RNA–Protein interactions for RNA: ENST00000571538.5

TRAP1-206, Transcript of TNF receptor associated protein 1, humanhuman

TSL 4

Gene TRAP1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-206ENST00000571538 IL13P35225 146 aa13.44□□□□□ -0.26
TRAP1-206ENST00000571538 PARP4Q9UKK3 1724 aaKnown RBP13.44□□□□□ -0.26
TRAP1-206ENST00000571538 TNS2Q63HR2 1409 aa13.43□□□□□ -0.26
TRAP1-206ENST00000571538 COL3A1P02461 1466 aaPredicted RBP13.42□□□□□ -0.26
TRAP1-206ENST00000571538 WNK3Q9BYP7 1800 aa13.42□□□□□ -0.26
TRAP1-206ENST00000571538 KDRP35968 1356 aa13.42□□□□□ -0.26
TRAP1-206ENST00000571538 OVOS2A0A0G2JMS6 1433 aa13.41□□□□□ -0.26
TRAP1-206ENST00000571538 USHBP1Q8N6Y0 703 aa13.41□□□□□ -0.26
TRAP1-206ENST00000571538 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.41□□□□□ -0.26
TRAP1-206ENST00000571538 LRRC37A3O60309 1634 aa13.4□□□□□ -0.26
TRAP1-206ENST00000571538 U2SURPO15042 1029 aaKnown RBP13.4□□□□□ -0.26
TRAP1-206ENST00000571538 FAM196AQ6ZSG2 479 aa13.4□□□□□ -0.26
TRAP1-206ENST00000571538 ZCRB1Q8TBF4 217 aaKnown RBP13.4□□□□□ -0.26
TRAP1-206ENST00000571538 SPG7Q9UQ90 795 aa13.4□□□□□ -0.26
TRAP1-206ENST00000571538 PCDH11XQ9BZA7 1347 aa13.39□□□□□ -0.27
TRAP1-206ENST00000571538 PCDH11YQ9BZA8 1340 aa13.39□□□□□ -0.27
TRAP1-206ENST00000571538 MEGF6O75095 1541 aa13.39□□□□□ -0.27
TRAP1-206ENST00000571538 AMOTQ4VCS5 1084 aa13.39□□□□□ -0.27
TRAP1-206ENST00000571538 SULT6B1Q6IMI4 303 aa13.39□□□□□ -0.27
TRAP1-206ENST00000571538 PNNQ9H307 717 aaKnown RBP13.39□□□□□ -0.27
TRAP1-206ENST00000571538 RGPD1P0DJD0 1748 aa13.39□□□□□ -0.27
TRAP1-206ENST00000571538 BCL9O00512 1426 aa13.39□□□□□ -0.27
TRAP1-206ENST00000571538 RGPD2P0DJD1 1756 aa13.37□□□□□ -0.27
TRAP1-206ENST00000571538 NEFMP07197 916 aa13.37□□□□□ -0.27
TRAP1-206ENST00000571538 U2AF1L5P0DN76 240 aaPredicted RBP13.37□□□□□ -0.27
TRAP1-206ENST00000571538 U2AF1Q01081 240 aaKnown RBP eCLIP13.37□□□□□ -0.27
TRAP1-206ENST00000571538 PLEKHO1Q53GL0 409 aaPredicted RBP13.37□□□□□ -0.27
TRAP1-206ENST00000571538 CCDC125Q86Z20 511 aa13.37□□□□□ -0.27
TRAP1-206ENST00000571538 FCHSD2O94868 740 aa13.36□□□□□ -0.27
TRAP1-206ENST00000571538 BRWD3Q6RI45 1802 aa13.35□□□□□ -0.27
TRAP1-206ENST00000571538 HSP90AB1P08238 724 aaKnown RBP13.35□□□□□ -0.27
TRAP1-206ENST00000571538 SF3B2Q13435 895 aaKnown RBP13.35□□□□□ -0.27
TRAP1-206ENST00000571538 WDR43Q15061 677 aaKnown RBP eCLIP13.35□□□□□ -0.27
TRAP1-206ENST00000571538 AEBP1Q8IUX7 1158 aa13.35□□□□□ -0.27
TRAP1-206ENST00000571538 MARCH10Q8NA82 808 aaPredicted RBP13.35□□□□□ -0.27
TRAP1-206ENST00000571538 DDX54Q8TDD1 881 aaKnown RBP13.35□□□□□ -0.27
TRAP1-206ENST00000571538 HMOX1P09601 288 aa13.34□□□□□ -0.27
TRAP1-206ENST00000571538 IFNL2Q8IZJ0 200 aa13.34□□□□□ -0.27
TRAP1-206ENST00000571538 PKD1L3Q7Z443 1732 aa13.33□□□□□ -0.27
TRAP1-206ENST00000571538 C1orf141Q5JVX7 400 aa13.33□□□□□ -0.28
TRAP1-206ENST00000571538 GAS2L2Q8NHY3 880 aa13.32□□□□□ -0.28
TRAP1-206ENST00000571538 RSPH6AQ9H0K4 717 aa13.32□□□□□ -0.28
TRAP1-206ENST00000571538 PRKAR2BP31323 418 aa13.31□□□□□ -0.28
TRAP1-206ENST00000571538 DIEXFQ68CQ4 756 aaKnown RBP13.31□□□□□ -0.28
TRAP1-206ENST00000571538 ZNF530Q6P9A1 599 aaPredicted RBP13.31□□□□□ -0.28
TRAP1-206ENST00000571538 EP400Q96L91 3159 aa13.3□□□□□ -0.28
TRAP1-206ENST00000571538 CYP27B1O15528 508 aa13.3□□□□□ -0.28
TRAP1-206ENST00000571538 PHKG2P15735 406 aa13.3□□□□□ -0.28
TRAP1-206ENST00000571538 NKX1-1Q15270 411 aaPredicted RBP13.3□□□□□ -0.28
TRAP1-206ENST00000571538 FAM182BQ5T319 152 aa13.3□□□□□ -0.28
TRAP1-206ENST00000571538 UPF1Q92900 1129 aaKnown RBP eCLIP13.3□□□□□ -0.28
TRAP1-206ENST00000571538 BCL11BQ9C0K0 894 aaPredicted RBP13.3□□□□□ -0.28
TRAP1-206ENST00000571538 MRS2Q9HD23 443 aa13.3□□□□□ -0.28
TRAP1-206ENST00000571538 MAPK8IP3Q9UPT6 1336 aa13.3□□□□□ -0.28
TRAP1-206ENST00000571538 AKAP4Q5JQC9 854 aa13.29□□□□□ -0.28
TRAP1-206ENST00000571538 DCAF5Q96JK2 942 aa13.29□□□□□ -0.28
TRAP1-206ENST00000571538 SHANK3Q9BYB0 1731 aa13.28□□□□□ -0.28
TRAP1-206ENST00000571538 TRIM37O94972 964 aa13.28□□□□□ -0.28
TRAP1-206ENST00000571538 BAG6P46379 1132 aa13.28□□□□□ -0.28
TRAP1-206ENST00000571538 HMGB2P26583 209 aaKnown RBP13.27□□□□□ -0.29
TRAP1-206ENST00000571538 MTHFSDQ2M296 383 aaKnown RBP13.27□□□□□ -0.29
TRAP1-206ENST00000571538 ERVV-2B6SEH9 535 aa13.26□□□□□ -0.29
TRAP1-206ENST00000571538 CCER2I3L3R5 266 aa13.26□□□□□ -0.29
TRAP1-206ENST00000571538 SYTL4Q96C24 671 aaPredicted RBP13.26□□□□□ -0.29
TRAP1-206ENST00000571538 NHSQ6T4R5 1651 aa13.25□□□□□ -0.29
TRAP1-206ENST00000571538 MAP3K5Q99683 1374 aa13.25□□□□□ -0.29
TRAP1-206ENST00000571538 GNAT3A8MTJ3 354 aa13.25□□□□□ -0.29
TRAP1-206ENST00000571538 HTATSF1O43719 755 aaKnown RBP13.25□□□□□ -0.29
TRAP1-206ENST00000571538 RTF1Q92541 710 aaKnown RBP13.25□□□□□ -0.29
TRAP1-206ENST00000571538 RUNDC1Q96C34 613 aa13.25□□□□□ -0.29
TRAP1-206ENST00000571538 ACSBG1Q96GR2 724 aa13.25□□□□□ -0.29
TRAP1-206ENST00000571538 PLEKHF1Q96S99 279 aa13.25□□□□□ -0.29
TRAP1-206ENST00000571538 PLSCR1O15162 318 aa13.24□□□□□ -0.29
TRAP1-206ENST00000571538 APBA3O96018 575 aa13.24□□□□□ -0.29
TRAP1-206ENST00000571538 PRIM1P49642 420 aaKnown RBP13.24□□□□□ -0.29
TRAP1-206ENST00000571538 LMOD3Q0VAK6 560 aa13.24□□□□□ -0.29
TRAP1-206ENST00000571538 PHACTR3Q96KR7 559 aa13.24□□□□□ -0.29
TRAP1-206ENST00000571538 TMOD3Q9NYL9 352 aa13.24□□□□□ -0.29
TRAP1-206ENST00000571538 ADAMTS8Q9UP79 889 aa13.24□□□□□ -0.29
TRAP1-206ENST00000571538 NPM3O75607 178 aaKnown RBP13.23□□□□□ -0.29
TRAP1-206ENST00000571538 NFE2L2Q16236 605 aa13.23□□□□□ -0.29
TRAP1-206ENST00000571538 PNISRQ8TF01 805 aaKnown RBP13.23□□□□□ -0.29
TRAP1-206ENST00000571538 DOT1LQ8TEK3 1739 aa13.22□□□□□ -0.29
TRAP1-206ENST00000571538 CABP4P57796 275 aa13.22□□□□□ -0.29
TRAP1-206ENST00000571538 MPRIPQ6WCQ1 1025 aa13.22□□□□□ -0.29
TRAP1-206ENST00000571538 SMARCC1Q92922 1105 aaPredicted RBP13.22□□□□□ -0.29
TRAP1-206ENST00000571538 SBF2Q86WG5 1849 aa13.22□□□□□ -0.29
TRAP1-206ENST00000571538 TNS1Q9HBL0 1735 aaKnown RBP13.22□□□□□ -0.29
TRAP1-206ENST00000571538 KDM6AO15550 1401 aaPredicted RBP13.22□□□□□ -0.29
TRAP1-206ENST00000571538 RNMTO43148 476 aaKnown RBP13.21□□□□□ -0.29
TRAP1-206ENST00000571538 KCNQ2O43526 872 aa13.21□□□□□ -0.29
TRAP1-206ENST00000571538 RGPD3A6NKT7 1758 aaPredicted RBP13.2□□□□□ -0.3
TRAP1-206ENST00000571538 RGPD4Q7Z3J3 1758 aa13.2□□□□□ -0.3
TRAP1-206ENST00000571538 TEFQ10587 303 aa13.2□□□□□ -0.3
TRAP1-206ENST00000571538 CCDC184Q52MB2 194 aa13.2□□□□□ -0.3
TRAP1-206ENST00000571538 MRC1P22897 1456 aa13.19□□□□□ -0.3
TRAP1-206ENST00000571538 CCDC146Q8IYE0 955 aa13.19□□□□□ -0.3
TRAP1-206ENST00000571538 PIGBQ92521 554 aa13.19□□□□□ -0.3
TRAP1-206ENST00000571538 SLC52A2Q9HAB3 445 aa13.19□□□□□ -0.3
TRAP1-206ENST00000571538 CEMIPQ8WUJ3 1361 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms