RNA–Protein interactions for RNA: ENST00000572176.1

ATP2A3-211, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 428 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-211ENST00000572176 ANKRD26Q9UPS8 1709 aa17.94■□□□□ 0.46
ATP2A3-211ENST00000572176 NSD2O96028 1365 aa17.93■□□□□ 0.46
ATP2A3-211ENST00000572176 CARD14Q9BXL6 1004 aa17.93■□□□□ 0.46
ATP2A3-211ENST00000572176 LY75O60449 1722 aa17.92■□□□□ 0.46
ATP2A3-211ENST00000572176 ZNF827Q17R98 1081 aa17.92■□□□□ 0.46
ATP2A3-211ENST00000572176 ZCRB1Q8TBF4 217 aaKnown RBP17.92■□□□□ 0.46
ATP2A3-211ENST00000572176 LRRC4BQ9NT99 713 aa17.92■□□□□ 0.46
ATP2A3-211ENST00000572176 CGNL1Q0VF96 1302 aa17.92■□□□□ 0.46
ATP2A3-211ENST00000572176 QSER1Q2KHR3 1735 aa17.92■□□□□ 0.46
ATP2A3-211ENST00000572176 MTFR1LQ9H019 292 aa17.91■□□□□ 0.46
ATP2A3-211ENST00000572176 HSP90AB2PQ58FF8 381 aa17.9■□□□□ 0.46
ATP2A3-211ENST00000572176 SLC27A3Q5K4L6 730 aa17.9■□□□□ 0.46
ATP2A3-211ENST00000572176 USHBP1Q8N6Y0 703 aa17.9■□□□□ 0.46
ATP2A3-211ENST00000572176 SGIP1Q9BQI5 828 aa17.9■□□□□ 0.46
ATP2A3-211ENST00000572176 PCGF6Q9BYE7 350 aa17.9■□□□□ 0.46
ATP2A3-211ENST00000572176 PRIM1P49642 420 aaKnown RBP17.89■□□□□ 0.45
ATP2A3-211ENST00000572176 ATF5Q9Y2D1 282 aaPredicted RBP17.89■□□□□ 0.45
ATP2A3-211ENST00000572176 NCAPD2Q15021 1401 aa17.89■□□□□ 0.45
ATP2A3-211ENST00000572176 RAPGEF4Q8WZA2 1011 aa17.88■□□□□ 0.45
ATP2A3-211ENST00000572176 AKT1S1Q96B36 256 aa17.88■□□□□ 0.45
ATP2A3-211ENST00000572176 SYTL4Q96C24 671 aaPredicted RBP17.88■□□□□ 0.45
ATP2A3-211ENST00000572176 EMILIN1Q9Y6C2 1016 aa17.88■□□□□ 0.45
ATP2A3-211ENST00000572176 TUBGCP6Q96RT7 1819 aa17.88■□□□□ 0.45
ATP2A3-211ENST00000572176 PKD1L3Q7Z443 1732 aa17.87■□□□□ 0.45
ATP2A3-211ENST00000572176 COL24A1Q17RW2 1714 aa17.86■□□□□ 0.45
ATP2A3-211ENST00000572176 TATP17735 454 aaPredicted RBP17.85■□□□□ 0.45
ATP2A3-211ENST00000572176 PCDH11XQ9BZA7 1347 aa17.85■□□□□ 0.45
ATP2A3-211ENST00000572176 PCDH11YQ9BZA8 1340 aa17.85■□□□□ 0.45
ATP2A3-211ENST00000572176 TOGARAM1Q9Y4F4 1720 aa17.84■□□□□ 0.45
ATP2A3-211ENST00000572176 PNPLA7Q6ZV29 1317 aa17.83■□□□□ 0.44
ATP2A3-211ENST00000572176 FHDC1Q9C0D6 1143 aaPredicted RBP17.83■□□□□ 0.44
ATP2A3-211ENST00000572176 MAP2P11137 1827 aaKnown RBP17.83■□□□□ 0.44
ATP2A3-211ENST00000572176 MAP3K5Q99683 1374 aa17.82■□□□□ 0.44
ATP2A3-211ENST00000572176 WASHC2AQ641Q2 1341 aa17.82■□□□□ 0.44
ATP2A3-211ENST00000572176 KCNQ4P56696 695 aa17.82■□□□□ 0.44
ATP2A3-211ENST00000572176 SYT17Q9BSW7 474 aa17.82■□□□□ 0.44
ATP2A3-211ENST00000572176 DCAF8L1A6NGE4 600 aa17.81■□□□□ 0.44
ATP2A3-211ENST00000572176 YY1P25490 414 aa17.81■□□□□ 0.44
ATP2A3-211ENST00000572176 C5P01031 1676 aa17.8■□□□□ 0.44
ATP2A3-211ENST00000572176 UTRNP46939 3433 aa17.8■□□□□ 0.44
ATP2A3-211ENST00000572176 CYP27B1O15528 508 aa17.8■□□□□ 0.44
ATP2A3-211ENST00000572176 EIF4G2P78344 907 aaKnown RBP eCLIP17.8■□□□□ 0.44
ATP2A3-211ENST00000572176 SLC16A10Q8TF71 515 aa17.8■□□□□ 0.44
ATP2A3-211ENST00000572176 ARXQ96QS3 562 aa17.8■□□□□ 0.44
ATP2A3-211ENST00000572176 CCNL1Q9UK58 526 aaPredicted RBP17.8■□□□□ 0.44
ATP2A3-211ENST00000572176 PPM1GO15355 546 aaPredicted RBP17.79■□□□□ 0.44
ATP2A3-211ENST00000572176 HSPA5P11021 654 aaKnown RBP17.79■□□□□ 0.44
ATP2A3-211ENST00000572176 POLKQ9UBT6 870 aa17.79■□□□□ 0.44
ATP2A3-211ENST00000572176 ITGB4P16144 1822 aa17.79■□□□□ 0.44
ATP2A3-211ENST00000572176 POLR3GLQ9BT43 218 aa17.78■□□□□ 0.44
ATP2A3-211ENST00000572176 TFCP2L1Q9NZI6 479 aa17.78■□□□□ 0.44
ATP2A3-211ENST00000572176 TAF1LQ8IZX4 1826 aa17.77■□□□□ 0.44
ATP2A3-211ENST00000572176 PALLDQ8WX93 1383 aa17.77■□□□□ 0.43
ATP2A3-211ENST00000572176 EYA1Q99502 592 aa17.76■□□□□ 0.43
ATP2A3-211ENST00000572176 PLEKHG2Q9H7P9 1386 aa17.76■□□□□ 0.43
ATP2A3-211ENST00000572176 NKX1-1Q15270 411 aaPredicted RBP17.75■□□□□ 0.43
ATP2A3-211ENST00000572176 CCER1Q8TC90 406 aaPredicted RBP17.75■□□□□ 0.43
ATP2A3-211ENST00000572176 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.74■□□□□ 0.43
ATP2A3-211ENST00000572176 POLD1P28340 1107 aa17.73■□□□□ 0.43
ATP2A3-211ENST00000572176 EIF4A2Q14240 407 aaKnown RBP17.73■□□□□ 0.43
ATP2A3-211ENST00000572176 MPRIPQ6WCQ1 1025 aa17.73■□□□□ 0.43
ATP2A3-211ENST00000572176 PANK3Q9H999 370 aa17.73■□□□□ 0.43
ATP2A3-211ENST00000572176 SPG7Q9UQ90 795 aa17.73■□□□□ 0.43
ATP2A3-211ENST00000572176 C4BP0C0L5 1744 aa17.72■□□□□ 0.43
ATP2A3-211ENST00000572176 TNNT2P45379 298 aaPredicted RBP17.72■□□□□ 0.43
ATP2A3-211ENST00000572176 COL23A1Q86Y22 540 aaPredicted RBP17.71■□□□□ 0.43
ATP2A3-211ENST00000572176 SMARCC1Q92922 1105 aaPredicted RBP17.71■□□□□ 0.43
ATP2A3-211ENST00000572176 IGSF1Q8N6C5 1336 aa17.71■□□□□ 0.42
ATP2A3-211ENST00000572176 HMGB2P26583 209 aaKnown RBP17.7■□□□□ 0.42
ATP2A3-211ENST00000572176 PIGBQ92521 554 aa17.7■□□□□ 0.42
ATP2A3-211ENST00000572176 CHD4Q14839 1912 aa17.69■□□□□ 0.42
ATP2A3-211ENST00000572176 PHKG2P15735 406 aa17.69■□□□□ 0.42
ATP2A3-211ENST00000572176 UBR3Q6ZT12 1888 aa17.69■□□□□ 0.42
ATP2A3-211ENST00000572176 IFNL2Q8IZJ0 200 aa17.68■□□□□ 0.42
ATP2A3-211ENST00000572176 KLHL34Q8N239 644 aa17.66■□□□□ 0.42
ATP2A3-211ENST00000572176 FLAD1Q8NFF5 587 aa17.66■□□□□ 0.42
ATP2A3-211ENST00000572176 TMOD3Q9NYL9 352 aa17.66■□□□□ 0.42
ATP2A3-211ENST00000572176 GOLGB1Q14789 3259 aaKnown RBP17.66■□□□□ 0.42
ATP2A3-211ENST00000572176 MSH5O43196 834 aa17.65■□□□□ 0.42
ATP2A3-211ENST00000572176 AMIGO3Q86WK7 504 aa17.65■□□□□ 0.42
ATP2A3-211ENST00000572176 NLGN2Q8NFZ4 835 aa17.65■□□□□ 0.42
ATP2A3-211ENST00000572176 LOC102724428A0A0B4J2F2 783 aa17.64■□□□□ 0.41
ATP2A3-211ENST00000572176 SIK1P57059 783 aa17.64■□□□□ 0.41
ATP2A3-211ENST00000572176 MSL1Q68DK7 614 aa17.64■□□□□ 0.41
ATP2A3-211ENST00000572176 AK7Q96M32 723 aa17.64■□□□□ 0.41
ATP2A3-211ENST00000572176 KDRP35968 1356 aa17.64■□□□□ 0.41
ATP2A3-211ENST00000572176 MORC1Q86VD1 984 aa17.63■□□□□ 0.41
ATP2A3-211ENST00000572176 LINC00116Q8NCU8 138 aa17.63■□□□□ 0.41
ATP2A3-211ENST00000572176 KDM6AO15550 1401 aaPredicted RBP17.63■□□□□ 0.41
ATP2A3-211ENST00000572176 ZNF831Q5JPB2 1677 aa17.62■□□□□ 0.41
ATP2A3-211ENST00000572176 GPR162Q16538 588 aa17.62■□□□□ 0.41
ATP2A3-211ENST00000572176 ZNF784Q8NCA9 323 aaPredicted RBP17.62■□□□□ 0.41
ATP2A3-211ENST00000572176 ASAP1Q9ULH1 1129 aa17.62■□□□□ 0.41
ATP2A3-211ENST00000572176 KNSTRNQ9Y448 316 aa17.62■□□□□ 0.41
ATP2A3-211ENST00000572176 KIF7Q2M1P5 1343 aa17.62■□□□□ 0.41
ATP2A3-211ENST00000572176 AMER1Q5JTC6 1135 aaPredicted RBP17.61■□□□□ 0.41
ATP2A3-211ENST00000572176 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.6■□□□□ 0.41
ATP2A3-211ENST00000572176 HSP90AB1P08238 724 aaKnown RBP17.6■□□□□ 0.41
ATP2A3-211ENST00000572176 SSFA2P28290 1259 aa17.6■□□□□ 0.41
ATP2A3-211ENST00000572176 ITPK1Q13572 414 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms