RNA–Protein interactions for RNA: ENST00000570169.1

TRAF7-207, Transcript of TNF receptor associated factor 7, humanhuman

TSL 3

Gene TRAF7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7-207ENST00000570169 FAM9BQ8IZU0 186 aa27.38■■□□□ 1.97
TRAF7-207ENST00000570169 PLEKHO1Q53GL0 409 aaPredicted RBP27.37■■□□□ 1.97
TRAF7-207ENST00000570169 EXOC5O00471 708 aa27.36■■□□□ 1.97
TRAF7-207ENST00000570169 ONECUT3O60422 494 aaPredicted RBP27.36■■□□□ 1.97
TRAF7-207ENST00000570169 AMOTQ4VCS5 1084 aa27.36■■□□□ 1.97
TRAF7-207ENST00000570169 SPG7Q9UQ90 795 aa27.36■■□□□ 1.97
TRAF7-207ENST00000570169 MAPK8IP3Q9UPT6 1336 aa27.36■■□□□ 1.97
TRAF7-207ENST00000570169 DISP2A7MBM2 1401 aa27.35■■□□□ 1.97
TRAF7-207ENST00000570169 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.35■■□□□ 1.97
TRAF7-207ENST00000570169 OVOS2A0A0G2JMS6 1433 aa27.34■■□□□ 1.97
TRAF7-207ENST00000570169 PARP4Q9UKK3 1724 aaKnown RBP27.34■■□□□ 1.97
TRAF7-207ENST00000570169 DDB1Q16531 1140 aa27.34■■□□□ 1.97
TRAF7-207ENST00000570169 ZCRB1Q8TBF4 217 aaKnown RBP27.34■■□□□ 1.97
TRAF7-207ENST00000570169 MEGF6O75095 1541 aa27.34■■□□□ 1.97
TRAF7-207ENST00000570169 SEPT12Q8IYM1 358 aa27.33■■□□□ 1.97
TRAF7-207ENST00000570169 RUNDC1Q96C34 613 aa27.33■■□□□ 1.97
TRAF7-207ENST00000570169 PDE3BQ13370 1112 aa27.31■■□□□ 1.96
TRAF7-207ENST00000570169 WNK3Q9BYP7 1800 aa27.31■■□□□ 1.96
TRAF7-207ENST00000570169 GAS2L2Q8NHY3 880 aa27.29■■□□□ 1.96
TRAF7-207ENST00000570169 PCDH11XQ9BZA7 1347 aa27.28■■□□□ 1.96
TRAF7-207ENST00000570169 PCDH11YQ9BZA8 1340 aa27.28■■□□□ 1.96
TRAF7-207ENST00000570169 CCDC146Q8IYE0 955 aa27.28■■□□□ 1.96
TRAF7-207ENST00000570169 PLEKHF1Q96S99 279 aa27.28■■□□□ 1.96
TRAF7-207ENST00000570169 THSD7AQ9UPZ6 1657 aa27.27■■□□□ 1.96
TRAF7-207ENST00000570169 TNS2Q63HR2 1409 aa27.27■■□□□ 1.96
TRAF7-207ENST00000570169 C1orf141Q5JVX7 400 aa27.27■■□□□ 1.96
TRAF7-207ENST00000570169 ZNF530Q6P9A1 599 aaPredicted RBP27.26■■□□□ 1.95
TRAF7-207ENST00000570169 DDX54Q8TDD1 881 aaKnown RBP27.26■■□□□ 1.95
TRAF7-207ENST00000570169 PHACTR3Q96KR7 559 aa27.26■■□□□ 1.95
TRAF7-207ENST00000570169 MTHFSDQ2M296 383 aaKnown RBP27.24■■□□□ 1.95
TRAF7-207ENST00000570169 IFNL2Q8IZJ0 200 aa27.24■■□□□ 1.95
TRAF7-207ENST00000570169 LRRC37A3O60309 1634 aa27.23■■□□□ 1.95
TRAF7-207ENST00000570169 PKD1L3Q7Z443 1732 aa27.22■■□□□ 1.95
TRAF7-207ENST00000570169 HSP90AB1P08238 724 aaKnown RBP27.22■■□□□ 1.95
TRAF7-207ENST00000570169 KRT27Q7Z3Y8 459 aa27.22■■□□□ 1.95
TRAF7-207ENST00000570169 NFE2L2Q16236 605 aa27.21■■□□□ 1.95
TRAF7-207ENST00000570169 AKAP4Q5JQC9 854 aa27.21■■□□□ 1.95
TRAF7-207ENST00000570169 RGS12O14924 1447 aa27.21■■□□□ 1.95
TRAF7-207ENST00000570169 PHKG2P15735 406 aa27.19■■□□□ 1.94
TRAF7-207ENST00000570169 GNAT3A8MTJ3 354 aa27.18■■□□□ 1.94
TRAF7-207ENST00000570169 APAF1O14727 1248 aa27.18■■□□□ 1.94
TRAF7-207ENST00000570169 CYP27B1O15528 508 aa27.18■■□□□ 1.94
TRAF7-207ENST00000570169 TMPOP42166 694 aaKnown RBP27.18■■□□□ 1.94
TRAF7-207ENST00000570169 RTF1Q92541 710 aaKnown RBP27.18■■□□□ 1.94
TRAF7-207ENST00000570169 LMOD3Q0VAK6 560 aa27.17■■□□□ 1.94
TRAF7-207ENST00000570169 RIPK4P57078 832 aa27.16■■□□□ 1.94
TRAF7-207ENST00000570169 MARCH10Q8NA82 808 aaPredicted RBP27.16■■□□□ 1.94
TRAF7-207ENST00000570169 MAP3K5Q99683 1374 aa27.16■■□□□ 1.94
TRAF7-207ENST00000570169 HTATSF1O43719 755 aaKnown RBP27.15■■□□□ 1.94
TRAF7-207ENST00000570169 NEUROD2Q15784 382 aa27.15■■□□□ 1.94
TRAF7-207ENST00000570169 NGEFQ8N5V2 710 aa27.14■■□□□ 1.94
TRAF7-207ENST00000570169 DCAF5Q96JK2 942 aa27.14■■□□□ 1.94
TRAF7-207ENST00000570169 NKX1-1Q15270 411 aaPredicted RBP27.13■■□□□ 1.93
TRAF7-207ENST00000570169 RRP7AQ9Y3A4 280 aaKnown RBP27.13■■□□□ 1.93
TRAF7-207ENST00000570169 FAM196AQ6ZSG2 479 aa27.12■■□□□ 1.93
TRAF7-207ENST00000570169 SHANK3Q9BYB0 1731 aa27.12■■□□□ 1.93
TRAF7-207ENST00000570169 NCBP3Q53F19 620 aaKnown RBP27.1■■□□□ 1.93
TRAF7-207ENST00000570169 MPRIPQ6WCQ1 1025 aa27.1■■□□□ 1.93
TRAF7-207ENST00000570169 BRWD3Q6RI45 1802 aa27.1■■□□□ 1.93
TRAF7-207ENST00000570169 RNMTO43148 476 aaKnown RBP27.07■■□□□ 1.92
TRAF7-207ENST00000570169 FAM182BQ5T319 152 aa27.07■■□□□ 1.92
TRAF7-207ENST00000570169 BCL9O00512 1426 aa27.07■■□□□ 1.92
TRAF7-207ENST00000570169 ERVV-2B6SEH9 535 aa27.06■■□□□ 1.92
TRAF7-207ENST00000570169 CCDC27Q2M243 656 aa27.05■■□□□ 1.92
TRAF7-207ENST00000570169 CABP4P57796 275 aa27.04■■□□□ 1.92
TRAF7-207ENST00000570169 CALD1Q05682 793 aaKnown RBP27.04■■□□□ 1.92
TRAF7-207ENST00000570169 TEFQ10587 303 aa27.04■■□□□ 1.92
TRAF7-207ENST00000570169 SALL2Q9Y467 1007 aaPredicted RBP27.04■■□□□ 1.92
TRAF7-207ENST00000570169 MCM10Q7L590 875 aa27.03■■□□□ 1.92
TRAF7-207ENST00000570169 IL17REQ8NFR9 667 aa27.03■■□□□ 1.92
TRAF7-207ENST00000570169 SYTL4Q96C24 671 aaPredicted RBP27.03■■□□□ 1.92
TRAF7-207ENST00000570169 LGR6Q9HBX8 967 aa27.03■■□□□ 1.92
TRAF7-207ENST00000570169 KDM6AO15550 1401 aaPredicted RBP27.02■■□□□ 1.92
TRAF7-207ENST00000570169 SENP3-EIF4A1A0A087X0R7 540 aa27.02■■□□□ 1.92
TRAF7-207ENST00000570169 HNRNPUQ00839 825 aaKnown RBP eCLIP27.02■■□□□ 1.92
TRAF7-207ENST00000570169 ACSBG1Q96GR2 724 aa27.02■■□□□ 1.92
TRAF7-207ENST00000570169 TRIM35Q9UPQ4 493 aa27.02■■□□□ 1.92
TRAF7-207ENST00000570169 DLG5Q8TDM6 1919 aa27.01■■□□□ 1.91
TRAF7-207ENST00000570169 DCTN1Q14203 1278 aa27.01■■□□□ 1.91
TRAF7-207ENST00000570169 TMOD3Q9NYL9 352 aa27.01■■□□□ 1.91
TRAF7-207ENST00000570169 PRIM1P49642 420 aaKnown RBP27■■□□□ 1.91
TRAF7-207ENST00000570169 CEMIPQ8WUJ3 1361 aa26.99■■□□□ 1.91
TRAF7-207ENST00000570169 SLC52A2Q9HAB3 445 aa26.99■■□□□ 1.91
TRAF7-207ENST00000570169 WWC1Q8IX03 1113 aa26.98■■□□□ 1.91
TRAF7-207ENST00000570169 SCN11AQ9UI33 1791 aa26.98■■□□□ 1.91
TRAF7-207ENST00000570169 ADAMTS7Q9UKP4 1686 aa26.96■■□□□ 1.91
TRAF7-207ENST00000570169 NFATC2IPQ8NCF5 419 aa26.96■■□□□ 1.91
TRAF7-207ENST00000570169 THUMPD2Q9BTF0 503 aaKnown RBP26.96■■□□□ 1.91
TRAF7-207ENST00000570169 BCL11BQ9C0K0 894 aaPredicted RBP26.96■■□□□ 1.91
TRAF7-207ENST00000570169 DOT1LQ8TEK3 1739 aa26.96■■□□□ 1.91
TRAF7-207ENST00000570169 KAT6BQ8WYB5 2073 aa26.95■■□□□ 1.9
TRAF7-207ENST00000570169 TAF7Q15545 349 aaPredicted RBP26.95■■□□□ 1.9
TRAF7-207ENST00000570169 WDR63Q8IWG1 891 aa26.94■■□□□ 1.9
TRAF7-207ENST00000570169 KCNQ2O43526 872 aa26.93■■□□□ 1.9
TRAF7-207ENST00000570169 TRIM37O94972 964 aa26.93■■□□□ 1.9
TRAF7-207ENST00000570169 MRC1P22897 1456 aa26.93■■□□□ 1.9
TRAF7-207ENST00000570169 PIGBQ92521 554 aa26.92■■□□□ 1.9
TRAF7-207ENST00000570169 TOGARAM1Q9Y4F4 1720 aa26.92■■□□□ 1.9
TRAF7-207ENST00000570169 NHSQ6T4R5 1651 aa26.92■■□□□ 1.9
TRAF7-207ENST00000570169 BTBD11A6QL63 1104 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms