RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 PARD3Q8TEW0 1356 aa8.98□□□□□ -0.97
CDH13-212ENST00000569144 TNS1Q9HBL0 1735 aaKnown RBP8.97□□□□□ -0.97
CDH13-212ENST00000569144 KIF1BO60333 1816 aa8.97□□□□□ -0.97
CDH13-212ENST00000569144 PSME1Q06323 249 aa8.97□□□□□ -0.97
CDH13-212ENST00000569144 CAMKK2Q96RR4 588 aa8.97□□□□□ -0.97
CDH13-212ENST00000569144 ARHGEF10O15013 1369 aa8.97□□□□□ -0.97
CDH13-212ENST00000569144 NRAPQ86VF7 1730 aa8.97□□□□□ -0.97
CDH13-212ENST00000569144 TESPA1A2RU30 521 aaPredicted RBP8.96□□□□□ -0.98
CDH13-212ENST00000569144 FAM83GA6ND36 823 aa8.96□□□□□ -0.98
CDH13-212ENST00000569144 FAM182BQ5T319 152 aa8.96□□□□□ -0.98
CDH13-212ENST00000569144 CDAN1Q8IWY9 1227 aa8.96□□□□□ -0.98
CDH13-212ENST00000569144 FBXW7Q969H0 707 aa8.96□□□□□ -0.98
CDH13-212ENST00000569144 ADAM33Q9BZ11 813 aa8.96□□□□□ -0.98
CDH13-212ENST00000569144 ABCA3Q99758 1704 aa8.96□□□□□ -0.98
CDH13-212ENST00000569144 FMN2Q9NZ56 1722 aa8.96□□□□□ -0.98
CDH13-212ENST00000569144 NINLQ9Y2I6 1382 aa8.96□□□□□ -0.98
CDH13-212ENST00000569144 OSBPP22059 807 aa8.95□□□□□ -0.98
CDH13-212ENST00000569144 WAPLQ7Z5K2 1190 aa8.95□□□□□ -0.98
CDH13-212ENST00000569144 BTG4Q9NY30 223 aa8.95□□□□□ -0.98
CDH13-212ENST00000569144 THSD7AQ9UPZ6 1657 aa8.94□□□□□ -0.98
CDH13-212ENST00000569144 IFFO2Q5TF58 517 aa8.94□□□□□ -0.98
CDH13-212ENST00000569144 BCL2L12Q9HB09 334 aa8.94□□□□□ -0.98
CDH13-212ENST00000569144 PPP1R1BQ9UD71 204 aaPredicted RBP8.94□□□□□ -0.98
CDH13-212ENST00000569144 AXIN2Q9Y2T1 843 aa8.94□□□□□ -0.98
CDH13-212ENST00000569144 SPATA31A5Q5VU36 1347 aa8.94□□□□□ -0.98
CDH13-212ENST00000569144 SPATA31A7Q8IWB4 1347 aa8.94□□□□□ -0.98
CDH13-212ENST00000569144 ABCC11Q96J66 1382 aa8.94□□□□□ -0.98
CDH13-212ENST00000569144 PLEKHH1Q9ULM0 1364 aa8.94□□□□□ -0.98
CDH13-212ENST00000569144 NRXN1Q9ULB1 1477 aa8.94□□□□□ -0.98
CDH13-212ENST00000569144 TRIM37O94972 964 aa8.93□□□□□ -0.98
CDH13-212ENST00000569144 PRIM1P49642 420 aaKnown RBP8.93□□□□□ -0.98
CDH13-212ENST00000569144 LMOD2Q6P5Q4 547 aa8.93□□□□□ -0.98
CDH13-212ENST00000569144 POTEEQ6S8J3 1075 aa8.93□□□□□ -0.98
CDH13-212ENST00000569144 FAM196AQ6ZSG2 479 aa8.93□□□□□ -0.98
CDH13-212ENST00000569144 KCNK17Q96T54 332 aa8.93□□□□□ -0.98
CDH13-212ENST00000569144 SPON1Q9HCB6 807 aa8.93□□□□□ -0.98
CDH13-212ENST00000569144 STK26Q9P289 416 aa8.93□□□□□ -0.98
CDH13-212ENST00000569144 RRBP1Q9P2E9 1410 aaKnown RBP8.93□□□□□ -0.98
CDH13-212ENST00000569144 PPLO60437 1756 aa8.93□□□□□ -0.98
CDH13-212ENST00000569144 COL14A1Q05707 1796 aaKnown RBP8.92□□□□□ -0.98
CDH13-212ENST00000569144 KNDC1Q76NI1 1749 aa8.92□□□□□ -0.98
CDH13-212ENST00000569144 RREB1Q92766 1687 aa8.92□□□□□ -0.98
CDH13-212ENST00000569144 MAP3K7O43318 606 aa8.92□□□□□ -0.98
CDH13-212ENST00000569144 APBA3O96018 575 aa8.92□□□□□ -0.98
CDH13-212ENST00000569144 PBX2P40425 430 aa8.92□□□□□ -0.98
CDH13-212ENST00000569144 PSEN2P49810 448 aa8.92□□□□□ -0.98
CDH13-212ENST00000569144 NBPF8Q3BBV2 869 aa8.92□□□□□ -0.98
CDH13-212ENST00000569144 NBPF14Q5TI25 921 aa8.92□□□□□ -0.98
CDH13-212ENST00000569144 SMYD5Q6GMV2 418 aa8.92□□□□□ -0.98
CDH13-212ENST00000569144 SENP3-EIF4A1A0A087X0R7 540 aa8.91□□□□□ -0.98
CDH13-212ENST00000569144 ARHGAP33O14559 1287 aa8.91□□□□□ -0.98
CDH13-212ENST00000569144 KCNQ2O43526 872 aa8.91□□□□□ -0.98
CDH13-212ENST00000569144 PTPREP23469 700 aa8.91□□□□□ -0.98
CDH13-212ENST00000569144 ZNF784Q8NCA9 323 aaPredicted RBP8.91□□□□□ -0.98
CDH13-212ENST00000569144 ADGRF5Q8IZF2 1346 aa8.9□□□□□ -0.98
CDH13-212ENST00000569144 ITGAEP38570 1179 aa8.9□□□□□ -0.98
CDH13-212ENST00000569144 TSR1Q2NL82 804 aaKnown RBP8.9□□□□□ -0.98
CDH13-212ENST00000569144 SIRT1Q96EB6 747 aa8.9□□□□□ -0.98
CDH13-212ENST00000569144 KRTAP3-3Q9BYR6 98 aa8.9□□□□□ -0.98
CDH13-212ENST00000569144 KRTAP3-2Q9BYR7 98 aa8.9□□□□□ -0.98
CDH13-212ENST00000569144 NUP188Q5SRE5 1749 aa8.9□□□□□ -0.98
CDH13-212ENST00000569144 YTHDC2Q9H6S0 1430 aaKnown RBP8.89□□□□□ -0.99
CDH13-212ENST00000569144 SPATA31A1Q5TZJ5 1347 aa8.89□□□□□ -0.99
CDH13-212ENST00000569144 C6orf132Q5T0Z8 1188 aa8.89□□□□□ -0.99
CDH13-212ENST00000569144 IFT172Q9UG01 1749 aa8.88□□□□□ -0.99
CDH13-212ENST00000569144 TULP1O00294 542 aaPredicted RBP8.88□□□□□ -0.99
CDH13-212ENST00000569144 TMEM132EQ6IEE7 984 aa8.88□□□□□ -0.99
CDH13-212ENST00000569144 PCDH10Q9P2E7 1040 aa8.88□□□□□ -0.99
CDH13-212ENST00000569144 ANKARQ7Z5J8 1434 aa8.88□□□□□ -0.99
CDH13-212ENST00000569144 CAMTA1Q9Y6Y1 1673 aa8.88□□□□□ -0.99
CDH13-212ENST00000569144 ANKRD30BQ9BXX2 1392 aa8.87□□□□□ -0.99
CDH13-212ENST00000569144 COL9A1P20849 921 aa8.87□□□□□ -0.99
CDH13-212ENST00000569144 C1QTNF8P60827 252 aa8.87□□□□□ -0.99
CDH13-212ENST00000569144 RBM26Q5T8P6 1007 aaKnown RBP8.87□□□□□ -0.99
CDH13-212ENST00000569144 DMRTA1Q5VZB9 504 aa8.87□□□□□ -0.99
CDH13-212ENST00000569144 CDHR5Q9HBB8 845 aa8.87□□□□□ -0.99
CDH13-212ENST00000569144 PRDM11Q9NQV5 511 aa8.87□□□□□ -0.99
CDH13-212ENST00000569144 TRPM3Q9HCF6 1732 aaPredicted RBP8.87□□□□□ -0.99
CDH13-212ENST00000569144 ALS2Q96Q42 1657 aa8.87□□□□□ -0.99
CDH13-212ENST00000569144 PIK3C2GO75747 1445 aa8.87□□□□□ -0.99
CDH13-212ENST00000569144 PPP1R3GB7ZBB8 358 aa8.86□□□□□ -0.99
CDH13-212ENST00000569144 LSM11P83369 360 aaKnown RBP eCLIP8.86□□□□□ -0.99
CDH13-212ENST00000569144 PMFBP1Q8TBY8 1022 aa8.86□□□□□ -0.99
CDH13-212ENST00000569144 RGPD8O14715 1765 aaPredicted RBP8.86□□□□□ -0.99
CDH13-212ENST00000569144 GPRASP1Q5JY77 1395 aa8.86□□□□□ -0.99
CDH13-212ENST00000569144 PDE3BQ13370 1112 aa8.85□□□□□ -0.99
CDH13-212ENST00000569144 BARGINQ6ZT62 677 aa8.85□□□□□ -0.99
CDH13-212ENST00000569144 ANKRD13DQ6ZTN6 518 aa8.85□□□□□ -0.99
CDH13-212ENST00000569144 SPATA31E1Q6ZUB1 1445 aa8.85□□□□□ -0.99
CDH13-212ENST00000569144 CRYBG1Q9Y4K1 1723 aa8.85□□□□□ -0.99
CDH13-212ENST00000569144 ACIN1Q9UKV3 1341 aaKnown RBP8.84□□□□□ -0.99
CDH13-212ENST00000569144 NRKQ7Z2Y5 1582 aa8.84□□□□□ -0.99
CDH13-212ENST00000569144 KIAA0232Q92628 1395 aa8.84□□□□□ -0.99
CDH13-212ENST00000569144 C11orf95C9JLR9 678 aaPredicted RBP8.83□□□□□ -1
CDH13-212ENST00000569144 RGL3Q3MIN7 710 aa8.83□□□□□ -1
CDH13-212ENST00000569144 PRAM1Q96QH2 718 aa8.83□□□□□ -1
CDH13-212ENST00000569144 STRN4Q9NRL3 753 aa8.83□□□□□ -1
CDH13-212ENST00000569144 DHX57Q6P158 1386 aaKnown RBP8.83□□□□□ -1
CDH13-212ENST00000569144 SSH2Q76I76 1423 aa8.82□□□□□ -1
CDH13-212ENST00000569144 CASZ1Q86V15 1759 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms