RNA–Protein interactions for RNA: ENST00000570827.6

USP43-203, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 2

Gene USP43, Length 3,624 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-203ENST00000570827 MAP7D2Q96T17 732 aa12.05□□□□□ -0.48
USP43-203ENST00000570827 LMBRD1Q9NUN5 540 aa12.05□□□□□ -0.48
USP43-203ENST00000570827 TMEM63CQ9P1W3 806 aa12.05□□□□□ -0.48
USP43-203ENST00000570827 ZKSCAN5Q9Y2L8 839 aa12.05□□□□□ -0.48
USP43-203ENST00000570827 FOSBP53539 338 aa12.05□□□□□ -0.48
USP43-203ENST00000570827 MRPL50Q8N5N7 158 aaKnown RBP12.05□□□□□ -0.48
USP43-203ENST00000570827 TMX3Q96JJ7 454 aa12.05□□□□□ -0.48
USP43-203ENST00000570827 HCLS1P14317 486 aaPredicted RBP12.04□□□□□ -0.48
USP43-203ENST00000570827 TSPYL4Q9UJ04 414 aa12.04□□□□□ -0.48
USP43-203ENST00000570827 RNF17Q9BXT8 1623 aaKnown RBP12.04□□□□□ -0.48
USP43-203ENST00000570827 NPHP1O15259 732 aa12.04□□□□□ -0.48
USP43-203ENST00000570827 NSFL1CQ9UNZ2 370 aaKnown RBP12.04□□□□□ -0.48
USP43-203ENST00000570827 SMC3Q9UQE7 1217 aa12.04□□□□□ -0.48
USP43-203ENST00000570827 ZNF330Q9Y3S2 320 aaPredicted RBP12.04□□□□□ -0.48
USP43-203ENST00000570827 SYNMO15061 1565 aa12.03□□□□□ -0.48
USP43-203ENST00000570827 SASS6Q6UVJ0 657 aa12.03□□□□□ -0.48
USP43-203ENST00000570827 LRSAM1Q6UWE0 723 aa12.03□□□□□ -0.48
USP43-203ENST00000570827 USP26Q9BXU7 913 aa12.03□□□□□ -0.48
USP43-203ENST00000570827 FOXO3O43524 673 aa12.03□□□□□ -0.48
USP43-203ENST00000570827 HAP1P54257 671 aaPredicted RBP12.03□□□□□ -0.48
USP43-203ENST00000570827 ZNF771Q7L3S4 317 aaPredicted RBP12.03□□□□□ -0.48
USP43-203ENST00000570827 NUTM1Q86Y26 1132 aa12.03□□□□□ -0.48
USP43-203ENST00000570827 IFT57Q9NWB7 429 aa12.03□□□□□ -0.48
USP43-203ENST00000570827 CLTCL1P53675 1640 aa12.03□□□□□ -0.48
USP43-203ENST00000570827 FERMT3Q86UX7 667 aa12.03□□□□□ -0.48
USP43-203ENST00000570827 GPT2Q8TD30 523 aa12.03□□□□□ -0.48
USP43-203ENST00000570827 MAPK8IP2Q13387 824 aaPredicted RBP12.02□□□□□ -0.48
USP43-203ENST00000570827 PTPRTO14522 1441 aa12.02□□□□□ -0.49
USP43-203ENST00000570827 ABCC11Q96J66 1382 aa12.02□□□□□ -0.49
USP43-203ENST00000570827 CAMK4Q16566 473 aa12.01□□□□□ -0.49
USP43-203ENST00000570827 SIRT2Q8IXJ6 389 aa12.01□□□□□ -0.49
USP43-203ENST00000570827 NOL7Q9UMY1 257 aaKnown RBP12.01□□□□□ -0.49
USP43-203ENST00000570827 ERVK-7P63135 1459 aa12.01□□□□□ -0.49
USP43-203ENST00000570827 SURF6O75683 361 aaKnown RBP12.01□□□□□ -0.49
USP43-203ENST00000570827 HSP90AB2PQ58FF8 381 aa12.01□□□□□ -0.49
USP43-203ENST00000570827 KIF2CQ99661 725 aa12.01□□□□□ -0.49
USP43-203ENST00000570827 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.01□□□□□ -0.49
USP43-203ENST00000570827 ADCY5O95622 1261 aa12.01□□□□□ -0.49
USP43-203ENST00000570827 ANXA1P04083 346 aa12.01□□□□□ -0.49
USP43-203ENST00000570827 GIMAP6Q6P9H5 292 aa12□□□□□ -0.49
USP43-203ENST00000570827 PPP1R9BQ96SB3 815 aa12□□□□□ -0.49
USP43-203ENST00000570827 GADD45BO75293 160 aaPredicted RBP12□□□□□ -0.49
USP43-203ENST00000570827 NLRP6P59044 892 aa12□□□□□ -0.49
USP43-203ENST00000570827 ZNF518AQ6AHZ1 1483 aa12□□□□□ -0.49
USP43-203ENST00000570827 PPP4R3BQ5MIZ7 849 aa11.99□□□□□ -0.49
USP43-203ENST00000570827 NUDT16Q96DE0 195 aaKnown RBP11.99□□□□□ -0.49
USP43-203ENST00000570827 TRPM2O94759 1503 aa11.99□□□□□ -0.49
USP43-203ENST00000570827 MADDQ8WXG6 1647 aa11.99□□□□□ -0.49
USP43-203ENST00000570827 USP48Q86UV5 1035 aa11.99□□□□□ -0.49
USP43-203ENST00000570827 RPAP2Q8IXW5 612 aaPredicted RBP11.99□□□□□ -0.49
USP43-203ENST00000570827 CNPY2Q9Y2B0 182 aa11.99□□□□□ -0.49
USP43-203ENST00000570827 A0A1W2PP64 1363 aa11.99□□□□□ -0.49
USP43-203ENST00000570827 GOLGA6L6A8MZA4 724 aa11.99□□□□□ -0.49
USP43-203ENST00000570827 CWC27Q6UX04 472 aaKnown RBP11.99□□□□□ -0.49
USP43-203ENST00000570827 DIAPH3Q9NSV4 1193 aa11.99□□□□□ -0.49
USP43-203ENST00000570827 POLKQ9UBT6 870 aa11.99□□□□□ -0.49
USP43-203ENST00000570827 KIF3AQ9Y496 699 aa11.99□□□□□ -0.49
USP43-203ENST00000570827 PPIP5K1Q6PFW1 1433 aa11.98□□□□□ -0.49
USP43-203ENST00000570827 IQGAP1P46940 1657 aa11.98□□□□□ -0.49
USP43-203ENST00000570827 ZNF445P59923 1031 aa11.98□□□□□ -0.49
USP43-203ENST00000570827 CEBPZQ03701 1054 aaKnown RBP11.98□□□□□ -0.49
USP43-203ENST00000570827 ZRSR1Q15695 479 aaKnown RBP11.98□□□□□ -0.49
USP43-203ENST00000570827 LRRCC1Q9C099 1032 aa11.98□□□□□ -0.49
USP43-203ENST00000570827 NPATQ14207 1427 aa11.98□□□□□ -0.49
USP43-203ENST00000570827 DCTPP1Q9H773 170 aa11.98□□□□□ -0.49
USP43-203ENST00000570827 GNAI2P04899 355 aa11.98□□□□□ -0.49
USP43-203ENST00000570827 CPA1P15085 419 aa11.98□□□□□ -0.49
USP43-203ENST00000570827 PLEKHF1Q96S99 279 aa11.98□□□□□ -0.49
USP43-203ENST00000570827 NLRP1Q9C000 1473 aa11.98□□□□□ -0.49
USP43-203ENST00000570827 ANKRD36BQ8N2N9 1353 aa11.97□□□□□ -0.49
USP43-203ENST00000570827 DYNC1I1O14576 645 aa11.97□□□□□ -0.49
USP43-203ENST00000570827 CCDC83Q8IWF9 413 aa11.97□□□□□ -0.49
USP43-203ENST00000570827 BICD2Q8TD16 824 aa11.97□□□□□ -0.49
USP43-203ENST00000570827 TRIM5Q9C035 493 aa11.97□□□□□ -0.49
USP43-203ENST00000570827 SPG7Q9UQ90 795 aa11.97□□□□□ -0.49
USP43-203ENST00000570827 WDR33Q9C0J8 1336 aaKnown RBP11.97□□□□□ -0.49
USP43-203ENST00000570827 AIMP1Q12904 312 aaKnown RBP11.97□□□□□ -0.49
USP43-203ENST00000570827 STK3Q13188 491 aa11.97□□□□□ -0.49
USP43-203ENST00000570827 NOLC1Q14978 699 aaKnown RBP eCLIP11.97□□□□□ -0.49
USP43-203ENST00000570827 MTERF4Q7Z6M4 381 aaKnown RBP11.97□□□□□ -0.49
USP43-203ENST00000570827 IL16Q14005 1332 aa11.97□□□□□ -0.49
USP43-203ENST00000570827 HSP90B1P14625 803 aaKnown RBP11.96□□□□□ -0.49
USP43-203ENST00000570827 MX1P20591 662 aa11.96□□□□□ -0.49
USP43-203ENST00000570827 PDE1AP54750 535 aa11.96□□□□□ -0.49
USP43-203ENST00000570827 CEP85Q6P2H3 762 aa11.96□□□□□ -0.49
USP43-203ENST00000570827 CKAP2LQ8IYA6 745 aa11.96□□□□□ -0.49
USP43-203ENST00000570827 PDCL2Q8N4E4 241 aa11.96□□□□□ -0.49
USP43-203ENST00000570827 SPHKAPQ2M3C7 1700 aa11.96□□□□□ -0.49
USP43-203ENST00000570827 ANKRD44Q8N8A2 993 aa11.96□□□□□ -0.5
USP43-203ENST00000570827 HMGN5P82970 282 aaKnown RBP11.96□□□□□ -0.5
USP43-203ENST00000570827 PALD1Q9ULE6 856 aa11.96□□□□□ -0.5
USP43-203ENST00000570827 ATP6V1DQ9Y5K8 247 aa11.96□□□□□ -0.5
USP43-203ENST00000570827 UBTFL1P0CB47 393 aaPredicted RBP11.95□□□□□ -0.5
USP43-203ENST00000570827 C16orf45Q96MC5 204 aaPredicted RBP11.95□□□□□ -0.5
USP43-203ENST00000570827 PHF23Q9BUL5 403 aaPredicted RBP11.95□□□□□ -0.5
USP43-203ENST00000570827 MCM2P49736 904 aa11.95□□□□□ -0.5
USP43-203ENST00000570827 PPFIA3O75145 1194 aa11.94□□□□□ -0.5
USP43-203ENST00000570827 TCEANC2Q96MN5 208 aa11.94□□□□□ -0.5
USP43-203ENST00000570827 G2E3Q7L622 706 aa11.94□□□□□ -0.5
USP43-203ENST00000570827 CASTP20810 708 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms