RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 RGPD4Q7Z3J3 1758 aa7.45□□□□□ -1.22
CHD3-212ENST00000570758 WASHC2AQ641Q2 1341 aa7.45□□□□□ -1.22
CHD3-212ENST00000570758 LRP5O75197 1615 aa7.45□□□□□ -1.22
CHD3-212ENST00000570758 NCAPD2Q15021 1401 aa7.44□□□□□ -1.22
CHD3-212ENST00000570758 TATP17735 454 aaPredicted RBP7.44□□□□□ -1.22
CHD3-212ENST00000570758 TXNRD1Q16881 649 aa7.44□□□□□ -1.22
CHD3-212ENST00000570758 NBPF14Q5TI25 921 aa7.44□□□□□ -1.22
CHD3-212ENST00000570758 RAPGEF4Q8WZA2 1011 aa7.44□□□□□ -1.22
CHD3-212ENST00000570758 EYA1Q99502 592 aa7.44□□□□□ -1.22
CHD3-212ENST00000570758 BTAF1O14981 1849 aa7.43□□□□□ -1.22
CHD3-212ENST00000570758 MAP2P11137 1827 aaKnown RBP7.43□□□□□ -1.22
CHD3-212ENST00000570758 PRIM1P49642 420 aaKnown RBP7.43□□□□□ -1.22
CHD3-212ENST00000570758 EIF4A2Q14240 407 aaKnown RBP7.43□□□□□ -1.22
CHD3-212ENST00000570758 AMER1Q5JTC6 1135 aaPredicted RBP7.43□□□□□ -1.22
CHD3-212ENST00000570758 NSD2O96028 1365 aa7.43□□□□□ -1.22
CHD3-212ENST00000570758 DOT1LQ8TEK3 1739 aa7.42□□□□□ -1.22
CHD3-212ENST00000570758 MORC1Q86VD1 984 aa7.42□□□□□ -1.22
CHD3-212ENST00000570758 PDGFDQ9GZP0 370 aaPredicted RBP7.42□□□□□ -1.22
CHD3-212ENST00000570758 KNSTRNQ9Y448 316 aa7.42□□□□□ -1.22
CHD3-212ENST00000570758 CYP27B1O15528 508 aa7.41□□□□□ -1.22
CHD3-212ENST00000570758 PER1O15534 1290 aaPredicted RBP7.41□□□□□ -1.22
CHD3-212ENST00000570758 SYTL4Q96C24 671 aaPredicted RBP7.41□□□□□ -1.22
CHD3-212ENST00000570758 LRRC4BQ9NT99 713 aa7.41□□□□□ -1.22
CHD3-212ENST00000570758 KCNQ4P56696 695 aa7.4□□□□□ -1.22
CHD3-212ENST00000570758 SLC15A2Q16348 729 aa7.4□□□□□ -1.22
CHD3-212ENST00000570758 STK32BQ9NY57 414 aa7.4□□□□□ -1.22
CHD3-212ENST00000570758 PCDH11XQ9BZA7 1347 aa7.4□□□□□ -1.22
CHD3-212ENST00000570758 PCDH11YQ9BZA8 1340 aa7.4□□□□□ -1.22
CHD3-212ENST00000570758 PAPPAQ13219 1627 aa7.4□□□□□ -1.22
CHD3-212ENST00000570758 PKD1L3Q7Z443 1732 aa7.4□□□□□ -1.23
CHD3-212ENST00000570758 CASZ1Q86V15 1759 aa7.4□□□□□ -1.23
CHD3-212ENST00000570758 KAT6BQ8WYB5 2073 aa7.4□□□□□ -1.23
CHD3-212ENST00000570758 TOGARAM1Q9Y4F4 1720 aa7.39□□□□□ -1.23
CHD3-212ENST00000570758 IGSF1Q8N6C5 1336 aa7.39□□□□□ -1.23
CHD3-212ENST00000570758 ZNF827Q17R98 1081 aa7.39□□□□□ -1.23
CHD3-212ENST00000570758 ZBTB7AO95365 584 aa7.38□□□□□ -1.23
CHD3-212ENST00000570758 IL13P35225 146 aa7.38□□□□□ -1.23
CHD3-212ENST00000570758 NKX1-1Q15270 411 aaPredicted RBP7.38□□□□□ -1.23
CHD3-212ENST00000570758 SLC27A3Q5K4L6 730 aa7.38□□□□□ -1.23
CHD3-212ENST00000570758 CC2D1BQ5T0F9 858 aaKnown RBP7.38□□□□□ -1.23
CHD3-212ENST00000570758 AEBP1Q8IUX7 1158 aa7.38□□□□□ -1.23
CHD3-212ENST00000570758 AKT1S1Q96B36 256 aa7.38□□□□□ -1.23
CHD3-212ENST00000570758 SPON1Q9HCB6 807 aa7.38□□□□□ -1.23
CHD3-212ENST00000570758 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.38□□□□□ -1.23
CHD3-212ENST00000570758 SPG7Q9UQ90 795 aa7.38□□□□□ -1.23
CHD3-212ENST00000570758 LY75O60449 1722 aa7.38□□□□□ -1.23
CHD3-212ENST00000570758 PHKG2P15735 406 aa7.37□□□□□ -1.23
CHD3-212ENST00000570758 MTHFSP49914 203 aa7.37□□□□□ -1.23
CHD3-212ENST00000570758 CNGB1Q14028 1251 aaPredicted RBP7.37□□□□□ -1.23
CHD3-212ENST00000570758 MPRIPQ6WCQ1 1025 aa7.37□□□□□ -1.23
CHD3-212ENST00000570758 PIGBQ92521 554 aa7.37□□□□□ -1.23
CHD3-212ENST00000570758 ATF5Q9Y2D1 282 aaPredicted RBP7.37□□□□□ -1.23
CHD3-212ENST00000570758 NPC1L1Q9UHC9 1359 aa7.36□□□□□ -1.23
CHD3-212ENST00000570758 PTGER2P43116 358 aa7.36□□□□□ -1.23
CHD3-212ENST00000570758 SULT6B1Q6IMI4 303 aa7.36□□□□□ -1.23
CHD3-212ENST00000570758 IFNL2Q8IZJ0 200 aa7.36□□□□□ -1.23
CHD3-212ENST00000570758 CCNL1Q9UK58 526 aaPredicted RBP7.36□□□□□ -1.23
CHD3-212ENST00000570758 ITGB4P16144 1822 aa7.36□□□□□ -1.23
CHD3-212ENST00000570758 PALLDQ8WX93 1383 aa7.35□□□□□ -1.23
CHD3-212ENST00000570758 PNPLA7Q6ZV29 1317 aa7.35□□□□□ -1.23
CHD3-212ENST00000570758 PLEKHO1Q53GL0 409 aaPredicted RBP7.35□□□□□ -1.23
CHD3-212ENST00000570758 SGIP1Q9BQI5 828 aa7.35□□□□□ -1.23
CHD3-212ENST00000570758 TUBGCP6Q96RT7 1819 aa7.35□□□□□ -1.23
CHD3-212ENST00000570758 KDRP35968 1356 aa7.34□□□□□ -1.23
CHD3-212ENST00000570758 PLEKHG2Q9H7P9 1386 aa7.34□□□□□ -1.23
CHD3-212ENST00000570758 ZNF530Q6P9A1 599 aaPredicted RBP7.34□□□□□ -1.23
CHD3-212ENST00000570758 MTFR1LQ9H019 292 aa7.34□□□□□ -1.23
CHD3-212ENST00000570758 ATG3Q9NT62 314 aa7.34□□□□□ -1.23
CHD3-212ENST00000570758 TFCP2L1Q9NZI6 479 aa7.34□□□□□ -1.23
CHD3-212ENST00000570758 PPP1R1BQ9UD71 204 aaPredicted RBP7.34□□□□□ -1.23
CHD3-212ENST00000570758 ASAP1Q9ULH1 1129 aa7.34□□□□□ -1.23
CHD3-212ENST00000570758 KDM6AO15550 1401 aaPredicted RBP7.34□□□□□ -1.23
CHD3-212ENST00000570758 QSER1Q2KHR3 1735 aa7.33□□□□□ -1.24
CHD3-212ENST00000570758 COL3A1P02461 1466 aaPredicted RBP7.33□□□□□ -1.24
CHD3-212ENST00000570758 DIAPH1O60610 1272 aaKnown RBP7.33□□□□□ -1.24
CHD3-212ENST00000570758 HMOX1P09601 288 aa7.33□□□□□ -1.24
CHD3-212ENST00000570758 AMOTQ4VCS5 1084 aa7.33□□□□□ -1.24
CHD3-212ENST00000570758 SMIM5Q71RC9 77 aa7.33□□□□□ -1.24
CHD3-212ENST00000570758 COL23A1Q86Y22 540 aaPredicted RBP7.33□□□□□ -1.24
CHD3-212ENST00000570758 SMARCC1Q92922 1105 aaPredicted RBP7.33□□□□□ -1.24
CHD3-212ENST00000570758 TMOD3Q9NYL9 352 aa7.33□□□□□ -1.24
CHD3-212ENST00000570758 SRCAPQ6ZRS2 3230 aa7.33□□□□□ -1.24
CHD3-212ENST00000570758 C5P01031 1676 aa7.32□□□□□ -1.24
CHD3-212ENST00000570758 LOC102724428A0A0B4J2F2 783 aa7.32□□□□□ -1.24
CHD3-212ENST00000570758 ERVV-2B6SEH9 535 aa7.32□□□□□ -1.24
CHD3-212ENST00000570758 HSP90AB1P08238 724 aaKnown RBP7.32□□□□□ -1.24
CHD3-212ENST00000570758 SIK1P57059 783 aa7.32□□□□□ -1.24
CHD3-212ENST00000570758 ITPK1Q13572 414 aa7.32□□□□□ -1.24
CHD3-212ENST00000570758 AMIGO3Q86WK7 504 aa7.32□□□□□ -1.24
CHD3-212ENST00000570758 LINC00116Q8NCU8 138 aa7.32□□□□□ -1.24
CHD3-212ENST00000570758 DCAF5Q96JK2 942 aa7.32□□□□□ -1.24
CHD3-212ENST00000570758 TAF1LQ8IZX4 1826 aa7.31□□□□□ -1.24
CHD3-212ENST00000570758 MSH5O43196 834 aa7.31□□□□□ -1.24
CHD3-212ENST00000570758 C1orf141Q5JVX7 400 aa7.31□□□□□ -1.24
CHD3-212ENST00000570758 SLC16A10Q8TF71 515 aa7.31□□□□□ -1.24
CHD3-212ENST00000570758 SLC4A9Q96Q91 983 aa7.31□□□□□ -1.24
CHD3-212ENST00000570758 ARXQ96QS3 562 aa7.31□□□□□ -1.24
CHD3-212ENST00000570758 FHDC1Q9C0D6 1143 aaPredicted RBP7.31□□□□□ -1.24
CHD3-212ENST00000570758 C4BP0C0L5 1744 aa7.3□□□□□ -1.24
CHD3-212ENST00000570758 COL24A1Q17RW2 1714 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms