RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 YY1P25490 414 aa18.25■□□□□ 0.51
SPG7-221ENST00000569720 CLSPNQ9HAW4 1339 aa18.24■□□□□ 0.51
SPG7-221ENST00000569720 MEGF6O75095 1541 aa18.24■□□□□ 0.51
SPG7-221ENST00000569720 NBPF6Q5VWK0 638 aa18.24■□□□□ 0.51
SPG7-221ENST00000569720 RAPGEF4Q8WZA2 1011 aa18.24■□□□□ 0.51
SPG7-221ENST00000569720 NBPF4Q96M43 638 aa18.24■□□□□ 0.51
SPG7-221ENST00000569720 FLT4P35916 1363 aa18.23■□□□□ 0.51
SPG7-221ENST00000569720 KIF24Q5T7B8 1368 aa18.23■□□□□ 0.51
SPG7-221ENST00000569720 PRIM1P49642 420 aaKnown RBP18.23■□□□□ 0.51
SPG7-221ENST00000569720 LRRC4BQ9NT99 713 aa18.23■□□□□ 0.51
SPG7-221ENST00000569720 QSER1Q2KHR3 1735 aa18.23■□□□□ 0.51
SPG7-221ENST00000569720 INSRP06213 1382 aa18.22■□□□□ 0.51
SPG7-221ENST00000569720 TATP17735 454 aaPredicted RBP18.22■□□□□ 0.51
SPG7-221ENST00000569720 LY75O60449 1722 aa18.21■□□□□ 0.51
SPG7-221ENST00000569720 ZNF827Q17R98 1081 aa18.21■□□□□ 0.51
SPG7-221ENST00000569720 USHBP1Q8N6Y0 703 aa18.21■□□□□ 0.51
SPG7-221ENST00000569720 NSD3Q9BZ95 1437 aa18.21■□□□□ 0.51
SPG7-221ENST00000569720 HSP90AB2PQ58FF8 381 aa18.2■□□□□ 0.5
SPG7-221ENST00000569720 SLC16A10Q8TF71 515 aa18.19■□□□□ 0.5
SPG7-221ENST00000569720 AKT1S1Q96B36 256 aa18.19■□□□□ 0.5
SPG7-221ENST00000569720 FHDC1Q9C0D6 1143 aaPredicted RBP18.19■□□□□ 0.5
SPG7-221ENST00000569720 ARXQ96QS3 562 aa18.18■□□□□ 0.5
SPG7-221ENST00000569720 SGIP1Q9BQI5 828 aa18.18■□□□□ 0.5
SPG7-221ENST00000569720 SYT17Q9BSW7 474 aa18.18■□□□□ 0.5
SPG7-221ENST00000569720 CARD14Q9BXL6 1004 aa18.18■□□□□ 0.5
SPG7-221ENST00000569720 MAP2P11137 1827 aaKnown RBP18.17■□□□□ 0.5
SPG7-221ENST00000569720 TFCP2L1Q9NZI6 479 aa18.17■□□□□ 0.5
SPG7-221ENST00000569720 PCDH11XQ9BZA7 1347 aa18.17■□□□□ 0.5
SPG7-221ENST00000569720 PCDH11YQ9BZA8 1340 aa18.17■□□□□ 0.5
SPG7-221ENST00000569720 NSD2O96028 1365 aa18.17■□□□□ 0.5
SPG7-221ENST00000569720 TUBGCP6Q96RT7 1819 aa18.16■□□□□ 0.5
SPG7-221ENST00000569720 CCNL1Q9UK58 526 aaPredicted RBP18.16■□□□□ 0.5
SPG7-221ENST00000569720 HMGB2P26583 209 aaKnown RBP18.15■□□□□ 0.5
SPG7-221ENST00000569720 POLD1P28340 1107 aa18.15■□□□□ 0.5
SPG7-221ENST00000569720 EMILIN1Q9Y6C2 1016 aa18.15■□□□□ 0.5
SPG7-221ENST00000569720 ANKRD26Q9UPS8 1709 aa18.15■□□□□ 0.5
SPG7-221ENST00000569720 PPM1GO15355 546 aaPredicted RBP18.14■□□□□ 0.49
SPG7-221ENST00000569720 KCNQ4P56696 695 aa18.14■□□□□ 0.49
SPG7-221ENST00000569720 POLR3GLQ9BT43 218 aa18.14■□□□□ 0.49
SPG7-221ENST00000569720 PNPLA7Q6ZV29 1317 aa18.14■□□□□ 0.49
SPG7-221ENST00000569720 MAP3K5Q99683 1374 aa18.13■□□□□ 0.49
SPG7-221ENST00000569720 COL24A1Q17RW2 1714 aa18.12■□□□□ 0.49
SPG7-221ENST00000569720 PKD1L3Q7Z443 1732 aa18.12■□□□□ 0.49
SPG7-221ENST00000569720 CHD4Q14839 1912 aa18.12■□□□□ 0.49
SPG7-221ENST00000569720 ITGB4P16144 1822 aa18.12■□□□□ 0.49
SPG7-221ENST00000569720 WASHC2AQ641Q2 1341 aa18.11■□□□□ 0.49
SPG7-221ENST00000569720 C5P01031 1676 aa18.11■□□□□ 0.49
SPG7-221ENST00000569720 CYP27B1O15528 508 aa18.1■□□□□ 0.49
SPG7-221ENST00000569720 EIF4G2P78344 907 aaKnown RBP eCLIP18.1■□□□□ 0.49
SPG7-221ENST00000569720 MPRIPQ6WCQ1 1025 aa18.1■□□□□ 0.49
SPG7-221ENST00000569720 KLHL34Q8N239 644 aa18.1■□□□□ 0.49
SPG7-221ENST00000569720 SPG7Q9UQ90 795 aa18.1■□□□□ 0.49
SPG7-221ENST00000569720 MSH5O43196 834 aa18.09■□□□□ 0.49
SPG7-221ENST00000569720 TAF1LQ8IZX4 1826 aa18.09■□□□□ 0.49
SPG7-221ENST00000569720 NCAPD2Q15021 1401 aa18.08■□□□□ 0.49
SPG7-221ENST00000569720 SMARCC1Q92922 1105 aaPredicted RBP18.08■□□□□ 0.48
SPG7-221ENST00000569720 TOGARAM1Q9Y4F4 1720 aa18.08■□□□□ 0.48
SPG7-221ENST00000569720 PALLDQ8WX93 1383 aa18.07■□□□□ 0.48
SPG7-221ENST00000569720 POLKQ9UBT6 870 aa18.07■□□□□ 0.48
SPG7-221ENST00000569720 FLAD1Q8NFF5 587 aa18.06■□□□□ 0.48
SPG7-221ENST00000569720 EYA1Q99502 592 aa18.06■□□□□ 0.48
SPG7-221ENST00000569720 UTRNP46939 3433 aa18.05■□□□□ 0.48
SPG7-221ENST00000569720 HSPA5P11021 654 aaKnown RBP18.05■□□□□ 0.48
SPG7-221ENST00000569720 NKX1-1Q15270 411 aaPredicted RBP18.05■□□□□ 0.48
SPG7-221ENST00000569720 GPR162Q16538 588 aa18.05■□□□□ 0.48
SPG7-221ENST00000569720 COL23A1Q86Y22 540 aaPredicted RBP18.05■□□□□ 0.48
SPG7-221ENST00000569720 CCER1Q8TC90 406 aaPredicted RBP18.05■□□□□ 0.48
SPG7-221ENST00000569720 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.05■□□□□ 0.48
SPG7-221ENST00000569720 TNNT2P45379 298 aaPredicted RBP18.04■□□□□ 0.48
SPG7-221ENST00000569720 C4BP0C0L5 1744 aa18.02■□□□□ 0.48
SPG7-221ENST00000569720 IFNL2Q8IZJ0 200 aa18.02■□□□□ 0.48
SPG7-221ENST00000569720 PIGBQ92521 554 aa18.02■□□□□ 0.48
SPG7-221ENST00000569720 EIF4A2Q14240 407 aaKnown RBP18.01■□□□□ 0.47
SPG7-221ENST00000569720 PELP1Q8IZL8 1130 aaKnown RBP18.01■□□□□ 0.47
SPG7-221ENST00000569720 AK7Q96M32 723 aa18.01■□□□□ 0.47
SPG7-221ENST00000569720 PANK3Q9H999 370 aa18.01■□□□□ 0.47
SPG7-221ENST00000569720 TMOD3Q9NYL9 352 aa18.01■□□□□ 0.47
SPG7-221ENST00000569720 PLEKHG2Q9H7P9 1386 aa18.01■□□□□ 0.47
SPG7-221ENST00000569720 ZNF784Q8NCA9 323 aaPredicted RBP18■□□□□ 0.47
SPG7-221ENST00000569720 PHKG2P15735 406 aa17.99■□□□□ 0.47
SPG7-221ENST00000569720 MSL1Q68DK7 614 aa17.99■□□□□ 0.47
SPG7-221ENST00000569720 UBR3Q6ZT12 1888 aa17.99■□□□□ 0.47
SPG7-221ENST00000569720 LOC102724428A0A0B4J2F2 783 aa17.97■□□□□ 0.47
SPG7-221ENST00000569720 SIK1P57059 783 aa17.97■□□□□ 0.47
SPG7-221ENST00000569720 MORC1Q86VD1 984 aa17.97■□□□□ 0.47
SPG7-221ENST00000569720 NLGN2Q8NFZ4 835 aa17.97■□□□□ 0.47
SPG7-221ENST00000569720 IGSF1Q8N6C5 1336 aa17.97■□□□□ 0.47
SPG7-221ENST00000569720 HSP90AB1P08238 724 aaKnown RBP17.95■□□□□ 0.46
SPG7-221ENST00000569720 PLEKHO1Q53GL0 409 aaPredicted RBP17.95■□□□□ 0.46
SPG7-221ENST00000569720 KNSTRNQ9Y448 316 aa17.95■□□□□ 0.46
SPG7-221ENST00000569720 GRIN3BO60391 1043 aa17.94■□□□□ 0.46
SPG7-221ENST00000569720 PHF14O94880 888 aa17.94■□□□□ 0.46
SPG7-221ENST00000569720 SSFA2P28290 1259 aa17.94■□□□□ 0.46
SPG7-221ENST00000569720 ATP6V1AP38606 617 aa17.94■□□□□ 0.46
SPG7-221ENST00000569720 ASAP1Q9ULH1 1129 aa17.94■□□□□ 0.46
SPG7-221ENST00000569720 CD2APQ9Y5K6 639 aa17.94■□□□□ 0.46
SPG7-221ENST00000569720 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.93■□□□□ 0.46
SPG7-221ENST00000569720 AMOTQ4VCS5 1084 aa17.93■□□□□ 0.46
SPG7-221ENST00000569720 ERVV-2B6SEH9 535 aa17.92■□□□□ 0.46
SPG7-221ENST00000569720 LINC00116Q8NCU8 138 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms