RNA–Protein interactions for RNA: ENST00000570308.5

MMP2-208, Transcript of matrix metallopeptidase 2, humanhuman

TSL 1 (best) BASIC

Gene MMP2, Length 3,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2-208ENST00000570308 K7ELQ4 463 aaPredicted RBP12.78□□□□□ -0.36
MMP2-208ENST00000570308 COL3A1P02461 1466 aaPredicted RBP12.77□□□□□ -0.37
MMP2-208ENST00000570308 LRSAM1Q6UWE0 723 aa12.77□□□□□ -0.37
MMP2-208ENST00000570308 ADAMTS13Q76LX8 1427 aa12.77□□□□□ -0.37
MMP2-208ENST00000570308 TSPYL1Q9H0U9 437 aa12.77□□□□□ -0.37
MMP2-208ENST00000570308 DIAPH3Q9NSV4 1193 aa12.77□□□□□ -0.37
MMP2-208ENST00000570308 SPINK5Q9NQ38 1064 aaPredicted RBP12.76□□□□□ -0.37
MMP2-208ENST00000570308 CALCOCO1Q9P1Z2 691 aa12.76□□□□□ -0.37
MMP2-208ENST00000570308 A0A1W2PP64 1363 aa12.76□□□□□ -0.37
MMP2-208ENST00000570308 NRKQ7Z2Y5 1582 aa12.75□□□□□ -0.37
MMP2-208ENST00000570308 NUCB2P80303 420 aa12.75□□□□□ -0.37
MMP2-208ENST00000570308 AEBP1Q8IUX7 1158 aa12.75□□□□□ -0.37
MMP2-208ENST00000570308 CPSF1Q10570 1443 aaKnown RBP12.75□□□□□ -0.37
MMP2-208ENST00000570308 CERS3Q8IU89 383 aa12.75□□□□□ -0.37
MMP2-208ENST00000570308 ANKRD7Q92527 254 aa12.75□□□□□ -0.37
MMP2-208ENST00000570308 LMBRD1Q9NUN5 540 aa12.75□□□□□ -0.37
MMP2-208ENST00000570308 XRN1Q8IZH2 1706 aaKnown RBP12.74□□□□□ -0.37
MMP2-208ENST00000570308 TRIM6-TRIM34B2RNG4 842 aa12.74□□□□□ -0.37
MMP2-208ENST00000570308 RNF214Q8ND24 703 aa12.74□□□□□ -0.37
MMP2-208ENST00000570308 TRIM34Q9BYJ4 488 aa12.74□□□□□ -0.37
MMP2-208ENST00000570308 ITSN1Q15811 1721 aa12.73□□□□□ -0.37
MMP2-208ENST00000570308 SLC12A5Q9H2X9 1139 aa12.73□□□□□ -0.37
MMP2-208ENST00000570308 PTCH1Q13635 1447 aa12.73□□□□□ -0.37
MMP2-208ENST00000570308 SYCE3A1L190 88 aa12.73□□□□□ -0.37
MMP2-208ENST00000570308 SLFN14P0C7P3 912 aa12.73□□□□□ -0.37
MMP2-208ENST00000570308 FKBP5Q13451 457 aaPredicted RBP12.73□□□□□ -0.37
MMP2-208ENST00000570308 CCDC146Q8IYE0 955 aa12.73□□□□□ -0.37
MMP2-208ENST00000570308 RBM27Q9P2N5 1060 aaKnown RBP12.73□□□□□ -0.37
MMP2-208ENST00000570308 ADAMTSL3P82987 1691 aa12.72□□□□□ -0.37
MMP2-208ENST00000570308 APAF1O14727 1248 aa12.72□□□□□ -0.37
MMP2-208ENST00000570308 PRAM1Q96QH2 718 aa12.72□□□□□ -0.37
MMP2-208ENST00000570308 PNPLA6Q8IY17 1366 aa12.72□□□□□ -0.37
MMP2-208ENST00000570308 PRPF40AO75400 957 aaKnown RBP12.72□□□□□ -0.37
MMP2-208ENST00000570308 GAS2L2Q8NHY3 880 aa12.72□□□□□ -0.37
MMP2-208ENST00000570308 METP08581 1390 aa12.72□□□□□ -0.37
MMP2-208ENST00000570308 USP54Q70EL1 1684 aa12.71□□□□□ -0.37
MMP2-208ENST00000570308 ESF1Q9H501 851 aaKnown RBP12.71□□□□□ -0.37
MMP2-208ENST00000570308 PHF23Q9BUL5 403 aaPredicted RBP12.71□□□□□ -0.37
MMP2-208ENST00000570308 KIF16BQ96L93 1317 aa12.71□□□□□ -0.37
MMP2-208ENST00000570308 TERF2IPQ9NYB0 399 aa12.71□□□□□ -0.38
MMP2-208ENST00000570308 STAG3Q9UJ98 1225 aa12.71□□□□□ -0.38
MMP2-208ENST00000570308 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.71□□□□□ -0.38
MMP2-208ENST00000570308 LRRC7Q96NW7 1537 aa12.7□□□□□ -0.38
MMP2-208ENST00000570308 EDC4Q6P2E9 1401 aaKnown RBP12.7□□□□□ -0.38
MMP2-208ENST00000570308 TULP2O00295 520 aa12.7□□□□□ -0.38
MMP2-208ENST00000570308 RIOK3O14730 519 aaKnown RBP12.7□□□□□ -0.38
MMP2-208ENST00000570308 SPTLC3Q9NUV7 552 aa12.7□□□□□ -0.38
MMP2-208ENST00000570308 NALCNQ8IZF0 1738 aa12.7□□□□□ -0.38
MMP2-208ENST00000570308 TERF2Q15554 542 aa12.69□□□□□ -0.38
MMP2-208ENST00000570308 CD2BP2O95400 341 aaKnown RBP12.69□□□□□ -0.38
MMP2-208ENST00000570308 CCDC27Q2M243 656 aa12.69□□□□□ -0.38
MMP2-208ENST00000570308 NUTM2DQ5VT03 806 aaPredicted RBP12.69□□□□□ -0.38
MMP2-208ENST00000570308 MORC1Q86VD1 984 aa12.69□□□□□ -0.38
MMP2-208ENST00000570308 GPT2Q8TD30 523 aa12.69□□□□□ -0.38
MMP2-208ENST00000570308 TSPY26PQ9H489 355 aa12.69□□□□□ -0.38
MMP2-208ENST00000570308 TNNT3P45378 269 aaPredicted RBP12.69□□□□□ -0.38
MMP2-208ENST00000570308 CEP170BQ9Y4F5 1589 aaPredicted RBP12.69□□□□□ -0.38
MMP2-208ENST00000570308 PIK3R4Q99570 1358 aa12.68□□□□□ -0.38
MMP2-208ENST00000570308 CAPN2P17655 700 aa12.68□□□□□ -0.38
MMP2-208ENST00000570308 CABP2Q9NPB3 220 aa12.68□□□□□ -0.38
MMP2-208ENST00000570308 TMEM63CQ9P1W3 806 aa12.68□□□□□ -0.38
MMP2-208ENST00000570308 CTIFO43310 598 aaKnown RBP12.67□□□□□ -0.38
MMP2-208ENST00000570308 RLBP1P12271 317 aa12.67□□□□□ -0.38
MMP2-208ENST00000570308 DHX37Q8IY37 1157 aaKnown RBP12.67□□□□□ -0.38
MMP2-208ENST00000570308 C17orf53Q8N3J3 647 aaPredicted RBP12.67□□□□□ -0.38
MMP2-208ENST00000570308 MPNDQ8N594 471 aa12.67□□□□□ -0.38
MMP2-208ENST00000570308 MBD3O95983 291 aa12.67□□□□□ -0.38
MMP2-208ENST00000570308 CDK19Q9BWU1 502 aa12.67□□□□□ -0.38
MMP2-208ENST00000570308 DDX41Q9UJV9 622 aaKnown RBP12.67□□□□□ -0.38
MMP2-208ENST00000570308 AATKQ6ZMQ8 1374 aa12.67□□□□□ -0.38
MMP2-208ENST00000570308 ERICH4A6NGS2 130 aa12.67□□□□□ -0.38
MMP2-208ENST00000570308 KIF2CQ99661 725 aa12.67□□□□□ -0.38
MMP2-208ENST00000570308 TTC12Q9H892 705 aaPredicted RBP12.67□□□□□ -0.38
MMP2-208ENST00000570308 CTNNA3Q9UI47 895 aa12.67□□□□□ -0.38
MMP2-208ENST00000570308 RARSP54136 660 aaKnown RBP12.66□□□□□ -0.38
MMP2-208ENST00000570308 YY1AP1Q9H869 796 aa12.66□□□□□ -0.38
MMP2-208ENST00000570308 WASLO00401 505 aaPredicted RBP12.66□□□□□ -0.38
MMP2-208ENST00000570308 RNF216Q9NWF9 866 aaPredicted RBP12.66□□□□□ -0.38
MMP2-208ENST00000570308 MORC2Q9Y6X9 1032 aaPredicted RBP12.66□□□□□ -0.38
MMP2-208ENST00000570308 HDGFL2Q7Z4V5 671 aaPredicted RBP12.65□□□□□ -0.38
MMP2-208ENST00000570308 KRT222Q8N1A0 295 aa12.65□□□□□ -0.38
MMP2-208ENST00000570308 SYAP1Q96A49 352 aaPredicted RBP12.65□□□□□ -0.38
MMP2-208ENST00000570308 CFAP53Q96M91 514 aa12.65□□□□□ -0.38
MMP2-208ENST00000570308 EFCC1Q9HA90 598 aa12.65□□□□□ -0.38
MMP2-208ENST00000570308 APPP05067 770 aa12.65□□□□□ -0.38
MMP2-208ENST00000570308 MLECQ14165 292 aa12.65□□□□□ -0.38
MMP2-208ENST00000570308 AK9Q5TCS8 1911 aa12.64□□□□□ -0.39
MMP2-208ENST00000570308 CDK12Q9NYV4 1490 aaPredicted RBP12.64□□□□□ -0.39
MMP2-208ENST00000570308 FAM193AP78312 1265 aa12.64□□□□□ -0.39
MMP2-208ENST00000570308 MVPQ14764 893 aaKnown RBP12.64□□□□□ -0.39
MMP2-208ENST00000570308 SYCP1Q15431 976 aa12.64□□□□□ -0.39
MMP2-208ENST00000570308 RBM42Q9BTD8 480 aaKnown RBP12.64□□□□□ -0.39
MMP2-208ENST00000570308 GEMIN8Q9NWZ8 242 aaKnown RBP12.64□□□□□ -0.39
MMP2-208ENST00000570308 HDAC5Q9UQL6 1122 aa12.64□□□□□ -0.39
MMP2-208ENST00000570308 CLGNO14967 610 aa12.64□□□□□ -0.39
MMP2-208ENST00000570308 SRPK2P78362 688 aaKnown RBP12.64□□□□□ -0.39
MMP2-208ENST00000570308 UVSSAQ2YD98 709 aa12.64□□□□□ -0.39
MMP2-208ENST00000570308 FAM184AQ8NB25 1140 aa12.64□□□□□ -0.39
MMP2-208ENST00000570308 RUNDC1Q96C34 613 aa12.64□□□□□ -0.39
MMP2-208ENST00000570308 CWC22Q9HCG8 908 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms