RNA–Protein interactions for RNA: ENST00000571309.1

PSMB6-202, Transcript of proteasome subunit beta 6, humanhuman

TSL 3

Gene PSMB6, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB6-202ENST00000571309 NSD3Q9BZ95 1437 aa19.17■□□□□ 0.66
PSMB6-202ENST00000571309 LRRC4BQ9NT99 713 aa19.17■□□□□ 0.66
PSMB6-202ENST00000571309 CGNL1Q0VF96 1302 aa19.17■□□□□ 0.66
PSMB6-202ENST00000571309 DOT1LQ8TEK3 1739 aa19.17■□□□□ 0.66
PSMB6-202ENST00000571309 HSP90AB2PQ58FF8 381 aa19.16■□□□□ 0.66
PSMB6-202ENST00000571309 FLT4P35916 1363 aa19.16■□□□□ 0.66
PSMB6-202ENST00000571309 PRIM1P49642 420 aaKnown RBP19.15■□□□□ 0.66
PSMB6-202ENST00000571309 SLC27A3Q5K4L6 730 aa19.15■□□□□ 0.66
PSMB6-202ENST00000571309 USHBP1Q8N6Y0 703 aa19.15■□□□□ 0.66
PSMB6-202ENST00000571309 MTFR1LQ9H019 292 aa19.15■□□□□ 0.66
PSMB6-202ENST00000571309 ATF5Q9Y2D1 282 aaPredicted RBP19.15■□□□□ 0.66
PSMB6-202ENST00000571309 NSD2O96028 1365 aa19.15■□□□□ 0.66
PSMB6-202ENST00000571309 ZNF827Q17R98 1081 aa19.14■□□□□ 0.65
PSMB6-202ENST00000571309 RAPGEF4Q8WZA2 1011 aa19.13■□□□□ 0.65
PSMB6-202ENST00000571309 SYTL4Q96C24 671 aaPredicted RBP19.13■□□□□ 0.65
PSMB6-202ENST00000571309 LY75O60449 1722 aa19.12■□□□□ 0.65
PSMB6-202ENST00000571309 AKT1S1Q96B36 256 aa19.12■□□□□ 0.65
PSMB6-202ENST00000571309 SGIP1Q9BQI5 828 aa19.12■□□□□ 0.65
PSMB6-202ENST00000571309 QSER1Q2KHR3 1735 aa19.11■□□□□ 0.65
PSMB6-202ENST00000571309 ANKRD26Q9UPS8 1709 aa19.11■□□□□ 0.65
PSMB6-202ENST00000571309 TATP17735 454 aaPredicted RBP19.11■□□□□ 0.65
PSMB6-202ENST00000571309 EMILIN1Q9Y6C2 1016 aa19.11■□□□□ 0.65
PSMB6-202ENST00000571309 DCAF8L1A6NGE4 600 aa19.09■□□□□ 0.65
PSMB6-202ENST00000571309 NCAPD2Q15021 1401 aa19.08■□□□□ 0.65
PSMB6-202ENST00000571309 PCDH11XQ9BZA7 1347 aa19.08■□□□□ 0.65
PSMB6-202ENST00000571309 PCDH11YQ9BZA8 1340 aa19.08■□□□□ 0.65
PSMB6-202ENST00000571309 MAP2P11137 1827 aaKnown RBP19.07■□□□□ 0.64
PSMB6-202ENST00000571309 WASHC2AQ641Q2 1341 aa19.06■□□□□ 0.64
PSMB6-202ENST00000571309 KCNQ4P56696 695 aa19.06■□□□□ 0.64
PSMB6-202ENST00000571309 FHDC1Q9C0D6 1143 aaPredicted RBP19.06■□□□□ 0.64
PSMB6-202ENST00000571309 TUBGCP6Q96RT7 1819 aa19.06■□□□□ 0.64
PSMB6-202ENST00000571309 PKD1L3Q7Z443 1732 aa19.05■□□□□ 0.64
PSMB6-202ENST00000571309 PNPLA7Q6ZV29 1317 aa19.05■□□□□ 0.64
PSMB6-202ENST00000571309 PPM1GO15355 546 aaPredicted RBP19.05■□□□□ 0.64
PSMB6-202ENST00000571309 YY1P25490 414 aa19.05■□□□□ 0.64
PSMB6-202ENST00000571309 EIF4G2P78344 907 aaKnown RBP eCLIP19.05■□□□□ 0.64
PSMB6-202ENST00000571309 SLC16A10Q8TF71 515 aa19.05■□□□□ 0.64
PSMB6-202ENST00000571309 SYT17Q9BSW7 474 aa19.05■□□□□ 0.64
PSMB6-202ENST00000571309 COL24A1Q17RW2 1714 aa19.05■□□□□ 0.64
PSMB6-202ENST00000571309 CYP27B1O15528 508 aa19.04■□□□□ 0.64
PSMB6-202ENST00000571309 HSPA5P11021 654 aaKnown RBP19.04■□□□□ 0.64
PSMB6-202ENST00000571309 ARXQ96QS3 562 aa19.04■□□□□ 0.64
PSMB6-202ENST00000571309 POLR3GLQ9BT43 218 aa19.04■□□□□ 0.64
PSMB6-202ENST00000571309 POLKQ9UBT6 870 aa19.04■□□□□ 0.64
PSMB6-202ENST00000571309 CCNL1Q9UK58 526 aaPredicted RBP19.04■□□□□ 0.64
PSMB6-202ENST00000571309 TFCP2L1Q9NZI6 479 aa19.03■□□□□ 0.64
PSMB6-202ENST00000571309 MAP3K5Q99683 1374 aa19.03■□□□□ 0.64
PSMB6-202ENST00000571309 CCER1Q8TC90 406 aaPredicted RBP19.02■□□□□ 0.64
PSMB6-202ENST00000571309 TOGARAM1Q9Y4F4 1720 aa19.02■□□□□ 0.63
PSMB6-202ENST00000571309 EYA1Q99502 592 aa19.01■□□□□ 0.63
PSMB6-202ENST00000571309 ITGB4P16144 1822 aa19■□□□□ 0.63
PSMB6-202ENST00000571309 NKX1-1Q15270 411 aaPredicted RBP19■□□□□ 0.63
PSMB6-202ENST00000571309 MPRIPQ6WCQ1 1025 aa18.99■□□□□ 0.63
PSMB6-202ENST00000571309 PANK3Q9H999 370 aa18.99■□□□□ 0.63
PSMB6-202ENST00000571309 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.99■□□□□ 0.63
PSMB6-202ENST00000571309 SPG7Q9UQ90 795 aa18.99■□□□□ 0.63
PSMB6-202ENST00000571309 C5P01031 1676 aa18.98■□□□□ 0.63
PSMB6-202ENST00000571309 PALLDQ8WX93 1383 aa18.98■□□□□ 0.63
PSMB6-202ENST00000571309 HMGB2P26583 209 aaKnown RBP18.97■□□□□ 0.63
PSMB6-202ENST00000571309 POLD1P28340 1107 aa18.97■□□□□ 0.63
PSMB6-202ENST00000571309 TAF1LQ8IZX4 1826 aa18.97■□□□□ 0.63
PSMB6-202ENST00000571309 TNNT2P45379 298 aaPredicted RBP18.96■□□□□ 0.63
PSMB6-202ENST00000571309 EIF4A2Q14240 407 aaKnown RBP18.96■□□□□ 0.63
PSMB6-202ENST00000571309 SMARCC1Q92922 1105 aaPredicted RBP18.96■□□□□ 0.63
PSMB6-202ENST00000571309 PLEKHG2Q9H7P9 1386 aa18.95■□□□□ 0.62
PSMB6-202ENST00000571309 COL23A1Q86Y22 540 aaPredicted RBP18.95■□□□□ 0.62
PSMB6-202ENST00000571309 PIGBQ92521 554 aa18.95■□□□□ 0.62
PSMB6-202ENST00000571309 UTRNP46939 3433 aa18.93■□□□□ 0.62
PSMB6-202ENST00000571309 PHKG2P15735 406 aa18.92■□□□□ 0.62
PSMB6-202ENST00000571309 IFNL2Q8IZJ0 200 aa18.92■□□□□ 0.62
PSMB6-202ENST00000571309 IGSF1Q8N6C5 1336 aa18.92■□□□□ 0.62
PSMB6-202ENST00000571309 C4BP0C0L5 1744 aa18.91■□□□□ 0.62
PSMB6-202ENST00000571309 MSH5O43196 834 aa18.91■□□□□ 0.62
PSMB6-202ENST00000571309 FLAD1Q8NFF5 587 aa18.91■□□□□ 0.62
PSMB6-202ENST00000571309 TMOD3Q9NYL9 352 aa18.9■□□□□ 0.62
PSMB6-202ENST00000571309 CHD4Q14839 1912 aa18.9■□□□□ 0.62
PSMB6-202ENST00000571309 KLHL34Q8N239 644 aa18.89■□□□□ 0.61
PSMB6-202ENST00000571309 MORC1Q86VD1 984 aa18.88■□□□□ 0.61
PSMB6-202ENST00000571309 UBR3Q6ZT12 1888 aa18.88■□□□□ 0.61
PSMB6-202ENST00000571309 LOC102724428A0A0B4J2F2 783 aa18.87■□□□□ 0.61
PSMB6-202ENST00000571309 SIK1P57059 783 aa18.87■□□□□ 0.61
PSMB6-202ENST00000571309 MSL1Q68DK7 614 aa18.87■□□□□ 0.61
PSMB6-202ENST00000571309 AK7Q96M32 723 aa18.87■□□□□ 0.61
PSMB6-202ENST00000571309 ASAP1Q9ULH1 1129 aa18.87■□□□□ 0.61
PSMB6-202ENST00000571309 KNSTRNQ9Y448 316 aa18.87■□□□□ 0.61
PSMB6-202ENST00000571309 GPR162Q16538 588 aa18.86■□□□□ 0.61
PSMB6-202ENST00000571309 AMIGO3Q86WK7 504 aa18.86■□□□□ 0.61
PSMB6-202ENST00000571309 NLGN2Q8NFZ4 835 aa18.86■□□□□ 0.61
PSMB6-202ENST00000571309 LINC00116Q8NCU8 138 aa18.85■□□□□ 0.61
PSMB6-202ENST00000571309 ATG3Q9NT62 314 aa18.85■□□□□ 0.61
PSMB6-202ENST00000571309 ERVV-2B6SEH9 535 aa18.84■□□□□ 0.61
PSMB6-202ENST00000571309 PLEKHO1Q53GL0 409 aaPredicted RBP18.84■□□□□ 0.61
PSMB6-202ENST00000571309 ZNF784Q8NCA9 323 aaPredicted RBP18.84■□□□□ 0.61
PSMB6-202ENST00000571309 KIF7Q2M1P5 1343 aa18.83■□□□□ 0.61
PSMB6-202ENST00000571309 HSP90AB1P08238 724 aaKnown RBP18.83■□□□□ 0.6
PSMB6-202ENST00000571309 ITPK1Q13572 414 aa18.83■□□□□ 0.6
PSMB6-202ENST00000571309 AMOTQ4VCS5 1084 aa18.83■□□□□ 0.6
PSMB6-202ENST00000571309 AMER1Q5JTC6 1135 aaPredicted RBP18.83■□□□□ 0.6
PSMB6-202ENST00000571309 DCAF5Q96JK2 942 aa18.83■□□□□ 0.6
PSMB6-202ENST00000571309 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms