RNA–Protein interactions for RNA: ENST00000569772.1

HERC2-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 5

Gene HERC2, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-212ENST00000569772 NUDCQ9Y266 331 aa16.03■□□□□ 0.16
HERC2-212ENST00000569772 SHANK3Q9BYB0 1731 aa16.02■□□□□ 0.16
HERC2-212ENST00000569772 SULT6B1Q6IMI4 303 aa16.02■□□□□ 0.16
HERC2-212ENST00000569772 AEBP1Q8IUX7 1158 aa16.02■□□□□ 0.16
HERC2-212ENST00000569772 MARCH10Q8NA82 808 aaPredicted RBP16.01■□□□□ 0.15
HERC2-212ENST00000569772 ZCRB1Q8TBF4 217 aaKnown RBP16.01■□□□□ 0.15
HERC2-212ENST00000569772 PCDH11XQ9BZA7 1347 aa16■□□□□ 0.15
HERC2-212ENST00000569772 PCDH11YQ9BZA8 1340 aa16■□□□□ 0.15
HERC2-212ENST00000569772 FAM196AQ6ZSG2 479 aa16■□□□□ 0.15
HERC2-212ENST00000569772 SPG7Q9UQ90 795 aa15.99■□□□□ 0.15
HERC2-212ENST00000569772 U2SURPO15042 1029 aaKnown RBP15.98■□□□□ 0.15
HERC2-212ENST00000569772 AMOTQ4VCS5 1084 aa15.98■□□□□ 0.15
HERC2-212ENST00000569772 RSPH6AQ9H0K4 717 aa15.98■□□□□ 0.15
HERC2-212ENST00000569772 SOCS7O14512 581 aa15.97■□□□□ 0.15
HERC2-212ENST00000569772 CYP27B1O15528 508 aa15.97■□□□□ 0.15
HERC2-212ENST00000569772 FCHSD2O94868 740 aa15.97■□□□□ 0.15
HERC2-212ENST00000569772 HMOX1P09601 288 aa15.97■□□□□ 0.15
HERC2-212ENST00000569772 NKX1-1Q15270 411 aaPredicted RBP15.97■□□□□ 0.15
HERC2-212ENST00000569772 U2AF1L5P0DN76 240 aaPredicted RBP15.96■□□□□ 0.15
HERC2-212ENST00000569772 U2AF1Q01081 240 aaKnown RBP eCLIP15.96■□□□□ 0.15
HERC2-212ENST00000569772 PLEKHO1Q53GL0 409 aaPredicted RBP15.96■□□□□ 0.15
HERC2-212ENST00000569772 FAM182BQ5T319 152 aa15.96■□□□□ 0.15
HERC2-212ENST00000569772 CCDC125Q86Z20 511 aa15.96■□□□□ 0.15
HERC2-212ENST00000569772 UPF1Q92900 1129 aaKnown RBP eCLIP15.96■□□□□ 0.15
HERC2-212ENST00000569772 PHKG2P15735 406 aa15.94■□□□□ 0.14
HERC2-212ENST00000569772 IFNL2Q8IZJ0 200 aa15.94■□□□□ 0.14
HERC2-212ENST00000569772 DDX54Q8TDD1 881 aaKnown RBP15.94■□□□□ 0.14
HERC2-212ENST00000569772 PRKAR2BP31323 418 aa15.93■□□□□ 0.14
HERC2-212ENST00000569772 PLEKHF1Q96S99 279 aa15.93■□□□□ 0.14
HERC2-212ENST00000569772 EP400Q96L91 3159 aa15.92■□□□□ 0.14
HERC2-212ENST00000569772 NHSQ6T4R5 1651 aa15.92■□□□□ 0.14
HERC2-212ENST00000569772 TNS1Q9HBL0 1735 aaKnown RBP15.91■□□□□ 0.14
HERC2-212ENST00000569772 HSP90AB1P08238 724 aaKnown RBP15.91■□□□□ 0.14
HERC2-212ENST00000569772 CCDC184Q52MB2 194 aa15.91■□□□□ 0.14
HERC2-212ENST00000569772 AKAP4Q5JQC9 854 aa15.91■□□□□ 0.14
HERC2-212ENST00000569772 ZNF530Q6P9A1 599 aaPredicted RBP15.91■□□□□ 0.14
HERC2-212ENST00000569772 BCL11BQ9C0K0 894 aaPredicted RBP15.91■□□□□ 0.14
HERC2-212ENST00000569772 PNNQ9H307 717 aaKnown RBP15.91■□□□□ 0.14
HERC2-212ENST00000569772 SBF2Q86WG5 1849 aa15.9■□□□□ 0.14
HERC2-212ENST00000569772 MTHFSDQ2M296 383 aaKnown RBP15.9■□□□□ 0.14
HERC2-212ENST00000569772 DIEXFQ68CQ4 756 aaKnown RBP15.9■□□□□ 0.14
HERC2-212ENST00000569772 GAS2L2Q8NHY3 880 aa15.9■□□□□ 0.14
HERC2-212ENST00000569772 ADAMTS7Q9UKP4 1686 aa15.89■□□□□ 0.13
HERC2-212ENST00000569772 KDM6AO15550 1401 aaPredicted RBP15.89■□□□□ 0.13
HERC2-212ENST00000569772 WDR43Q15061 677 aaKnown RBP eCLIP15.89■□□□□ 0.13
HERC2-212ENST00000569772 DCAF5Q96JK2 942 aa15.89■□□□□ 0.13
HERC2-212ENST00000569772 PHACTR3Q96KR7 559 aa15.89■□□□□ 0.13
HERC2-212ENST00000569772 DOT1LQ8TEK3 1739 aa15.88■□□□□ 0.13
HERC2-212ENST00000569772 TOGARAM1Q9Y4F4 1720 aa15.88■□□□□ 0.13
HERC2-212ENST00000569772 TRIM37O94972 964 aa15.88■□□□□ 0.13
HERC2-212ENST00000569772 C1orf141Q5JVX7 400 aa15.88■□□□□ 0.13
HERC2-212ENST00000569772 PNISRQ8TF01 805 aaKnown RBP15.88■□□□□ 0.13
HERC2-212ENST00000569772 MRC1P22897 1456 aa15.87■□□□□ 0.13
HERC2-212ENST00000569772 MRS2Q9HD23 443 aa15.87■□□□□ 0.13
HERC2-212ENST00000569772 ADAMTS8Q9UP79 889 aa15.87■□□□□ 0.13
HERC2-212ENST00000569772 MAP3K5Q99683 1374 aa15.87■□□□□ 0.13
HERC2-212ENST00000569772 RGPD3A6NKT7 1758 aaPredicted RBP15.86■□□□□ 0.13
HERC2-212ENST00000569772 RGPD4Q7Z3J3 1758 aa15.86■□□□□ 0.13
HERC2-212ENST00000569772 CCER2I3L3R5 266 aa15.86■□□□□ 0.13
HERC2-212ENST00000569772 KCNQ2O43526 872 aa15.86■□□□□ 0.13
HERC2-212ENST00000569772 ACSBG1Q96GR2 724 aa15.86■□□□□ 0.13
HERC2-212ENST00000569772 ERVV-2B6SEH9 535 aa15.85■□□□□ 0.13
HERC2-212ENST00000569772 PLSCR1O15162 318 aa15.85■□□□□ 0.13
HERC2-212ENST00000569772 PRIM1P49642 420 aaKnown RBP15.85■□□□□ 0.13
HERC2-212ENST00000569772 SF3B2Q13435 895 aaKnown RBP15.85■□□□□ 0.13
HERC2-212ENST00000569772 PTF1AQ7RTS3 328 aa15.85■□□□□ 0.13
HERC2-212ENST00000569772 CEMIPQ8WUJ3 1361 aa15.85■□□□□ 0.13
HERC2-212ENST00000569772 GNAT3A8MTJ3 354 aa15.84■□□□□ 0.13
HERC2-212ENST00000569772 HTATSF1O43719 755 aaKnown RBP15.84■□□□□ 0.13
HERC2-212ENST00000569772 NEFMP07197 916 aa15.84■□□□□ 0.13
HERC2-212ENST00000569772 RUNDC1Q96C34 613 aa15.84■□□□□ 0.13
HERC2-212ENST00000569772 RNMTO43148 476 aaKnown RBP15.83■□□□□ 0.12
HERC2-212ENST00000569772 APBA3O96018 575 aa15.83■□□□□ 0.12
HERC2-212ENST00000569772 BAG6P46379 1132 aa15.83■□□□□ 0.12
HERC2-212ENST00000569772 MAPK8IP3Q9UPT6 1336 aa15.83■□□□□ 0.12
HERC2-212ENST00000569772 NFE2L2Q16236 605 aa15.82■□□□□ 0.12
HERC2-212ENST00000569772 MPRIPQ6WCQ1 1025 aa15.82■□□□□ 0.12
HERC2-212ENST00000569772 CAMKK2Q96RR4 588 aa15.82■□□□□ 0.12
HERC2-212ENST00000569772 SCN11AQ9UI33 1791 aa15.82■□□□□ 0.12
HERC2-212ENST00000569772 BTAF1O14981 1849 aa15.82■□□□□ 0.12
HERC2-212ENST00000569772 PIGBQ92521 554 aa15.81■□□□□ 0.12
HERC2-212ENST00000569772 LGR6Q9HBX8 967 aa15.81■□□□□ 0.12
HERC2-212ENST00000569772 TMPOP42166 694 aaKnown RBP15.8■□□□□ 0.12
HERC2-212ENST00000569772 DEFB132Q7Z7B7 95 aa15.8■□□□□ 0.12
HERC2-212ENST00000569772 IL17REQ8NFR9 667 aa15.8■□□□□ 0.12
HERC2-212ENST00000569772 SYTL4Q96C24 671 aaPredicted RBP15.8■□□□□ 0.12
HERC2-212ENST00000569772 SLC52A2Q9HAB3 445 aa15.8■□□□□ 0.12
HERC2-212ENST00000569772 TMOD3Q9NYL9 352 aa15.8■□□□□ 0.12
HERC2-212ENST00000569772 ITGB4P16144 1822 aa15.8■□□□□ 0.12
HERC2-212ENST00000569772 NCBP3Q53F19 620 aaKnown RBP15.79■□□□□ 0.12
HERC2-212ENST00000569772 CABP4P57796 275 aa15.78■□□□□ 0.12
HERC2-212ENST00000569772 EN1Q05925 392 aaPredicted RBP15.78■□□□□ 0.12
HERC2-212ENST00000569772 CCDC146Q8IYE0 955 aa15.78■□□□□ 0.12
HERC2-212ENST00000569772 RREB1Q92766 1687 aa15.78■□□□□ 0.12
HERC2-212ENST00000569772 EZH2Q15910 746 aaKnown RBP15.77■□□□□ 0.12
HERC2-212ENST00000569772 MIER1Q8N108 512 aa15.77■□□□□ 0.12
HERC2-212ENST00000569772 RTF1Q92541 710 aaKnown RBP15.77■□□□□ 0.12
HERC2-212ENST00000569772 SMARCC1Q92922 1105 aaPredicted RBP15.77■□□□□ 0.12
HERC2-212ENST00000569772 PALLDQ8WX93 1383 aa15.76■□□□□ 0.11
HERC2-212ENST00000569772 PAPPAQ13219 1627 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms