RNA–Protein interactions for RNA: ENST00000570514.5

TRAP1-204, Transcript of TNF receptor associated protein 1, humanhuman

TSL 2

Gene TRAP1, Length 412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-204ENST00000570514 C1orf141Q5JVX7 400 aa12.72□□□□□ -0.37
TRAP1-204ENST00000570514 IFT57Q9NWB7 429 aa12.72□□□□□ -0.37
TRAP1-204ENST00000570514 BTG4Q9NY30 223 aa12.72□□□□□ -0.37
TRAP1-204ENST00000570514 TRIM35Q9UPQ4 493 aa12.72□□□□□ -0.37
TRAP1-204ENST00000570514 SLIT2O94813 1529 aa12.72□□□□□ -0.37
TRAP1-204ENST00000570514 RGPD5Q99666 1765 aa12.71□□□□□ -0.37
TRAP1-204ENST00000570514 PARP4Q9UKK3 1724 aaKnown RBP12.71□□□□□ -0.37
TRAP1-204ENST00000570514 SOS1Q07889 1333 aaPredicted RBP12.7□□□□□ -0.38
TRAP1-204ENST00000570514 IL2RBP14784 551 aa12.7□□□□□ -0.38
TRAP1-204ENST00000570514 HSPA1LP34931 641 aa12.7□□□□□ -0.38
TRAP1-204ENST00000570514 MTHFSDQ2M296 383 aaKnown RBP12.7□□□□□ -0.38
TRAP1-204ENST00000570514 CFAP44Q96MT7 982 aa12.7□□□□□ -0.38
TRAP1-204ENST00000570514 RRP7AQ9Y3A4 280 aaKnown RBP12.7□□□□□ -0.38
TRAP1-204ENST00000570514 SALL2Q9Y467 1007 aaPredicted RBP12.7□□□□□ -0.38
TRAP1-204ENST00000570514 PLCH1Q4KWH8 1693 aa12.7□□□□□ -0.38
TRAP1-204ENST00000570514 PCDH11XQ9BZA7 1347 aa12.69□□□□□ -0.38
TRAP1-204ENST00000570514 PCDH11YQ9BZA8 1340 aa12.69□□□□□ -0.38
TRAP1-204ENST00000570514 DUSP27Q5VZP5 1158 aa12.69□□□□□ -0.38
TRAP1-204ENST00000570514 FNBP4Q8N3X1 1017 aaPredicted RBP12.69□□□□□ -0.38
TRAP1-204ENST00000570514 PKD1L3Q7Z443 1732 aa12.68□□□□□ -0.38
TRAP1-204ENST00000570514 ADAMTS2O95450 1211 aa12.68□□□□□ -0.38
TRAP1-204ENST00000570514 ZNF530Q6P9A1 599 aaPredicted RBP12.68□□□□□ -0.38
TRAP1-204ENST00000570514 UNC5CLQ8IV45 518 aa12.68□□□□□ -0.38
TRAP1-204ENST00000570514 IFNL2Q8IZJ0 200 aa12.68□□□□□ -0.38
TRAP1-204ENST00000570514 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.68□□□□□ -0.38
TRAP1-204ENST00000570514 CEMIPQ8WUJ3 1361 aa12.68□□□□□ -0.38
TRAP1-204ENST00000570514 LARP1Q6PKG0 1096 aaKnown RBP12.67□□□□□ -0.38
TRAP1-204ENST00000570514 USHBP1Q8N6Y0 703 aa12.67□□□□□ -0.38
TRAP1-204ENST00000570514 STRN4Q9NRL3 753 aa12.67□□□□□ -0.38
TRAP1-204ENST00000570514 NRAPQ86VF7 1730 aa12.67□□□□□ -0.38
TRAP1-204ENST00000570514 NUTM2BA6NNL0 878 aaPredicted RBP12.66□□□□□ -0.38
TRAP1-204ENST00000570514 NUTM2EB1AL46 878 aaPredicted RBP12.66□□□□□ -0.38
TRAP1-204ENST00000570514 ZNF853P0CG23 659 aa12.66□□□□□ -0.38
TRAP1-204ENST00000570514 BARGINQ6ZT62 677 aa12.66□□□□□ -0.38
TRAP1-204ENST00000570514 NUTM2AQ8IVF1 878 aaPredicted RBP12.66□□□□□ -0.38
TRAP1-204ENST00000570514 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.66□□□□□ -0.38
TRAP1-204ENST00000570514 ZCRB1Q8TBF4 217 aaKnown RBP12.66□□□□□ -0.38
TRAP1-204ENST00000570514 NGLY1Q96IV0 654 aa12.66□□□□□ -0.38
TRAP1-204ENST00000570514 DCAF5Q96JK2 942 aa12.66□□□□□ -0.38
TRAP1-204ENST00000570514 DLG5Q8TDM6 1919 aa12.66□□□□□ -0.38
TRAP1-204ENST00000570514 RGPD2P0DJD1 1756 aa12.66□□□□□ -0.38
TRAP1-204ENST00000570514 LRRC37A3O60309 1634 aa12.66□□□□□ -0.38
TRAP1-204ENST00000570514 NEFLP07196 543 aa12.65□□□□□ -0.38
TRAP1-204ENST00000570514 VPS72Q15906 364 aa12.65□□□□□ -0.38
TRAP1-204ENST00000570514 MEX3CQ5U5Q3 659 aaKnown RBP12.65□□□□□ -0.38
TRAP1-204ENST00000570514 FBXO41Q8TF61 875 aa12.65□□□□□ -0.38
TRAP1-204ENST00000570514 CDCA7LQ96GN5 454 aa12.65□□□□□ -0.38
TRAP1-204ENST00000570514 RCAN3Q9UKA8 241 aa12.65□□□□□ -0.38
TRAP1-204ENST00000570514 MEGF6O75095 1541 aa12.65□□□□□ -0.38
TRAP1-204ENST00000570514 SPATA31A1Q5TZJ5 1347 aa12.64□□□□□ -0.39
TRAP1-204ENST00000570514 SPATA31A5Q5VU36 1347 aa12.64□□□□□ -0.39
TRAP1-204ENST00000570514 SPATA31A7Q8IWB4 1347 aa12.64□□□□□ -0.39
TRAP1-204ENST00000570514 FANCIQ9NVI1 1328 aa12.64□□□□□ -0.39
TRAP1-204ENST00000570514 ADAMTS7Q9UKP4 1686 aa12.64□□□□□ -0.39
TRAP1-204ENST00000570514 DISP2A7MBM2 1401 aa12.64□□□□□ -0.39
TRAP1-204ENST00000570514 CHL1O00533 1208 aa12.64□□□□□ -0.39
TRAP1-204ENST00000570514 TEFQ10587 303 aa12.64□□□□□ -0.39
TRAP1-204ENST00000570514 TAF7Q15545 349 aaPredicted RBP12.64□□□□□ -0.39
TRAP1-204ENST00000570514 ERICH6BQ5W0A0 696 aa12.64□□□□□ -0.39
TRAP1-204ENST00000570514 PHKG2P15735 406 aa12.63□□□□□ -0.39
TRAP1-204ENST00000570514 NKX1-1Q15270 411 aaPredicted RBP12.63□□□□□ -0.39
TRAP1-204ENST00000570514 C8orf37Q96NL8 207 aa12.63□□□□□ -0.39
TRAP1-204ENST00000570514 BCL9LQ86UU0 1499 aa12.62□□□□□ -0.39
TRAP1-204ENST00000570514 ERVV-2B6SEH9 535 aa12.62□□□□□ -0.39
TRAP1-204ENST00000570514 LRP6O75581 1613 aa12.62□□□□□ -0.39
TRAP1-204ENST00000570514 TNS2Q63HR2 1409 aa12.62□□□□□ -0.39
TRAP1-204ENST00000570514 RNF123Q5XPI4 1314 aa12.62□□□□□ -0.39
TRAP1-204ENST00000570514 MRC1P22897 1456 aa12.61□□□□□ -0.39
TRAP1-204ENST00000570514 EXOC5O00471 708 aa12.61□□□□□ -0.39
TRAP1-204ENST00000570514 RNMTO43148 476 aaKnown RBP12.61□□□□□ -0.39
TRAP1-204ENST00000570514 HOXB7P09629 217 aa12.61□□□□□ -0.39
TRAP1-204ENST00000570514 ALDH1L2Q3SY69 923 aa12.61□□□□□ -0.39
TRAP1-204ENST00000570514 MCM10Q7L590 875 aa12.61□□□□□ -0.39
TRAP1-204ENST00000570514 USP21Q9UK80 565 aa12.61□□□□□ -0.39
TRAP1-204ENST00000570514 TRPC5Q9UL62 973 aaPredicted RBP12.61□□□□□ -0.39
TRAP1-204ENST00000570514 WNK3Q9BYP7 1800 aa12.6□□□□□ -0.39
TRAP1-204ENST00000570514 MS4A1P11836 297 aa12.6□□□□□ -0.39
TRAP1-204ENST00000570514 IL17REQ8NFR9 667 aa12.6□□□□□ -0.39
TRAP1-204ENST00000570514 TSPYL4Q9UJ04 414 aa12.6□□□□□ -0.39
TRAP1-204ENST00000570514 BRPF1P55201 1214 aaPredicted RBP12.59□□□□□ -0.39
TRAP1-204ENST00000570514 SPINK5Q9NQ38 1064 aaPredicted RBP12.59□□□□□ -0.39
TRAP1-204ENST00000570514 MBIPQ9NS73 344 aa12.59□□□□□ -0.39
TRAP1-204ENST00000570514 DDB1Q16531 1140 aa12.58□□□□□ -0.4
TRAP1-204ENST00000570514 ZNF772Q68DY9 489 aaPredicted RBP12.58□□□□□ -0.4
TRAP1-204ENST00000570514 SLC52A2Q9HAB3 445 aa12.58□□□□□ -0.4
TRAP1-204ENST00000570514 CCDC9Q9Y3X0 531 aaKnown RBP12.58□□□□□ -0.4
TRAP1-204ENST00000570514 LAS1LQ9Y4W2 734 aaKnown RBP12.58□□□□□ -0.4
TRAP1-204ENST00000570514 SCN11AQ9UI33 1791 aa12.58□□□□□ -0.4
TRAP1-204ENST00000570514 KIF16BQ96L93 1317 aa12.58□□□□□ -0.4
TRAP1-204ENST00000570514 ATRNO75882 1429 aa12.57□□□□□ -0.4
TRAP1-204ENST00000570514 IPO8O15397 1037 aaKnown RBP12.57□□□□□ -0.4
TRAP1-204ENST00000570514 CYP27B1O15528 508 aa12.57□□□□□ -0.4
TRAP1-204ENST00000570514 DCTN1Q14203 1278 aa12.57□□□□□ -0.4
TRAP1-204ENST00000570514 THUMPD2Q9BTF0 503 aaKnown RBP12.57□□□□□ -0.4
TRAP1-204ENST00000570514 USP35Q9P2H5 1018 aa12.57□□□□□ -0.4
TRAP1-204ENST00000570514 SENP3-EIF4A1A0A087X0R7 540 aa12.56□□□□□ -0.4
TRAP1-204ENST00000570514 BTBD11A6QL63 1104 aa12.56□□□□□ -0.4
TRAP1-204ENST00000570514 EXOSC9Q06265 439 aaKnown RBP12.56□□□□□ -0.4
TRAP1-204ENST00000570514 TWISTNBQ3B726 338 aaPredicted RBP12.56□□□□□ -0.4
TRAP1-204ENST00000570514 MPRIPQ6WCQ1 1025 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms