RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 BIN2Q9UBW5 565 aaPredicted RBP4.8□□□□□ -1.64
CNOT1-221ENST00000569924 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.8□□□□□ -1.64
CNOT1-221ENST00000569924 FANCAO15360 1455 aa4.8□□□□□ -1.64
CNOT1-221ENST00000569924 RIMS1Q86UR5 1692 aaKnown RBP4.8□□□□□ -1.64
CNOT1-221ENST00000569924 ZFYVE16Q7Z3T8 1539 aa4.79□□□□□ -1.64
CNOT1-221ENST00000569924 POTEIP0CG38 1075 aa4.79□□□□□ -1.64
CNOT1-221ENST00000569924 SLC4A3P48751 1232 aa4.79□□□□□ -1.64
CNOT1-221ENST00000569924 HDGFP51858 240 aaKnown RBP4.79□□□□□ -1.64
CNOT1-221ENST00000569924 PROX2Q3B8N5 592 aa4.79□□□□□ -1.64
CNOT1-221ENST00000569924 ANKMY2Q8IV38 441 aa4.79□□□□□ -1.64
CNOT1-221ENST00000569924 KIAA1468Q9P260 1216 aa4.79□□□□□ -1.64
CNOT1-221ENST00000569924 FKBPLQ9UIM3 349 aa4.79□□□□□ -1.64
CNOT1-221ENST00000569924 TTC37Q6PGP7 1564 aa4.78□□□□□ -1.64
CNOT1-221ENST00000569924 ZC3H4Q9UPT8 1303 aaKnown RBP4.78□□□□□ -1.64
CNOT1-221ENST00000569924 HOXB3P14651 431 aaPredicted RBP4.78□□□□□ -1.64
CNOT1-221ENST00000569924 CANXP27824 592 aaKnown RBP4.78□□□□□ -1.64
CNOT1-221ENST00000569924 SREK1Q8WXA9 508 aaKnown RBP4.78□□□□□ -1.64
CNOT1-221ENST00000569924 ZNF592Q92610 1267 aa4.78□□□□□ -1.64
CNOT1-221ENST00000569924 CEP126Q9P2H0 1117 aa4.78□□□□□ -1.64
CNOT1-221ENST00000569924 HECW1Q76N89 1606 aa4.78□□□□□ -1.64
CNOT1-221ENST00000569924 PLCH2O75038 1416 aa4.78□□□□□ -1.64
CNOT1-221ENST00000569924 MCCD1P59942 119 aaPredicted RBP4.77□□□□□ -1.65
CNOT1-221ENST00000569924 DPYDQ12882 1025 aa4.77□□□□□ -1.65
CNOT1-221ENST00000569924 NCOA4Q13772 614 aa4.77□□□□□ -1.65
CNOT1-221ENST00000569924 Q3C1V9 767 aa4.77□□□□□ -1.65
CNOT1-221ENST00000569924 SLFNL1Q499Z3 407 aa4.77□□□□□ -1.65
CNOT1-221ENST00000569924 PHTF2Q8N3S3 785 aa4.77□□□□□ -1.65
CNOT1-221ENST00000569924 EGFL7Q9UHF1 273 aa4.77□□□□□ -1.65
CNOT1-221ENST00000569924 SCAPERQ9BY12 1400 aa4.77□□□□□ -1.65
CNOT1-221ENST00000569924 YEATS2Q9ULM3 1422 aa4.77□□□□□ -1.65
CNOT1-221ENST00000569924 SIGLEC1Q9BZZ2 1709 aa4.77□□□□□ -1.65
CNOT1-221ENST00000569924 ATP10AO60312 1499 aa4.76□□□□□ -1.65
CNOT1-221ENST00000569924 FER1L4A9Z1Z3 1794 aa4.76□□□□□ -1.65
CNOT1-221ENST00000569924 CFHP08603 1231 aa4.76□□□□□ -1.65
CNOT1-221ENST00000569924 ZC3H6P61129 1189 aaKnown RBP4.76□□□□□ -1.65
CNOT1-221ENST00000569924 EFCAB2Q5VUJ9 269 aa4.76□□□□□ -1.65
CNOT1-221ENST00000569924 C9orf84Q5VXU9 1444 aa4.76□□□□□ -1.65
CNOT1-221ENST00000569924 FMN1Q68DA7 1419 aa4.76□□□□□ -1.65
CNOT1-221ENST00000569924 SPATA31D1Q6ZQQ2 1576 aa4.76□□□□□ -1.65
CNOT1-221ENST00000569924 FBXO33Q7Z6M2 555 aa4.76□□□□□ -1.65
CNOT1-221ENST00000569924 RNF135Q8IUD6 432 aa4.76□□□□□ -1.65
CNOT1-221ENST00000569924 OGFOD1Q8N543 542 aa4.76□□□□□ -1.65
CNOT1-221ENST00000569924 PLPP7Q8NBV4 271 aa4.76□□□□□ -1.65
CNOT1-221ENST00000569924 CHIC2Q9UKJ5 165 aa4.76□□□□□ -1.65
CNOT1-221ENST00000569924 CDK13Q14004 1512 aaKnown RBP4.76□□□□□ -1.65
CNOT1-221ENST00000569924 ARHGEF12Q9NZN5 1544 aa4.76□□□□□ -1.65
CNOT1-221ENST00000569924 MYO5CQ9NQX4 1742 aa4.75□□□□□ -1.65
CNOT1-221ENST00000569924 SCNN1AP37088 669 aa4.75□□□□□ -1.65
CNOT1-221ENST00000569924 HSPA2P54652 639 aa4.75□□□□□ -1.65
CNOT1-221ENST00000569924 EML3Q32P44 896 aa4.75□□□□□ -1.65
CNOT1-221ENST00000569924 MAP7D1Q3KQU3 841 aa4.75□□□□□ -1.65
CNOT1-221ENST00000569924 MORN1Q5T089 497 aa4.75□□□□□ -1.65
CNOT1-221ENST00000569924 TAS1R3Q7RTX0 852 aa4.75□□□□□ -1.65
CNOT1-221ENST00000569924 TRIM50Q86XT4 487 aa4.75□□□□□ -1.65
CNOT1-221ENST00000569924 ZBED2Q9BTP6 218 aa4.75□□□□□ -1.65
CNOT1-221ENST00000569924 GPSM3Q9Y4H4 160 aa4.75□□□□□ -1.65
CNOT1-221ENST00000569924 ZNF518AQ6AHZ1 1483 aa4.75□□□□□ -1.65
CNOT1-221ENST00000569924 KDM5CP41229 1560 aa4.74□□□□□ -1.65
CNOT1-221ENST00000569924 REREQ9P2R6 1566 aa4.74□□□□□ -1.65
CNOT1-221ENST00000569924 PREX1Q8TCU6 1659 aa4.74□□□□□ -1.65
CNOT1-221ENST00000569924 TROQ12816 1431 aaPredicted RBP4.74□□□□□ -1.65
CNOT1-221ENST00000569924 POTEMA6NI47 508 aa4.74□□□□□ -1.65
CNOT1-221ENST00000569924 ICMTO60725 284 aa4.74□□□□□ -1.65
CNOT1-221ENST00000569924 F12P00748 615 aaPredicted RBP4.74□□□□□ -1.65
CNOT1-221ENST00000569924 ATP1A2P50993 1020 aa4.74□□□□□ -1.65
CNOT1-221ENST00000569924 CLDN10P78369 228 aa4.74□□□□□ -1.65
CNOT1-221ENST00000569924 KCNH2Q12809 1159 aa4.74□□□□□ -1.65
CNOT1-221ENST00000569924 COL19A1Q14993 1142 aa4.74□□□□□ -1.65
CNOT1-221ENST00000569924 LARGE2Q8N3Y3 721 aa4.74□□□□□ -1.65
CNOT1-221ENST00000569924 UBXN4Q92575 508 aa4.74□□□□□ -1.65
CNOT1-221ENST00000569924 ASB16Q96NS5 453 aa4.74□□□□□ -1.65
CNOT1-221ENST00000569924 KCNK17Q96T54 332 aa4.74□□□□□ -1.65
CNOT1-221ENST00000569924 BCL11AQ9H165 835 aa4.74□□□□□ -1.65
CNOT1-221ENST00000569924 DNAAF2Q9NVR5 837 aaKnown RBP4.74□□□□□ -1.65
CNOT1-221ENST00000569924 RABGEF1Q9UJ41 708 aa4.74□□□□□ -1.65
CNOT1-221ENST00000569924 SETD1BQ9UPS6 1966 aaKnown RBP4.74□□□□□ -1.65
CNOT1-221ENST00000569924 CLIP1P30622 1438 aa4.73□□□□□ -1.65
CNOT1-221ENST00000569924 KIF14Q15058 1648 aa4.73□□□□□ -1.65
CNOT1-221ENST00000569924 DKK1O94907 266 aa4.73□□□□□ -1.65
CNOT1-221ENST00000569924 RECKO95980 971 aa4.73□□□□□ -1.65
CNOT1-221ENST00000569924 ABL1P00519 1130 aa4.73□□□□□ -1.65
CNOT1-221ENST00000569924 MAPK1P28482 360 aa4.73□□□□□ -1.65
CNOT1-221ENST00000569924 TAGLNQ01995 201 aaKnown RBP4.73□□□□□ -1.65
CNOT1-221ENST00000569924 PTK2Q05397 1052 aa4.73□□□□□ -1.65
CNOT1-221ENST00000569924 MLECQ14165 292 aa4.73□□□□□ -1.65
CNOT1-221ENST00000569924 KMT5BQ4FZB7 885 aa4.73□□□□□ -1.65
CNOT1-221ENST00000569924 NAALADL2Q58DX5 795 aa4.73□□□□□ -1.65
CNOT1-221ENST00000569924 TRAF7Q6Q0C0 670 aa4.73□□□□□ -1.65
CNOT1-221ENST00000569924 ZSCAN29Q8IWY8 852 aaPredicted RBP4.73□□□□□ -1.65
CNOT1-221ENST00000569924 SIX5Q8N196 739 aa4.73□□□□□ -1.65
CNOT1-221ENST00000569924 ZNF594Q96JF6 807 aaPredicted RBP4.73□□□□□ -1.65
CNOT1-221ENST00000569924 SPATA32Q96LK8 384 aa4.73□□□□□ -1.65
CNOT1-221ENST00000569924 CXXC1Q9P0U4 656 aaPredicted RBP4.73□□□□□ -1.65
CNOT1-221ENST00000569924 NOD1Q9Y239 953 aa4.73□□□□□ -1.65
CNOT1-221ENST00000569924 SLC27A5Q9Y2P5 690 aa4.73□□□□□ -1.65
CNOT1-221ENST00000569924 ARHGAP35Q9NRY4 1499 aa4.73□□□□□ -1.65
CNOT1-221ENST00000569924 MLH3Q9UHC1 1453 aa4.73□□□□□ -1.65
CNOT1-221ENST00000569924 AGLP35573 1532 aa4.72□□□□□ -1.65
CNOT1-221ENST00000569924 ARHGAP5Q13017 1502 aa4.72□□□□□ -1.65
CNOT1-221ENST00000569924 H3BRB1 525 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms