RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 USHBP1Q8N6Y0 703 aa31.1■■■□□ 2.57
RBFOX1-219ENST00000569895 MYOM1P52179 1685 aa31.09■■■□□ 2.57
RBFOX1-219ENST00000569895 PPM1GO15355 546 aaPredicted RBP31.09■■■□□ 2.57
RBFOX1-219ENST00000569895 PRIM1P49642 420 aaKnown RBP31.09■■■□□ 2.57
RBFOX1-219ENST00000569895 EMILIN1Q9Y6C2 1016 aa31.08■■■□□ 2.57
RBFOX1-219ENST00000569895 MEGF6O75095 1541 aa31.08■■■□□ 2.57
RBFOX1-219ENST00000569895 SLC27A3Q5K4L6 730 aa31.07■■■□□ 2.56
RBFOX1-219ENST00000569895 ZBTB7AO95365 584 aa31.05■■■□□ 2.56
RBFOX1-219ENST00000569895 PDGFDQ9GZP0 370 aaPredicted RBP31.05■■■□□ 2.56
RBFOX1-219ENST00000569895 KAT6BQ8WYB5 2073 aa31.05■■■□□ 2.56
RBFOX1-219ENST00000569895 RGPD2P0DJD1 1756 aa31.03■■■□□ 2.56
RBFOX1-219ENST00000569895 BTAF1O14981 1849 aa31.03■■■□□ 2.56
RBFOX1-219ENST00000569895 WASHC2AQ641Q2 1341 aa31.02■■■□□ 2.56
RBFOX1-219ENST00000569895 PCDH11XQ9BZA7 1347 aa31.01■■■□□ 2.56
RBFOX1-219ENST00000569895 PCDH11YQ9BZA8 1340 aa31.01■■■□□ 2.56
RBFOX1-219ENST00000569895 DCAF8L1A6NGE4 600 aa31.01■■■□□ 2.55
RBFOX1-219ENST00000569895 LRRC4BQ9NT99 713 aa31.01■■■□□ 2.55
RBFOX1-219ENST00000569895 ATF5Q9Y2D1 282 aaPredicted RBP31.01■■■□□ 2.55
RBFOX1-219ENST00000569895 MTFR1LQ9H019 292 aa31■■■□□ 2.55
RBFOX1-219ENST00000569895 PANK3Q9H999 370 aa31■■■□□ 2.55
RBFOX1-219ENST00000569895 CASZ1Q86V15 1759 aa30.99■■■□□ 2.55
RBFOX1-219ENST00000569895 POLKQ9UBT6 870 aa30.98■■■□□ 2.55
RBFOX1-219ENST00000569895 HMGB2P26583 209 aaKnown RBP30.95■■■□□ 2.55
RBFOX1-219ENST00000569895 PTGER2P43116 358 aa30.95■■■□□ 2.55
RBFOX1-219ENST00000569895 TNNT2P45379 298 aaPredicted RBP30.95■■■□□ 2.55
RBFOX1-219ENST00000569895 ZNF827Q17R98 1081 aa30.94■■■□□ 2.54
RBFOX1-219ENST00000569895 AKT1S1Q96B36 256 aa30.94■■■□□ 2.54
RBFOX1-219ENST00000569895 SPG7Q9UQ90 795 aa30.94■■■□□ 2.54
RBFOX1-219ENST00000569895 NSD2O96028 1365 aa30.92■■■□□ 2.54
RBFOX1-219ENST00000569895 EYA1Q99502 592 aa30.92■■■□□ 2.54
RBFOX1-219ENST00000569895 CCNL1Q9UK58 526 aaPredicted RBP30.92■■■□□ 2.54
RBFOX1-219ENST00000569895 SHANK3Q9BYB0 1731 aa30.91■■■□□ 2.54
RBFOX1-219ENST00000569895 TFCP2L1Q9NZI6 479 aa30.91■■■□□ 2.54
RBFOX1-219ENST00000569895 PAPPAQ13219 1627 aa30.91■■■□□ 2.54
RBFOX1-219ENST00000569895 DOT1LQ8TEK3 1739 aa30.9■■■□□ 2.54
RBFOX1-219ENST00000569895 CYP27B1O15528 508 aa30.9■■■□□ 2.54
RBFOX1-219ENST00000569895 SLC16A10Q8TF71 515 aa30.9■■■□□ 2.54
RBFOX1-219ENST00000569895 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.89■■■□□ 2.54
RBFOX1-219ENST00000569895 KCNQ4P56696 695 aa30.88■■■□□ 2.53
RBFOX1-219ENST00000569895 KNSTRNQ9Y448 316 aa30.88■■■□□ 2.53
RBFOX1-219ENST00000569895 NCAPD2Q15021 1401 aa30.88■■■□□ 2.53
RBFOX1-219ENST00000569895 MPRIPQ6WCQ1 1025 aa30.87■■■□□ 2.53
RBFOX1-219ENST00000569895 MAP2P11137 1827 aaKnown RBP30.87■■■□□ 2.53
RBFOX1-219ENST00000569895 ANKRD26Q9UPS8 1709 aa30.85■■■□□ 2.53
RBFOX1-219ENST00000569895 EIF4A2Q14240 407 aaKnown RBP30.85■■■□□ 2.53
RBFOX1-219ENST00000569895 NKX1-1Q15270 411 aaPredicted RBP30.85■■■□□ 2.53
RBFOX1-219ENST00000569895 MORC1Q86VD1 984 aa30.85■■■□□ 2.53
RBFOX1-219ENST00000569895 SGIP1Q9BQI5 828 aa30.85■■■□□ 2.53
RBFOX1-219ENST00000569895 SMARCC1Q92922 1105 aaPredicted RBP30.83■■■□□ 2.53
RBFOX1-219ENST00000569895 ARXQ96QS3 562 aa30.83■■■□□ 2.53
RBFOX1-219ENST00000569895 FHDC1Q9C0D6 1143 aaPredicted RBP30.82■■■□□ 2.52
RBFOX1-219ENST00000569895 PNPLA7Q6ZV29 1317 aa30.81■■■□□ 2.52
RBFOX1-219ENST00000569895 SYT17Q9BSW7 474 aa30.81■■■□□ 2.52
RBFOX1-219ENST00000569895 POLD1P28340 1107 aa30.8■■■□□ 2.52
RBFOX1-219ENST00000569895 IFNL2Q8IZJ0 200 aa30.8■■■□□ 2.52
RBFOX1-219ENST00000569895 LY75O60449 1722 aa30.79■■■□□ 2.52
RBFOX1-219ENST00000569895 PALLDQ8WX93 1383 aa30.79■■■□□ 2.52
RBFOX1-219ENST00000569895 PLEKHG2Q9H7P9 1386 aa30.78■■■□□ 2.52
RBFOX1-219ENST00000569895 PKD1L3Q7Z443 1732 aa30.76■■■□□ 2.52
RBFOX1-219ENST00000569895 PIGBQ92521 554 aa30.76■■■□□ 2.51
RBFOX1-219ENST00000569895 IGSF1Q8N6C5 1336 aa30.75■■■□□ 2.51
RBFOX1-219ENST00000569895 MSH5O43196 834 aa30.75■■■□□ 2.51
RBFOX1-219ENST00000569895 PHKG2P15735 406 aa30.75■■■□□ 2.51
RBFOX1-219ENST00000569895 YY1P25490 414 aa30.75■■■□□ 2.51
RBFOX1-219ENST00000569895 TMOD3Q9NYL9 352 aa30.75■■■□□ 2.51
RBFOX1-219ENST00000569895 KIF7Q2M1P5 1343 aa30.74■■■□□ 2.51
RBFOX1-219ENST00000569895 FLAD1Q8NFF5 587 aa30.73■■■□□ 2.51
RBFOX1-219ENST00000569895 PLEKHO1Q53GL0 409 aaPredicted RBP30.72■■■□□ 2.51
RBFOX1-219ENST00000569895 QSER1Q2KHR3 1735 aa30.72■■■□□ 2.51
RBFOX1-219ENST00000569895 HSP90AB1P08238 724 aaKnown RBP30.71■■■□□ 2.51
RBFOX1-219ENST00000569895 MAP3K5Q99683 1374 aa30.7■■■□□ 2.51
RBFOX1-219ENST00000569895 AMOTQ4VCS5 1084 aa30.7■■■□□ 2.51
RBFOX1-219ENST00000569895 COL23A1Q86Y22 540 aaPredicted RBP30.7■■■□□ 2.51
RBFOX1-219ENST00000569895 AMER1Q5JTC6 1135 aaPredicted RBP30.69■■■□□ 2.5
RBFOX1-219ENST00000569895 AK7Q96M32 723 aa30.67■■■□□ 2.5
RBFOX1-219ENST00000569895 LOC102724428A0A0B4J2F2 783 aa30.65■■■□□ 2.5
RBFOX1-219ENST00000569895 SIK1P57059 783 aa30.65■■■□□ 2.5
RBFOX1-219ENST00000569895 KLHL34Q8N239 644 aa30.65■■■□□ 2.5
RBFOX1-219ENST00000569895 DCAF5Q96JK2 942 aa30.65■■■□□ 2.5
RBFOX1-219ENST00000569895 ERVV-2B6SEH9 535 aa30.64■■■□□ 2.5
RBFOX1-219ENST00000569895 TOGARAM1Q9Y4F4 1720 aa30.64■■■□□ 2.5
RBFOX1-219ENST00000569895 ASAP1Q9ULH1 1129 aa30.63■■■□□ 2.49
RBFOX1-219ENST00000569895 ITGB4P16144 1822 aa30.63■■■□□ 2.49
RBFOX1-219ENST00000569895 ZNF530Q6P9A1 599 aaPredicted RBP30.62■■■□□ 2.49
RBFOX1-219ENST00000569895 C1orf141Q5JVX7 400 aa30.61■■■□□ 2.49
RBFOX1-219ENST00000569895 SULT6B1Q6IMI4 303 aa30.61■■■□□ 2.49
RBFOX1-219ENST00000569895 C5P01031 1676 aa30.61■■■□□ 2.49
RBFOX1-219ENST00000569895 PER1O15534 1290 aaPredicted RBP30.6■■■□□ 2.49
RBFOX1-219ENST00000569895 IL13P35225 146 aa30.6■■■□□ 2.49
RBFOX1-219ENST00000569895 ATP6V1AP38606 617 aa30.6■■■□□ 2.49
RBFOX1-219ENST00000569895 AEBP1Q8IUX7 1158 aa30.59■■■□□ 2.49
RBFOX1-219ENST00000569895 ATG3Q9NT62 314 aa30.59■■■□□ 2.49
RBFOX1-219ENST00000569895 TUBGCP6Q96RT7 1819 aa30.59■■■□□ 2.49
RBFOX1-219ENST00000569895 MTHFSP49914 203 aa30.58■■■□□ 2.49
RBFOX1-219ENST00000569895 GPR162Q16538 588 aa30.57■■■□□ 2.48
RBFOX1-219ENST00000569895 MSL1Q68DK7 614 aa30.57■■■□□ 2.48
RBFOX1-219ENST00000569895 CABP4P57796 275 aa30.56■■■□□ 2.48
RBFOX1-219ENST00000569895 CC2D1BQ5T0F9 858 aaKnown RBP30.56■■■□□ 2.48
RBFOX1-219ENST00000569895 SSFA2P28290 1259 aa30.55■■■□□ 2.48
RBFOX1-219ENST00000569895 LINC00116Q8NCU8 138 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms