RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 KDM5BQ9UGL1 1544 aa12.11□□□□□ -0.47
CDH11-216ENST00000569128 CFAP43Q8NDM7 1665 aa12.1□□□□□ -0.47
CDH11-216ENST00000569128 CCDC18Q5T9S5 1454 aa12.1□□□□□ -0.47
CDH11-216ENST00000569128 KCTD17Q8N5Z5 321 aa12.1□□□□□ -0.47
CDH11-216ENST00000569128 PPP1R12CQ9BZL4 782 aa12.1□□□□□ -0.47
CDH11-216ENST00000569128 ZCCHC11Q5TAX3 1644 aaKnown RBP12.1□□□□□ -0.47
CDH11-216ENST00000569128 MAP3K1Q13233 1512 aa12.1□□□□□ -0.47
CDH11-216ENST00000569128 LRRC9Q6ZRR7 1453 aa12.09□□□□□ -0.47
CDH11-216ENST00000569128 SH3BP2P78314 561 aa12.09□□□□□ -0.47
CDH11-216ENST00000569128 TRIM32Q13049 653 aa12.09□□□□□ -0.47
CDH11-216ENST00000569128 SH3RF1Q7Z6J0 888 aa12.09□□□□□ -0.47
CDH11-216ENST00000569128 BPHLQ86WA6 291 aaPredicted RBP12.09□□□□□ -0.47
CDH11-216ENST00000569128 PALM3A6NDB9 673 aaPredicted RBP12.08□□□□□ -0.48
CDH11-216ENST00000569128 RFX1P22670 979 aa12.08□□□□□ -0.48
CDH11-216ENST00000569128 C4orf48Q5BLP8 95 aa12.08□□□□□ -0.48
CDH11-216ENST00000569128 TFIP11Q9UBB9 837 aaKnown RBP12.08□□□□□ -0.48
CDH11-216ENST00000569128 MTUS2Q5JR59 1369 aa12.07□□□□□ -0.48
CDH11-216ENST00000569128 PLEKHD1A6NEE1 506 aa12.07□□□□□ -0.48
CDH11-216ENST00000569128 CFAP70Q5T0N1 1121 aa12.07□□□□□ -0.48
CDH11-216ENST00000569128 TBC1D9Q6ZT07 1266 aa12.07□□□□□ -0.48
CDH11-216ENST00000569128 PIK3CDO00329 1044 aa12.06□□□□□ -0.48
CDH11-216ENST00000569128 ERFEQ4G0M1 354 aa12.06□□□□□ -0.48
CDH11-216ENST00000569128 CEP126Q9P2H0 1117 aa12.06□□□□□ -0.48
CDH11-216ENST00000569128 DZIP3Q86Y13 1208 aaKnown RBP12.05□□□□□ -0.48
CDH11-216ENST00000569128 CDK11AQ9UQ88 783 aaPredicted RBP12.05□□□□□ -0.48
CDH11-216ENST00000569128 TROQ12816 1431 aaPredicted RBP12.04□□□□□ -0.48
CDH11-216ENST00000569128 LMOD1P29536 600 aaPredicted RBP12.04□□□□□ -0.48
CDH11-216ENST00000569128 SKOR1P84550 965 aa12.04□□□□□ -0.48
CDH11-216ENST00000569128 ZNF592Q92610 1267 aa12.04□□□□□ -0.48
CDH11-216ENST00000569128 ASXL2Q76L83 1435 aa12.03□□□□□ -0.48
CDH11-216ENST00000569128 RPIAP49247 311 aa12.03□□□□□ -0.48
CDH11-216ENST00000569128 MCCD1P59942 119 aaPredicted RBP12.03□□□□□ -0.48
CDH11-216ENST00000569128 EHBP1L1Q8N3D4 1523 aa12.02□□□□□ -0.48
CDH11-216ENST00000569128 ATP9BO43861 1147 aa12.02□□□□□ -0.49
CDH11-216ENST00000569128 SLFNL1Q499Z3 407 aa12.02□□□□□ -0.49
CDH11-216ENST00000569128 IFFO2Q5TF58 517 aa12.02□□□□□ -0.49
CDH11-216ENST00000569128 FAM174AQ8TBP5 190 aa12.02□□□□□ -0.49
CDH11-216ENST00000569128 MAFBQ9Y5Q3 323 aaPredicted RBP12.02□□□□□ -0.49
CDH11-216ENST00000569128 KIF14Q15058 1648 aa12.01□□□□□ -0.49
CDH11-216ENST00000569128 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.01□□□□□ -0.49
CDH11-216ENST00000569128 WNT7BP56706 349 aa12.01□□□□□ -0.49
CDH11-216ENST00000569128 LIAT1Q6ZQX7 453 aa12.01□□□□□ -0.49
CDH11-216ENST00000569128 EMID1Q96A84 441 aaPredicted RBP12.01□□□□□ -0.49
CDH11-216ENST00000569128 SLC10A4Q96EP9 437 aa12.01□□□□□ -0.49
CDH11-216ENST00000569128 C1QTNF2Q9BXJ5 285 aa12.01□□□□□ -0.49
CDH11-216ENST00000569128 CD2BP2O95400 341 aaKnown RBP12□□□□□ -0.49
CDH11-216ENST00000569128 SKIP12755 728 aa12□□□□□ -0.49
CDH11-216ENST00000569128 PHLDB1Q86UU1 1377 aa12□□□□□ -0.49
CDH11-216ENST00000569128 NCOA2Q15596 1464 aa12□□□□□ -0.49
CDH11-216ENST00000569128 WDR7Q9Y4E6 1490 aa12□□□□□ -0.49
CDH11-216ENST00000569128 RNF135Q8IUD6 432 aa11.99□□□□□ -0.49
CDH11-216ENST00000569128 PBXIP1Q96AQ6 731 aa11.99□□□□□ -0.49
CDH11-216ENST00000569128 PLA2G2EQ9NZK7 142 aa11.99□□□□□ -0.49
CDH11-216ENST00000569128 PPP1R15AO75807 674 aaPredicted RBP11.98□□□□□ -0.49
CDH11-216ENST00000569128 PHTF2Q8N3S3 785 aa11.98□□□□□ -0.49
CDH11-216ENST00000569128 NFATC2IPQ8NCF5 419 aa11.98□□□□□ -0.49
CDH11-216ENST00000569128 SUPT6HQ7KZ85 1726 aaKnown RBP11.97□□□□□ -0.49
CDH11-216ENST00000569128 ABCC10Q5T3U5 1492 aa11.97□□□□□ -0.49
CDH11-216ENST00000569128 GIGYF1O75420 1035 aaPredicted RBP11.97□□□□□ -0.49
CDH11-216ENST00000569128 CDCA8Q53HL2 280 aa11.97□□□□□ -0.49
CDH11-216ENST00000569128 USP17L5A8MUK1 530 aa11.96□□□□□ -0.49
CDH11-216ENST00000569128 VARSP26640 1264 aaKnown RBP11.96□□□□□ -0.49
CDH11-216ENST00000569128 SLC19A1P41440 591 aa11.96□□□□□ -0.49
CDH11-216ENST00000569128 SRPK2P78362 688 aaKnown RBP11.96□□□□□ -0.49
CDH11-216ENST00000569128 TRMT44Q8IYL2 757 aaKnown RBP11.96□□□□□ -0.49
CDH11-216ENST00000569128 DEPDC4Q8N2C3 294 aa11.96□□□□□ -0.49
CDH11-216ENST00000569128 EHBP1Q8NDI1 1231 aa11.96□□□□□ -0.49
CDH11-216ENST00000569128 MAPKBP1O60336 1514 aa11.96□□□□□ -0.5
CDH11-216ENST00000569128 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.96□□□□□ -0.5
CDH11-216ENST00000569128 USP17L3A6NCW0 530 aa11.95□□□□□ -0.5
CDH11-216ENST00000569128 USP17L4A6NCW7 530 aa11.95□□□□□ -0.5
CDH11-216ENST00000569128 RC3H1Q5TC82 1133 aaKnown RBP11.95□□□□□ -0.5
CDH11-216ENST00000569128 USP17L2Q6R6M4 530 aa11.95□□□□□ -0.5
CDH11-216ENST00000569128 USP17L1Q7RTZ2 530 aa11.95□□□□□ -0.5
CDH11-216ENST00000569128 AEBP1Q8IUX7 1158 aa11.95□□□□□ -0.5
CDH11-216ENST00000569128 PLPP7Q8NBV4 271 aa11.95□□□□□ -0.5
CDH11-216ENST00000569128 CCNB3Q8WWL7 1395 aa11.94□□□□□ -0.5
CDH11-216ENST00000569128 ACIN1Q9UKV3 1341 aaKnown RBP11.94□□□□□ -0.5
CDH11-216ENST00000569128 TTC37Q6PGP7 1564 aa11.94□□□□□ -0.5
CDH11-216ENST00000569128 TSGA10IPQ3SY00 556 aa11.94□□□□□ -0.5
CDH11-216ENST00000569128 GPATCH8Q9UKJ3 1502 aaKnown RBP11.93□□□□□ -0.5
CDH11-216ENST00000569128 FAM69CQ0P6D2 419 aa11.93□□□□□ -0.5
CDH11-216ENST00000569128 NBPF20Q3BBV1 942 aa11.93□□□□□ -0.5
CDH11-216ENST00000569128 ZNF644Q9H582 1327 aaPredicted RBP11.92□□□□□ -0.5
CDH11-216ENST00000569128 A0A0G2JS52 829 aa11.92□□□□□ -0.5
CDH11-216ENST00000569128 RETREG2Q8NC44 543 aa11.92□□□□□ -0.5
CDH11-216ENST00000569128 CCDC85AQ96PX6 553 aaPredicted RBP11.92□□□□□ -0.5
CDH11-216ENST00000569128 CDV3Q9UKY7 258 aaKnown RBP11.92□□□□□ -0.5
CDH11-216ENST00000569128 MYOM3Q5VTT5 1437 aa11.92□□□□□ -0.5
CDH11-216ENST00000569128 RAB15P59190 212 aa11.91□□□□□ -0.5
CDH11-216ENST00000569128 ARID5BQ14865 1188 aa11.91□□□□□ -0.5
CDH11-216ENST00000569128 PLEKHM2Q8IWE5 1019 aa11.91□□□□□ -0.5
CDH11-216ENST00000569128 KCTD15Q96SI1 283 aaPredicted RBP11.91□□□□□ -0.5
CDH11-216ENST00000569128 VRTNQ9H8Y1 702 aa11.91□□□□□ -0.5
CDH11-216ENST00000569128 CHIC2Q9UKJ5 165 aa11.91□□□□□ -0.5
CDH11-216ENST00000569128 ESPNB1AK53 854 aa11.9□□□□□ -0.5
CDH11-216ENST00000569128 NCOA4Q13772 614 aa11.9□□□□□ -0.5
CDH11-216ENST00000569128 FAM50AQ14320 339 aaKnown RBP11.9□□□□□ -0.5
CDH11-216ENST00000569128 CDC42BPAQ5VT25 1732 aa11.9□□□□□ -0.5
CDH11-216ENST00000569128 FGD6Q6ZV73 1430 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms