RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 SENP3-EIF4A1A0A087X0R7 540 aa8.31□□□□□ -1.08
CNOT1-216ENST00000569240 ADCY5O95622 1261 aa8.31□□□□□ -1.08
CNOT1-216ENST00000569240 DDX58O95786 925 aaKnown RBP8.31□□□□□ -1.08
CNOT1-216ENST00000569240 NAP1L1P55209 391 aaKnown RBP8.31□□□□□ -1.08
CNOT1-216ENST00000569240 ODF2Q5BJF6 829 aa8.31□□□□□ -1.08
CNOT1-216ENST00000569240 CROCCP2Q86T23 111 aa8.3□□□□□ -1.08
CNOT1-216ENST00000569240 PIBF1Q8WXW3 757 aa8.3□□□□□ -1.08
CNOT1-216ENST00000569240 TAF4BQ92750 862 aa8.3□□□□□ -1.08
CNOT1-216ENST00000569240 KIF5BP33176 963 aa8.3□□□□□ -1.08
CNOT1-216ENST00000569240 DIAPH1O60610 1272 aaKnown RBP8.3□□□□□ -1.08
CNOT1-216ENST00000569240 URI1O94763 535 aaPredicted RBP8.3□□□□□ -1.08
CNOT1-216ENST00000569240 ATF7IPQ6VMQ6 1270 aa8.3□□□□□ -1.08
CNOT1-216ENST00000569240 FMNL2Q96PY5 1086 aa8.3□□□□□ -1.08
CNOT1-216ENST00000569240 NKTRP30414 1462 aaKnown RBP8.3□□□□□ -1.08
CNOT1-216ENST00000569240 CCT4P50991 539 aaKnown RBP8.3□□□□□ -1.08
CNOT1-216ENST00000569240 RALYLQ86SE5 291 aaKnown RBP8.3□□□□□ -1.08
CNOT1-216ENST00000569240 PPP1R9BQ96SB3 815 aa8.3□□□□□ -1.08
CNOT1-216ENST00000569240 IBTKQ9P2D0 1353 aaPredicted RBP8.3□□□□□ -1.08
CNOT1-216ENST00000569240 GOLIM4O00461 696 aa8.3□□□□□ -1.08
CNOT1-216ENST00000569240 MAP2K1Q02750 393 aaPredicted RBP8.3□□□□□ -1.08
CNOT1-216ENST00000569240 ZSCAN23Q3MJ62 389 aa8.3□□□□□ -1.08
CNOT1-216ENST00000569240 TRIM34Q9BYJ4 488 aa8.3□□□□□ -1.08
CNOT1-216ENST00000569240 ELP1O95163 1332 aa8.29□□□□□ -1.08
CNOT1-216ENST00000569240 MAP2K2P36507 400 aa8.29□□□□□ -1.08
CNOT1-216ENST00000569240 LARP1BQ659C4 914 aaKnown RBP8.29□□□□□ -1.08
CNOT1-216ENST00000569240 PLCD4Q9BRC7 762 aa8.29□□□□□ -1.08
CNOT1-216ENST00000569240 FYB1O15117 783 aa8.29□□□□□ -1.08
CNOT1-216ENST00000569240 KIF1CO43896 1103 aaKnown RBP8.29□□□□□ -1.08
CNOT1-216ENST00000569240 ALDH1L2Q3SY69 923 aa8.29□□□□□ -1.08
CNOT1-216ENST00000569240 RNF168Q8IYW5 571 aaPredicted RBP8.29□□□□□ -1.08
CNOT1-216ENST00000569240 USO1O60763 962 aaKnown RBP8.29□□□□□ -1.08
CNOT1-216ENST00000569240 SLFN5Q08AF3 891 aa8.29□□□□□ -1.08
CNOT1-216ENST00000569240 G3BP1Q13283 466 aaKnown RBP eCLIP8.29□□□□□ -1.081e-6■■■□□ 16.5
CNOT1-216ENST00000569240 WASF1Q92558 559 aa8.29□□□□□ -1.08
CNOT1-216ENST00000569240 ERICH2A1L162 156 aa8.29□□□□□ -1.08
CNOT1-216ENST00000569240 CLASRPQ8N2M8 674 aaKnown RBP8.29□□□□□ -1.08
CNOT1-216ENST00000569240 ANKS4BQ8N8V4 417 aa8.29□□□□□ -1.08
CNOT1-216ENST00000569240 GOLGA1Q92805 767 aa8.29□□□□□ -1.08
CNOT1-216ENST00000569240 RAB3GAP1Q15042 981 aa8.29□□□□□ -1.08
CNOT1-216ENST00000569240 TTC14Q96N46 770 aa8.29□□□□□ -1.08
CNOT1-216ENST00000569240 MYO1BO43795 1136 aa8.29□□□□□ -1.08
CNOT1-216ENST00000569240 SEPT6Q14141 434 aa8.29□□□□□ -1.08
CNOT1-216ENST00000569240 KIF4BQ2VIQ3 1234 aa8.29□□□□□ -1.08
CNOT1-216ENST00000569240 PANK1Q8TE04 598 aa8.29□□□□□ -1.08
CNOT1-216ENST00000569240 SEPT7Q16181 437 aaKnown RBP8.28□□□□□ -1.08
CNOT1-216ENST00000569240 OTUD6BQ8N6M0 293 aa8.28□□□□□ -1.08
CNOT1-216ENST00000569240 BANK1Q8NDB2 785 aa8.28□□□□□ -1.08
CNOT1-216ENST00000569240 TOP1P11387 765 aaKnown RBP8.28□□□□□ -1.08
CNOT1-216ENST00000569240 HDXQ7Z353 690 aa8.28□□□□□ -1.08
CNOT1-216ENST00000569240 CEP131Q9UPN4 1083 aa8.28□□□□□ -1.08
CNOT1-216ENST00000569240 CAPN2P17655 700 aa8.28□□□□□ -1.08
CNOT1-216ENST00000569240 SART3Q15020 963 aaKnown RBP8.28□□□□□ -1.08
CNOT1-216ENST00000569240 PLPPR3Q6T4P5 718 aa8.28□□□□□ -1.08
CNOT1-216ENST00000569240 SLC4A10Q6U841 1118 aa8.28□□□□□ -1.08
CNOT1-216ENST00000569240 CCDC9Q9Y3X0 531 aaKnown RBP8.28□□□□□ -1.08
CNOT1-216ENST00000569240 LRRFIP2Q9Y608 721 aaKnown RBP8.28□□□□□ -1.08
CNOT1-216ENST00000569240 MARCH6O60337 910 aa8.28□□□□□ -1.08
CNOT1-216ENST00000569240 TAOK3Q9H2K8 898 aa8.28□□□□□ -1.08
CNOT1-216ENST00000569240 PHAXQ9H814 394 aaKnown RBP8.28□□□□□ -1.08
CNOT1-216ENST00000569240 MRVI1Q9Y6F6 885 aa8.28□□□□□ -1.08
CNOT1-216ENST00000569240 CASKIN1Q8WXD9 1431 aa8.28□□□□□ -1.08
CNOT1-216ENST00000569240 CCDC196A0A1B0GTZ2 297 aa8.27□□□□□ -1.08
CNOT1-216ENST00000569240 MX1P20591 662 aa8.27□□□□□ -1.08
CNOT1-216ENST00000569240 RBBP5Q15291 538 aaKnown RBP8.27□□□□□ -1.08
CNOT1-216ENST00000569240 EFCAB2Q5VUJ9 269 aa8.27□□□□□ -1.08
CNOT1-216ENST00000569240 INTS4Q96HW7 963 aaKnown RBP8.27□□□□□ -1.08
CNOT1-216ENST00000569240 ERCC3P19447 782 aa8.27□□□□□ -1.09
CNOT1-216ENST00000569240 AP1ARQ63HQ0 302 aa8.27□□□□□ -1.09
CNOT1-216ENST00000569240 DDX46Q7L014 1031 aaKnown RBP8.27□□□□□ -1.09
CNOT1-216ENST00000569240 SLMAPQ14BN4 828 aa8.27□□□□□ -1.09
CNOT1-216ENST00000569240 NBPF8Q3BBV2 869 aa8.27□□□□□ -1.09
CNOT1-216ENST00000569240 CCDC121Q6ZUS5 278 aa8.27□□□□□ -1.09
CNOT1-216ENST00000569240 RPAINQ86UA6 219 aa8.27□□□□□ -1.09
CNOT1-216ENST00000569240 LMNTD2Q8IXW0 634 aa8.27□□□□□ -1.09
CNOT1-216ENST00000569240 PPP2R1AP30153 589 aa8.27□□□□□ -1.09
CNOT1-216ENST00000569240 ATL3Q6DD88 541 aa8.27□□□□□ -1.09
CNOT1-216ENST00000569240 KANK3Q6NY19 840 aa8.27□□□□□ -1.09
CNOT1-216ENST00000569240 HSF2BPO75031 334 aa8.27□□□□□ -1.09
CNOT1-216ENST00000569240 FGFR1OPO95684 399 aaKnown RBP8.27□□□□□ -1.09
CNOT1-216ENST00000569240 SPAG1Q07617 926 aa8.27□□□□□ -1.09
CNOT1-216ENST00000569240 AIMP1Q12904 312 aaKnown RBP8.27□□□□□ -1.09
CNOT1-216ENST00000569240 RNF187Q5TA31 235 aaPredicted RBP8.27□□□□□ -1.09
CNOT1-216ENST00000569240 CCDC30Q5VVM6 783 aa8.27□□□□□ -1.09
CNOT1-216ENST00000569240 CTAGE15A4D2H0 777 aa8.26□□□□□ -1.09
CNOT1-216ENST00000569240 CTAGE8P0CG41 777 aa8.26□□□□□ -1.09
CNOT1-216ENST00000569240 CTAGE6Q86UF2 777 aa8.26□□□□□ -1.09
CNOT1-216ENST00000569240 CTAGE4Q8IX94 777 aa8.26□□□□□ -1.09
CNOT1-216ENST00000569240 IFT74Q96LB3 600 aa8.26□□□□□ -1.09
CNOT1-216ENST00000569240 ADAMTS8Q9UP79 889 aa8.26□□□□□ -1.09
CNOT1-216ENST00000569240 RIPK4P57078 832 aa8.26□□□□□ -1.09
CNOT1-216ENST00000569240 SPA17Q15506 151 aa8.26□□□□□ -1.09
CNOT1-216ENST00000569240 HSP90AB2PQ58FF8 381 aa8.26□□□□□ -1.09
CNOT1-216ENST00000569240 C16orf45Q96MC5 204 aaPredicted RBP8.26□□□□□ -1.09
CNOT1-216ENST00000569240 ALS2CR12Q96Q35 445 aa8.26□□□□□ -1.09
CNOT1-216ENST00000569240 SF3B2Q13435 895 aaKnown RBP8.26□□□□□ -1.09
CNOT1-216ENST00000569240 HDAC1Q13547 482 aaPredicted RBP8.26□□□□□ -1.09
CNOT1-216ENST00000569240 AMOTL1Q8IY63 956 aa8.26□□□□□ -1.09
CNOT1-216ENST00000569240 ZSCAN16Q9H4T2 348 aaPredicted RBP8.26□□□□□ -1.09
CNOT1-216ENST00000569240 ABCC8Q09428 1581 aa8.26□□□□□ -1.09
CNOT1-216ENST00000569240 NCOA1Q15788 1441 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms