RNA–Protein interactions for RNA: ENST00000572383.1

PFN1-202, Transcript of profilin 1, humanhuman

TSL 3

Gene PFN1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-202ENST00000572383 USHBP1Q8N6Y0 703 aa24.55■■□□□ 1.52
PFN1-202ENST00000572383 KAT6BQ8WYB5 2073 aa24.55■■□□□ 1.52
PFN1-202ENST00000572383 TNS2Q63HR2 1409 aa24.54■■□□□ 1.52
PFN1-202ENST00000572383 EIF4A2Q14240 407 aaKnown RBP24.54■■□□□ 1.52
PFN1-202ENST00000572383 MARCH10Q8NA82 808 aaPredicted RBP24.54■■□□□ 1.52
PFN1-202ENST00000572383 IL2RBP14784 551 aa24.52■■□□□ 1.52
PFN1-202ENST00000572383 NHSQ6T4R5 1651 aa24.51■■□□□ 1.51
PFN1-202ENST00000572383 R3HDM1Q15032 1099 aaKnown RBP24.51■■□□□ 1.51
PFN1-202ENST00000572383 EYA1Q99502 592 aa24.5■■□□□ 1.51
PFN1-202ENST00000572383 PPP2R1AP30153 589 aa24.49■■□□□ 1.51
PFN1-202ENST00000572383 BCL11BQ9C0K0 894 aaPredicted RBP24.49■■□□□ 1.51
PFN1-202ENST00000572383 SHANK3Q9BYB0 1731 aa24.49■■□□□ 1.51
PFN1-202ENST00000572383 PTF1AQ7RTS3 328 aa24.48■■□□□ 1.51
PFN1-202ENST00000572383 MEGF6O75095 1541 aa24.47■■□□□ 1.51
PFN1-202ENST00000572383 BTAF1O14981 1849 aa24.47■■□□□ 1.51
PFN1-202ENST00000572383 NCAPD2Q15021 1401 aa24.46■■□□□ 1.51
PFN1-202ENST00000572383 PLSCR1O15162 318 aa24.45■■□□□ 1.5
PFN1-202ENST00000572383 IL13P35225 146 aa24.45■■□□□ 1.5
PFN1-202ENST00000572383 RAPGEF4Q8WZA2 1011 aa24.44■■□□□ 1.5
PFN1-202ENST00000572383 IGSF1Q8N6C5 1336 aa24.43■■□□□ 1.5
PFN1-202ENST00000572383 CASZ1Q86V15 1759 aa24.43■■□□□ 1.5
PFN1-202ENST00000572383 COL3A1P02461 1466 aaPredicted RBP24.43■■□□□ 1.5
PFN1-202ENST00000572383 DIAPH1O60610 1272 aaKnown RBP24.41■■□□□ 1.5
PFN1-202ENST00000572383 TATP17735 454 aaPredicted RBP24.41■■□□□ 1.5
PFN1-202ENST00000572383 RALBP1Q15311 655 aa24.4■■□□□ 1.5
PFN1-202ENST00000572383 NBPF14Q5TI25 921 aa24.4■■□□□ 1.5
PFN1-202ENST00000572383 AEBP1Q8IUX7 1158 aa24.38■■□□□ 1.49
PFN1-202ENST00000572383 ZCRB1Q8TBF4 217 aaKnown RBP24.38■■□□□ 1.49
PFN1-202ENST00000572383 CFAP53Q96M91 514 aa24.38■■□□□ 1.49
PFN1-202ENST00000572383 DOT1LQ8TEK3 1739 aa24.38■■□□□ 1.49
PFN1-202ENST00000572383 DDX54Q8TDD1 881 aaKnown RBP24.37■■□□□ 1.49
PFN1-202ENST00000572383 SULT6B1Q6IMI4 303 aa24.36■■□□□ 1.49
PFN1-202ENST00000572383 PROM2Q8N271 834 aa24.35■■□□□ 1.49
PFN1-202ENST00000572383 KCNQ2O43526 872 aa24.34■■□□□ 1.49
PFN1-202ENST00000572383 KDRP35968 1356 aa24.33■■□□□ 1.49
PFN1-202ENST00000572383 PRKRIP1Q9H875 184 aaPredicted RBP24.33■■□□□ 1.49
PFN1-202ENST00000572383 PKD1L3Q7Z443 1732 aa24.32■■□□□ 1.48
PFN1-202ENST00000572383 PAPPAQ13219 1627 aa24.32■■□□□ 1.48
PFN1-202ENST00000572383 U2SURPO15042 1029 aaKnown RBP24.32■■□□□ 1.48
PFN1-202ENST00000572383 HMOX1P09601 288 aa24.32■■□□□ 1.48
PFN1-202ENST00000572383 ACSBG1Q96GR2 724 aa24.32■■□□□ 1.48
PFN1-202ENST00000572383 ANO8Q9HCE9 1232 aaPredicted RBP24.32■■□□□ 1.48
PFN1-202ENST00000572383 MYBBP1AQ9BQG0 1328 aaKnown RBP24.32■■□□□ 1.48
PFN1-202ENST00000572383 LY75O60449 1722 aa24.3■■□□□ 1.48
PFN1-202ENST00000572383 SPG7Q9UQ90 795 aa24.3■■□□□ 1.48
PFN1-202ENST00000572383 PCDH11XQ9BZA7 1347 aa24.3■■□□□ 1.48
PFN1-202ENST00000572383 PCDH11YQ9BZA8 1340 aa24.3■■□□□ 1.48
PFN1-202ENST00000572383 TUBGCP6Q96RT7 1819 aa24.29■■□□□ 1.48
PFN1-202ENST00000572383 TXNRD1Q16881 649 aa24.29■■□□□ 1.48
PFN1-202ENST00000572383 CYP27B1O15528 508 aa24.28■■□□□ 1.48
PFN1-202ENST00000572383 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.28■■□□□ 1.48
PFN1-202ENST00000572383 NUDCQ9Y266 331 aa24.27■■□□□ 1.48
PFN1-202ENST00000572383 PLEKHG2Q9H7P9 1386 aa24.27■■□□□ 1.48
PFN1-202ENST00000572383 QSER1Q2KHR3 1735 aa24.27■■□□□ 1.48
PFN1-202ENST00000572383 PLEKHO1Q53GL0 409 aaPredicted RBP24.25■■□□□ 1.47
PFN1-202ENST00000572383 ITGB4P16144 1822 aa24.25■■□□□ 1.47
PFN1-202ENST00000572383 U2AF1L5P0DN76 240 aaPredicted RBP24.23■■□□□ 1.47
PFN1-202ENST00000572383 U2AF1Q01081 240 aaKnown RBP eCLIP24.23■■□□□ 1.47
PFN1-202ENST00000572383 AMOTQ4VCS5 1084 aa24.23■■□□□ 1.47
PFN1-202ENST00000572383 PDGFDQ9GZP0 370 aaPredicted RBP24.23■■□□□ 1.47
PFN1-202ENST00000572383 PHKG2P15735 406 aa24.22■■□□□ 1.47
PFN1-202ENST00000572383 IFNL2Q8IZJ0 200 aa24.22■■□□□ 1.47
PFN1-202ENST00000572383 TOGARAM1Q9Y4F4 1720 aa24.21■■□□□ 1.47
PFN1-202ENST00000572383 ANP32CO43423 234 aa24.2■■□□□ 1.46
PFN1-202ENST00000572383 PRIM1P49642 420 aaKnown RBP24.2■■□□□ 1.46
PFN1-202ENST00000572383 ZNF530Q6P9A1 599 aaPredicted RBP24.2■■□□□ 1.46
PFN1-202ENST00000572383 RSPH6AQ9H0K4 717 aa24.2■■□□□ 1.46
PFN1-202ENST00000572383 STK32BQ9NY57 414 aa24.2■■□□□ 1.46
PFN1-202ENST00000572383 NKX1-1Q15270 411 aaPredicted RBP24.19■■□□□ 1.46
PFN1-202ENST00000572383 SYTL4Q96C24 671 aaPredicted RBP24.19■■□□□ 1.46
PFN1-202ENST00000572383 SLC15A2Q16348 729 aa24.18■■□□□ 1.46
PFN1-202ENST00000572383 TAF1LQ8IZX4 1826 aa24.18■■□□□ 1.46
PFN1-202ENST00000572383 PRKAR2BP31323 418 aa24.17■■□□□ 1.46
PFN1-202ENST00000572383 SPON1Q9HCB6 807 aa24.17■■□□□ 1.46
PFN1-202ENST00000572383 COL24A1Q17RW2 1714 aa24.16■■□□□ 1.46
PFN1-202ENST00000572383 MTHFSDQ2M296 383 aaKnown RBP24.16■■□□□ 1.46
PFN1-202ENST00000572383 SLC27A3Q5K4L6 730 aa24.16■■□□□ 1.46
PFN1-202ENST00000572383 FCHSD2O94868 740 aa24.15■■□□□ 1.46
PFN1-202ENST00000572383 C1orf141Q5JVX7 400 aa24.15■■□□□ 1.46
PFN1-202ENST00000572383 PHACTR3Q96KR7 559 aa24.14■■□□□ 1.45
PFN1-202ENST00000572383 LRRC4BQ9NT99 713 aa24.13■■□□□ 1.45
PFN1-202ENST00000572383 C5P01031 1676 aa24.12■■□□□ 1.45
PFN1-202ENST00000572383 HSP90AB1P08238 724 aaKnown RBP24.12■■□□□ 1.45
PFN1-202ENST00000572383 AKAP4Q5JQC9 854 aa24.12■■□□□ 1.45
PFN1-202ENST00000572383 KDM6AO15550 1401 aaPredicted RBP24.11■■□□□ 1.45
PFN1-202ENST00000572383 CCDC184Q52MB2 194 aa24.11■■□□□ 1.45
PFN1-202ENST00000572383 MPRIPQ6WCQ1 1025 aa24.11■■□□□ 1.45
PFN1-202ENST00000572383 DCAF5Q96JK2 942 aa24.11■■□□□ 1.45
PFN1-202ENST00000572383 ZBTB7AO95365 584 aa24.1■■□□□ 1.45
PFN1-202ENST00000572383 ZNF827Q17R98 1081 aa24.09■■□□□ 1.45
PFN1-202ENST00000572383 GAS2L2Q8NHY3 880 aa24.09■■□□□ 1.45
PFN1-202ENST00000572383 PTGER2P43116 358 aa24.08■■□□□ 1.45
PFN1-202ENST00000572383 PLEKHF1Q96S99 279 aa24.08■■□□□ 1.45
PFN1-202ENST00000572383 WDR43Q15061 677 aaKnown RBP eCLIP24.07■■□□□ 1.44
PFN1-202ENST00000572383 PIGBQ92521 554 aa24.07■■□□□ 1.44
PFN1-202ENST00000572383 PPP1R1BQ9UD71 204 aaPredicted RBP24.07■■□□□ 1.44
PFN1-202ENST00000572383 ERVV-2B6SEH9 535 aa24.06■■□□□ 1.44
PFN1-202ENST00000572383 AKT1S1Q96B36 256 aa24.06■■□□□ 1.44
PFN1-202ENST00000572383 LGR6Q9HBX8 967 aa24.06■■□□□ 1.44
PFN1-202ENST00000572383 TMOD3Q9NYL9 352 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms