RNA–Protein interactions for RNA: ENST00000572355.5

HCFC1R1-203, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3 BASIC

Gene HCFC1R1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-203ENST00000572355 PNPLA7Q6ZV29 1317 aa22.66■■□□□ 1.22
HCFC1R1-203ENST00000572355 FBLN1P23142 703 aa22.66■■□□□ 1.22
HCFC1R1-203ENST00000572355 HOXC9P31274 260 aa22.66■■□□□ 1.22
HCFC1R1-203ENST00000572355 NSD2O96028 1365 aa22.64■■□□□ 1.22
HCFC1R1-203ENST00000572355 POLD1P28340 1107 aa22.64■■□□□ 1.21
HCFC1R1-203ENST00000572355 PRIM1P49642 420 aaKnown RBP22.64■■□□□ 1.21
HCFC1R1-203ENST00000572355 TESK2Q96S53 571 aa22.64■■□□□ 1.21
HCFC1R1-203ENST00000572355 TFCP2L1Q9NZI6 479 aa22.64■■□□□ 1.21
HCFC1R1-203ENST00000572355 ST20-MTHFSA0A0A6YYL1 179 aa22.63■■□□□ 1.21
HCFC1R1-203ENST00000572355 GPR162Q16538 588 aa22.63■■□□□ 1.21
HCFC1R1-203ENST00000572355 SLC16A10Q8TF71 515 aa22.63■■□□□ 1.21
HCFC1R1-203ENST00000572355 PELP1Q8IZL8 1130 aaKnown RBP22.62■■□□□ 1.21
HCFC1R1-203ENST00000572355 ZCRB1Q8TBF4 217 aaKnown RBP22.61■■□□□ 1.21
HCFC1R1-203ENST00000572355 RTL1A6NKG5 1358 aa22.61■■□□□ 1.21
HCFC1R1-203ENST00000572355 RRS1Q15050 365 aaKnown RBP22.59■■□□□ 1.21
HCFC1R1-203ENST00000572355 KIF20BQ96Q89 1820 aa22.59■■□□□ 1.21
HCFC1R1-203ENST00000572355 USHBP1Q8N6Y0 703 aa22.58■■□□□ 1.21
HCFC1R1-203ENST00000572355 CCNL1Q9UK58 526 aaPredicted RBP22.58■■□□□ 1.21
HCFC1R1-203ENST00000572355 SMG6Q86US8 1419 aaKnown RBP22.57■■□□□ 1.2
HCFC1R1-203ENST00000572355 C5P01031 1676 aa22.57■■□□□ 1.2
HCFC1R1-203ENST00000572355 USP47Q96K76 1375 aa22.56■■□□□ 1.2
HCFC1R1-203ENST00000572355 SENP3-EIF4A1A0A087X0R7 540 aa22.56■■□□□ 1.2
HCFC1R1-203ENST00000572355 MSH5O43196 834 aa22.56■■□□□ 1.2
HCFC1R1-203ENST00000572355 NLGN2Q8NFZ4 835 aa22.56■■□□□ 1.2
HCFC1R1-203ENST00000572355 GGNBP2Q9H3C7 697 aa22.56■■□□□ 1.2
HCFC1R1-203ENST00000572355 NBPF6Q5VWK0 638 aa22.55■■□□□ 1.2
HCFC1R1-203ENST00000572355 NBPF4Q96M43 638 aa22.55■■□□□ 1.2
HCFC1R1-203ENST00000572355 C1QTNF8P60827 252 aa22.53■■□□□ 1.2
HCFC1R1-203ENST00000572355 RAPGEF4Q8WZA2 1011 aa22.53■■□□□ 1.2
HCFC1R1-203ENST00000572355 SLC24A1O60721 1099 aa22.52■■□□□ 1.2
HCFC1R1-203ENST00000572355 FYB1O15117 783 aa22.51■■□□□ 1.19
HCFC1R1-203ENST00000572355 MSL1Q68DK7 614 aa22.51■■□□□ 1.19
HCFC1R1-203ENST00000572355 TAF1LQ8IZX4 1826 aa22.51■■□□□ 1.19
HCFC1R1-203ENST00000572355 CGNL1Q0VF96 1302 aa22.51■■□□□ 1.19
HCFC1R1-203ENST00000572355 TOGARAM1Q9Y4F4 1720 aa22.51■■□□□ 1.19
HCFC1R1-203ENST00000572355 TATP17735 454 aaPredicted RBP22.5■■□□□ 1.19
HCFC1R1-203ENST00000572355 TMF1P82094 1093 aa22.5■■□□□ 1.19
HCFC1R1-203ENST00000572355 COL23A1Q86Y22 540 aaPredicted RBP22.5■■□□□ 1.19
HCFC1R1-203ENST00000572355 PCDH11XQ9BZA7 1347 aa22.49■■□□□ 1.19
HCFC1R1-203ENST00000572355 PCDH11YQ9BZA8 1340 aa22.49■■□□□ 1.19
HCFC1R1-203ENST00000572355 INSRP06213 1382 aa22.48■■□□□ 1.19
HCFC1R1-203ENST00000572355 FLT4P35916 1363 aa22.48■■□□□ 1.19
HCFC1R1-203ENST00000572355 GIGYF1O75420 1035 aaPredicted RBP22.47■■□□□ 1.19
HCFC1R1-203ENST00000572355 HSP90AB2PQ58FF8 381 aa22.47■■□□□ 1.19
HCFC1R1-203ENST00000572355 ITGB4P16144 1822 aa22.47■■□□□ 1.19
HCFC1R1-203ENST00000572355 PALLDQ8WX93 1383 aa22.47■■□□□ 1.19
HCFC1R1-203ENST00000572355 GOLGB1Q14789 3259 aaKnown RBP22.46■■□□□ 1.19
HCFC1R1-203ENST00000572355 PKD1L3Q7Z443 1732 aa22.46■■□□□ 1.19
HCFC1R1-203ENST00000572355 YBX3P16989 372 aaKnown RBP eCLIP22.46■■□□□ 1.19
HCFC1R1-203ENST00000572355 C4BP0C0L5 1744 aa22.45■■□□□ 1.18
HCFC1R1-203ENST00000572355 MPRIPQ6WCQ1 1025 aa22.44■■□□□ 1.18
HCFC1R1-203ENST00000572355 KIF24Q5T7B8 1368 aa22.42■■□□□ 1.18
HCFC1R1-203ENST00000572355 NSD3Q9BZ95 1437 aa22.41■■□□□ 1.18
HCFC1R1-203ENST00000572355 CYP27B1O15528 508 aa22.41■■□□□ 1.18
HCFC1R1-203ENST00000572355 GRIN3BO60391 1043 aa22.41■■□□□ 1.18
HCFC1R1-203ENST00000572355 ANKRD26Q9UPS8 1709 aa22.4■■□□□ 1.18
HCFC1R1-203ENST00000572355 EMILIN1Q9Y6C2 1016 aa22.4■■□□□ 1.18
HCFC1R1-203ENST00000572355 UBR3Q6ZT12 1888 aa22.4■■□□□ 1.18
HCFC1R1-203ENST00000572355 CDCA8Q53HL2 280 aa22.39■■□□□ 1.17
HCFC1R1-203ENST00000572355 AK7Q96M32 723 aa22.39■■□□□ 1.17
HCFC1R1-203ENST00000572355 FLAD1Q8NFF5 587 aa22.38■■□□□ 1.17
HCFC1R1-203ENST00000572355 PPM1GO15355 546 aaPredicted RBP22.37■■□□□ 1.17
HCFC1R1-203ENST00000572355 PHF14O94880 888 aa22.37■■□□□ 1.17
HCFC1R1-203ENST00000572355 TRIM26Q12899 539 aaPredicted RBP22.37■■□□□ 1.17
HCFC1R1-203ENST00000572355 SMARCC1Q92922 1105 aaPredicted RBP22.36■■□□□ 1.17
HCFC1R1-203ENST00000572355 ATP10DQ9P241 1426 aa22.36■■□□□ 1.17
HCFC1R1-203ENST00000572355 NCAPD2Q15021 1401 aa22.35■■□□□ 1.17
HCFC1R1-203ENST00000572355 HMGB2P26583 209 aaKnown RBP22.35■■□□□ 1.17
HCFC1R1-203ENST00000572355 AMIGO3Q86WK7 504 aa22.35■■□□□ 1.17
HCFC1R1-203ENST00000572355 CARD14Q9BXL6 1004 aa22.35■■□□□ 1.17
HCFC1R1-203ENST00000572355 CD2APQ9Y5K6 639 aa22.35■■□□□ 1.17
HCFC1R1-203ENST00000572355 MAP2P11137 1827 aaKnown RBP22.35■■□□□ 1.17
HCFC1R1-203ENST00000572355 SMIM5Q71RC9 77 aa22.34■■□□□ 1.17
HCFC1R1-203ENST00000572355 PIGBQ92521 554 aa22.33■■□□□ 1.17
HCFC1R1-203ENST00000572355 WWC3Q9ULE0 1092 aa22.32■■□□□ 1.16
HCFC1R1-203ENST00000572355 SPG7Q9UQ90 795 aa22.32■■□□□ 1.16
HCFC1R1-203ENST00000572355 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.31■■□□□ 1.16
HCFC1R1-203ENST00000572355 IGSF1Q8N6C5 1336 aa22.3■■□□□ 1.16
HCFC1R1-203ENST00000572355 NKX1-1Q15270 411 aaPredicted RBP22.29■■□□□ 1.16
HCFC1R1-203ENST00000572355 LINC00116Q8NCU8 138 aa22.29■■□□□ 1.16
HCFC1R1-203ENST00000572355 TMOD3Q9NYL9 352 aa22.29■■□□□ 1.16
HCFC1R1-203ENST00000572355 LOC102724428A0A0B4J2F2 783 aa22.28■■□□□ 1.16
HCFC1R1-203ENST00000572355 SIK1P57059 783 aa22.28■■□□□ 1.16
HCFC1R1-203ENST00000572355 ADCY9O60503 1353 aa22.27■■□□□ 1.16
HCFC1R1-203ENST00000572355 SSFA2P28290 1259 aa22.27■■□□□ 1.16
HCFC1R1-203ENST00000572355 ZNF526Q8TF50 670 aaPredicted RBP22.27■■□□□ 1.16
HCFC1R1-203ENST00000572355 EYA1Q99502 592 aa22.27■■□□□ 1.16
HCFC1R1-203ENST00000572355 WASHC2AQ641Q2 1341 aa22.27■■□□□ 1.16
HCFC1R1-203ENST00000572355 GPBP1L1Q9HC44 474 aaPredicted RBP22.26■■□□□ 1.15
HCFC1R1-203ENST00000572355 ASAP1Q9ULH1 1129 aa22.26■■□□□ 1.15
HCFC1R1-203ENST00000572355 GNPATO15228 680 aa22.25■■□□□ 1.15
HCFC1R1-203ENST00000572355 ITPK1Q13572 414 aa22.24■■□□□ 1.15
HCFC1R1-203ENST00000572355 PHKG2P15735 406 aa22.23■■□□□ 1.15
HCFC1R1-203ENST00000572355 ATP6V1AP38606 617 aa22.23■■□□□ 1.15
HCFC1R1-203ENST00000572355 IFNL2Q8IZJ0 200 aa22.23■■□□□ 1.15
HCFC1R1-203ENST00000572355 POLR3GLQ9BT43 218 aa22.23■■□□□ 1.15
HCFC1R1-203ENST00000572355 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.23■■□□□ 1.15
HCFC1R1-203ENST00000572355 TNNT2P45379 298 aaPredicted RBP22.22■■□□□ 1.15
HCFC1R1-203ENST00000572355 POLKQ9UBT6 870 aa22.22■■□□□ 1.15
HCFC1R1-203ENST00000572355 EIF4A2Q14240 407 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms