSP90AB1P08238 724 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms