RNA–Protein interactions for RNA: ENST00000569842.5

NUP93-220, Transcript of nucleoporin 93, humanhuman

TSL 5 BASIC

Gene NUP93, Length 2,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-220ENST00000569842 MTHFSDQ2M296 383 aaKnown RBP16.29■□□□□ 0.2
NUP93-220ENST00000569842 PLEKHO1Q53GL0 409 aaPredicted RBP16.29■□□□□ 0.2
NUP93-220ENST00000569842 PHF23Q9BUL5 403 aaPredicted RBP16.29■□□□□ 0.2
NUP93-220ENST00000569842 NEUROD2Q15784 382 aa16.28■□□□□ 0.2
NUP93-220ENST00000569842 BARGINQ6ZT62 677 aa16.28■□□□□ 0.2
NUP93-220ENST00000569842 HNRNPUQ00839 825 aaKnown RBP eCLIP16.28■□□□□ 0.2
NUP93-220ENST00000569842 OVOS2A0A0G2JMS6 1433 aa16.28■□□□□ 0.2
NUP93-220ENST00000569842 DISP2A7MBM2 1401 aa16.28■□□□□ 0.2
NUP93-220ENST00000569842 TMPOP42166 694 aaKnown RBP16.27■□□□□ 0.2
NUP93-220ENST00000569842 AMOTQ4VCS5 1084 aa16.27■□□□□ 0.2
NUP93-220ENST00000569842 RGS17Q9UGC6 210 aaPredicted RBP16.27■□□□□ 0.2
NUP93-220ENST00000569842 SALL2Q9Y467 1007 aaPredicted RBP16.27■□□□□ 0.2
NUP93-220ENST00000569842 NFE2L2Q16236 605 aa16.27■□□□□ 0.2
NUP93-220ENST00000569842 CDCA7Q9BWT1 371 aaPredicted RBP16.27■□□□□ 0.2
NUP93-220ENST00000569842 SPG7Q9UQ90 795 aa16.27■□□□□ 0.19
NUP93-220ENST00000569842 GAS2L2Q8NHY3 880 aa16.26■□□□□ 0.19
NUP93-220ENST00000569842 ZCRB1Q8TBF4 217 aaKnown RBP16.26■□□□□ 0.19
NUP93-220ENST00000569842 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.26■□□□□ 0.192e-7■■□□□ 13.3
NUP93-220ENST00000569842 GLI3P10071 1580 aa16.26■□□□□ 0.19
NUP93-220ENST00000569842 RIPK4P57078 832 aa16.25■□□□□ 0.19
NUP93-220ENST00000569842 ZNF530Q6P9A1 599 aaPredicted RBP16.25■□□□□ 0.19
NUP93-220ENST00000569842 PLEKHG2Q9H7P9 1386 aa16.25■□□□□ 0.19
NUP93-220ENST00000569842 A0A0G2JS52 829 aa16.25■□□□□ 0.19
NUP93-220ENST00000569842 MYT1Q01538 1121 aa16.25■□□□□ 0.19
NUP93-220ENST00000569842 PARP4Q9UKK3 1724 aaKnown RBP16.25■□□□□ 0.19
NUP93-220ENST00000569842 EXOC5O00471 708 aa16.24■□□□□ 0.19
NUP93-220ENST00000569842 RBM6P78332 1123 aaKnown RBP16.23■□□□□ 0.19
NUP93-220ENST00000569842 DDB1Q16531 1140 aa16.23■□□□□ 0.19
NUP93-220ENST00000569842 C1orf141Q5JVX7 400 aa16.23■□□□□ 0.19
NUP93-220ENST00000569842 POTEAQ6S8J7 498 aa16.23■□□□□ 0.19
NUP93-220ENST00000569842 DDX54Q8TDD1 881 aaKnown RBP16.23■□□□□ 0.19
NUP93-220ENST00000569842 CYP27B1O15528 508 aa16.22■□□□□ 0.19
NUP93-220ENST00000569842 WNK3Q9BYP7 1800 aa16.22■□□□□ 0.19
NUP93-220ENST00000569842 PCDH11XQ9BZA7 1347 aa16.22■□□□□ 0.19
NUP93-220ENST00000569842 PCDH11YQ9BZA8 1340 aa16.22■□□□□ 0.19
NUP93-220ENST00000569842 ONECUT3O60422 494 aaPredicted RBP16.22■□□□□ 0.19
NUP93-220ENST00000569842 PKD1L3Q7Z443 1732 aa16.21■□□□□ 0.19
NUP93-220ENST00000569842 GNAT3A8MTJ3 354 aa16.21■□□□□ 0.19
NUP93-220ENST00000569842 PHKG2P15735 406 aa16.21■□□□□ 0.19
NUP93-220ENST00000569842 AKAP4Q5JQC9 854 aa16.21■□□□□ 0.19
NUP93-220ENST00000569842 TRIM35Q9UPQ4 493 aa16.21■□□□□ 0.19
NUP93-220ENST00000569842 RXRBP28702 533 aa16.21■□□□□ 0.19
NUP93-220ENST00000569842 IFNL2Q8IZJ0 200 aa16.21■□□□□ 0.19
NUP93-220ENST00000569842 MAP3K5Q99683 1374 aa16.2■□□□□ 0.18
NUP93-220ENST00000569842 SEPT12Q8IYM1 358 aa16.2■□□□□ 0.18
NUP93-220ENST00000569842 NGEFQ8N5V2 710 aa16.2■□□□□ 0.18
NUP93-220ENST00000569842 TNS2Q63HR2 1409 aa16.2■□□□□ 0.18
NUP93-220ENST00000569842 DCTN1Q14203 1278 aa16.19■□□□□ 0.18
NUP93-220ENST00000569842 RTF1Q92541 710 aaKnown RBP16.19■□□□□ 0.18
NUP93-220ENST00000569842 LMOD3Q0VAK6 560 aa16.19■□□□□ 0.18
NUP93-220ENST00000569842 CCDC27Q2M243 656 aa16.19■□□□□ 0.18
NUP93-220ENST00000569842 NCBP3Q53F19 620 aaKnown RBP16.19■□□□□ 0.18
NUP93-220ENST00000569842 MCM10Q7L590 875 aa16.19■□□□□ 0.18
NUP93-220ENST00000569842 WWC1Q8IX03 1113 aa16.19■□□□□ 0.18
NUP93-220ENST00000569842 MPRIPQ6WCQ1 1025 aa16.18■□□□□ 0.18
NUP93-220ENST00000569842 THSD7AQ9UPZ6 1657 aa16.18■□□□□ 0.18
NUP93-220ENST00000569842 LRRC37A3O60309 1634 aa16.18■□□□□ 0.18
NUP93-220ENST00000569842 THUMPD2Q9BTF0 503 aaKnown RBP16.18■□□□□ 0.18
NUP93-220ENST00000569842 HTATSF1O43719 755 aaKnown RBP16.18■□□□□ 0.18
NUP93-220ENST00000569842 PDE3BQ13370 1112 aa16.17■□□□□ 0.18
NUP93-220ENST00000569842 LGR6Q9HBX8 967 aa16.17■□□□□ 0.18
NUP93-220ENST00000569842 ZBED9Q6R2W3 1325 aa16.17■□□□□ 0.18
NUP93-220ENST00000569842 MARCH10Q8NA82 808 aaPredicted RBP16.17■□□□□ 0.18
NUP93-220ENST00000569842 IL17REQ8NFR9 667 aa16.17■□□□□ 0.18
NUP93-220ENST00000569842 DLG5Q8TDM6 1919 aa16.17■□□□□ 0.18
NUP93-220ENST00000569842 SHANK3Q9BYB0 1731 aa16.17■□□□□ 0.18
NUP93-220ENST00000569842 HSP90AB1P08238 724 aaKnown RBP16.16■□□□□ 0.18
NUP93-220ENST00000569842 RNMTO43148 476 aaKnown RBP16.15■□□□□ 0.18
NUP93-220ENST00000569842 DCAF5Q96JK2 942 aa16.15■□□□□ 0.18
NUP93-220ENST00000569842 ZNF521Q96K83 1311 aa16.15■□□□□ 0.18
NUP93-220ENST00000569842 NKX1-1Q15270 411 aaPredicted RBP16.15■□□□□ 0.18
NUP93-220ENST00000569842 KDM6AO15550 1401 aaPredicted RBP16.14■□□□□ 0.17
NUP93-220ENST00000569842 WDR63Q8IWG1 891 aa16.13■□□□□ 0.17
NUP93-220ENST00000569842 CEMIPQ8WUJ3 1361 aa16.13■□□□□ 0.17
NUP93-220ENST00000569842 FAM182BQ5T319 152 aa16.12■□□□□ 0.17
NUP93-220ENST00000569842 RGS12O14924 1447 aa16.12■□□□□ 0.17
NUP93-220ENST00000569842 CALD1Q05682 793 aaKnown RBP16.11■□□□□ 0.17
NUP93-220ENST00000569842 GOLGA2Q08379 1002 aa16.11■□□□□ 0.17
NUP93-220ENST00000569842 TEFQ10587 303 aa16.11■□□□□ 0.17
NUP93-220ENST00000569842 KRT27Q7Z3Y8 459 aa16.11■□□□□ 0.17
NUP93-220ENST00000569842 CDCA7LQ96GN5 454 aa16.11■□□□□ 0.17
NUP93-220ENST00000569842 SPINK5Q9NQ38 1064 aaPredicted RBP16.1■□□□□ 0.17
NUP93-220ENST00000569842 LAS1LQ9Y4W2 734 aaKnown RBP16.1■□□□□ 0.17
NUP93-220ENST00000569842 ERVV-2B6SEH9 535 aa16.09■□□□□ 0.17
NUP93-220ENST00000569842 CABP4P57796 275 aa16.09■□□□□ 0.17
NUP93-220ENST00000569842 SLC52A2Q9HAB3 445 aa16.09■□□□□ 0.17
NUP93-220ENST00000569842 IL16Q14005 1332 aa16.09■□□□□ 0.17
NUP93-220ENST00000569842 NFATC2IPQ8NCF5 419 aa16.09■□□□□ 0.17
NUP93-220ENST00000569842 ADAMTS7Q9UKP4 1686 aa16.09■□□□□ 0.17
NUP93-220ENST00000569842 TAF7Q15545 349 aaPredicted RBP16.09■□□□□ 0.17
NUP93-220ENST00000569842 ACSBG1Q96GR2 724 aa16.09■□□□□ 0.17
NUP93-220ENST00000569842 MIS18AQ9NYP9 233 aa16.08■□□□□ 0.16
NUP93-220ENST00000569842 SCN11AQ9UI33 1791 aa16.08■□□□□ 0.16
NUP93-220ENST00000569842 BRWD3Q6RI45 1802 aa16.08■□□□□ 0.16
NUP93-220ENST00000569842 SYTL4Q96C24 671 aaPredicted RBP16.08■□□□□ 0.16
NUP93-220ENST00000569842 IFT57Q9NWB7 429 aa16.08■□□□□ 0.16
NUP93-220ENST00000569842 PRIM1P49642 420 aaKnown RBP16.07■□□□□ 0.16
NUP93-220ENST00000569842 GNAI1P63096 354 aa16.07■□□□□ 0.16
NUP93-220ENST00000569842 CFAP44Q96MT7 982 aa16.07■□□□□ 0.16
NUP93-220ENST00000569842 E9PSI1 815 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms